RNA–Protein interactions for RNA: ENST00000304621.10

TTC39C-201, Transcript of tetratricopeptide repeat domain 39C, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TTC39C, Length 2,304 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-201ENST00000304621 FAM208AQ9UK61 1670 aaKnown RBP7.56□□□□□ -1.2
TTC39C-201ENST00000304621 CPDO75976 1380 aa7.56□□□□□ -1.2
TTC39C-201ENST00000304621 FANCIQ9NVI1 1328 aa7.55□□□□□ -1.2
TTC39C-201ENST00000304621 PLIN1O60240 522 aa7.55□□□□□ -1.2
TTC39C-201ENST00000304621 COL16A1Q07092 1604 aaPredicted RBP7.55□□□□□ -1.2
TTC39C-201ENST00000304621 ERBB3P21860 1342 aa7.55□□□□□ -1.2
TTC39C-201ENST00000304621 RRP1P56182 461 aaKnown RBP7.55□□□□□ -1.2
TTC39C-201ENST00000304621 MCM10Q7L590 875 aa7.55□□□□□ -1.2
TTC39C-201ENST00000304621 PHLPP1O60346 1717 aa7.54□□□□□ -1.2
TTC39C-201ENST00000304621 IL16Q14005 1332 aa7.54□□□□□ -1.2
TTC39C-201ENST00000304621 ABCC6O95255 1503 aa7.54□□□□□ -1.2
TTC39C-201ENST00000304621 NEFLP07196 543 aa7.53□□□□□ -1.2
TTC39C-201ENST00000304621 NEFMP07197 916 aa7.53□□□□□ -1.2
TTC39C-201ENST00000304621 PIP4K2BP78356 416 aa7.53□□□□□ -1.2
TTC39C-201ENST00000304621 LRRC37A3O60309 1634 aa7.53□□□□□ -1.2
TTC39C-201ENST00000304621 COL22A1Q8NFW1 1626 aaPredicted RBP7.53□□□□□ -1.2
TTC39C-201ENST00000304621 CRB1P82279 1406 aa7.53□□□□□ -1.2
TTC39C-201ENST00000304621 BCAR3O75815 825 aa7.53□□□□□ -1.2
TTC39C-201ENST00000304621 ZNF853P0CG23 659 aa7.53□□□□□ -1.2
TTC39C-201ENST00000304621 EXOSC9Q06265 439 aaKnown RBP7.53□□□□□ -1.2
TTC39C-201ENST00000304621 C20orf194Q5TEA3 1177 aa7.53□□□□□ -1.2
TTC39C-201ENST00000304621 MYT1Q01538 1121 aa7.52□□□□□ -1.2
TTC39C-201ENST00000304621 LAS1LQ9Y4W2 734 aaKnown RBP7.52□□□□□ -1.2
TTC39C-201ENST00000304621 MEGF6O75095 1541 aa7.52□□□□□ -1.21
TTC39C-201ENST00000304621 MYH16Q9H6N6 1097 aa7.52□□□□□ -1.21
TTC39C-201ENST00000304621 PRDM11Q9NQV5 511 aa7.52□□□□□ -1.21
TTC39C-201ENST00000304621 MBIPQ9NS73 344 aa7.52□□□□□ -1.21
TTC39C-201ENST00000304621 COL5A2P05997 1499 aaPredicted RBP7.52□□□□□ -1.21
TTC39C-201ENST00000304621 NLRP2Q9NX02 1062 aa7.51□□□□□ -1.21
TTC39C-201ENST00000304621 UBAP1LF5GYI3 381 aa7.51□□□□□ -1.21
TTC39C-201ENST00000304621 RARSP54136 660 aaKnown RBP7.51□□□□□ -1.21
TTC39C-201ENST00000304621 HAP1P54257 671 aaPredicted RBP7.51□□□□□ -1.21
TTC39C-201ENST00000304621 LMOD3Q0VAK6 560 aa7.51□□□□□ -1.21
TTC39C-201ENST00000304621 TSPYL6Q8N831 410 aa7.51□□□□□ -1.21
TTC39C-201ENST00000304621 IL17REQ8NFR9 667 aa7.51□□□□□ -1.21
TTC39C-201ENST00000304621 GAS2L2Q8NHY3 880 aa7.51□□□□□ -1.21
TTC39C-201ENST00000304621 IFT57Q9NWB7 429 aa7.51□□□□□ -1.21
TTC39C-201ENST00000304621 TNNQ9UQP3 1299 aa7.51□□□□□ -1.21
TTC39C-201ENST00000304621 MAP3K5Q99683 1374 aa7.51□□□□□ -1.21
TTC39C-201ENST00000304621 TOM1O60784 492 aa7.5□□□□□ -1.21
TTC39C-201ENST00000304621 KRT24Q2M2I5 525 aa7.5□□□□□ -1.21
TTC39C-201ENST00000304621 BCL2L13Q9BXK5 485 aa7.5□□□□□ -1.21
TTC39C-201ENST00000304621 MIS18AQ9NYP9 233 aa7.5□□□□□ -1.21
TTC39C-201ENST00000304621 CSB-PGBD3P0DP91 1061 aa7.5□□□□□ -1.21
TTC39C-201ENST00000304621 C8orf58Q8NAV2 365 aa7.5□□□□□ -1.21
TTC39C-201ENST00000304621 EXOC6Q8TAG9 804 aa7.5□□□□□ -1.21
TTC39C-201ENST00000304621 CFAP44Q96MT7 982 aa7.5□□□□□ -1.21
TTC39C-201ENST00000304621 LGR6Q9HBX8 967 aa7.5□□□□□ -1.21
TTC39C-201ENST00000304621 GNAT3A8MTJ3 354 aa7.49□□□□□ -1.21
TTC39C-201ENST00000304621 CHL1O00533 1208 aa7.49□□□□□ -1.21
TTC39C-201ENST00000304621 GNAI1P63096 354 aa7.49□□□□□ -1.21
TTC39C-201ENST00000304621 LARP1Q6PKG0 1096 aaKnown RBP7.49□□□□□ -1.21
TTC39C-201ENST00000304621 CERKQ8TCT0 537 aa7.49□□□□□ -1.21
TTC39C-201ENST00000304621 COL14A1Q05707 1796 aaKnown RBP7.49□□□□□ -1.21
TTC39C-201ENST00000304621 WDR17Q8IZU2 1322 aa7.49□□□□□ -1.21
TTC39C-201ENST00000304621 PKD1L3Q7Z443 1732 aa7.49□□□□□ -1.21
TTC39C-201ENST00000304621 ZNF530Q6P9A1 599 aaPredicted RBP7.49□□□□□ -1.21
TTC39C-201ENST00000304621 CRBNQ96SW2 442 aa7.49□□□□□ -1.21
TTC39C-201ENST00000304621 VIRMAQ69YN4 1812 aaKnown RBP7.48□□□□□ -1.21
TTC39C-201ENST00000304621 PLCH1Q4KWH8 1693 aa7.48□□□□□ -1.21
TTC39C-201ENST00000304621 ADAMTS7Q9UKP4 1686 aa7.48□□□□□ -1.21
TTC39C-201ENST00000304621 CEMIPQ8WUJ3 1361 aa7.48□□□□□ -1.21
TTC39C-201ENST00000304621 ELL2O00472 640 aaPredicted RBP7.48□□□□□ -1.21
TTC39C-201ENST00000304621 CALD1Q05682 793 aaKnown RBP7.48□□□□□ -1.21
TTC39C-201ENST00000304621 PLEKHO1Q53GL0 409 aaPredicted RBP7.48□□□□□ -1.21
TTC39C-201ENST00000304621 SSH1Q8WYL5 1049 aa7.48□□□□□ -1.21
TTC39C-201ENST00000304621 STRN4Q9NRL3 753 aa7.48□□□□□ -1.21
TTC39C-201ENST00000304621 HTATSF1O43719 755 aaKnown RBP7.47□□□□□ -1.21
TTC39C-201ENST00000304621 VAMP4O75379 141 aa7.47□□□□□ -1.21
TTC39C-201ENST00000304621 MPRIPQ6WCQ1 1025 aa7.47□□□□□ -1.21
TTC39C-201ENST00000304621 RTF1Q92541 710 aaKnown RBP7.47□□□□□ -1.21
TTC39C-201ENST00000304621 BTG4Q9NY30 223 aa7.47□□□□□ -1.21
TTC39C-201ENST00000304621 SHANK3Q9BYB0 1731 aa7.47□□□□□ -1.21
TTC39C-201ENST00000304621 NRAPQ86VF7 1730 aa7.47□□□□□ -1.21
TTC39C-201ENST00000304621 TCERG1O14776 1098 aaKnown RBP7.47□□□□□ -1.21
TTC39C-201ENST00000304621 AKAP4Q5JQC9 854 aa7.47□□□□□ -1.21
TTC39C-201ENST00000304621 TOM1L2Q6ZVM7 507 aa7.47□□□□□ -1.21
TTC39C-201ENST00000304621 OVOS2A0A0G2JMS6 1433 aa7.47□□□□□ -1.21
TTC39C-201ENST00000304621 KDM6AO15550 1401 aaPredicted RBP7.47□□□□□ -1.21
TTC39C-201ENST00000304621 SIPA1L3O60292 1781 aaPredicted RBP7.46□□□□□ -1.21
TTC39C-201ENST00000304621 NUTM2BA6NNL0 878 aaPredicted RBP7.46□□□□□ -1.21
TTC39C-201ENST00000304621 NUTM2EB1AL46 878 aaPredicted RBP7.46□□□□□ -1.21
TTC39C-201ENST00000304621 RNMTO43148 476 aaKnown RBP7.46□□□□□ -1.21
TTC39C-201ENST00000304621 ADAMTS2O95450 1211 aa7.46□□□□□ -1.21
TTC39C-201ENST00000304621 RLBP1P12271 317 aa7.46□□□□□ -1.21
TTC39C-201ENST00000304621 AMOTQ4VCS5 1084 aa7.46□□□□□ -1.21
TTC39C-201ENST00000304621 B4GALNT3Q6L9W6 998 aa7.46□□□□□ -1.21
TTC39C-201ENST00000304621 NUTM2AQ8IVF1 878 aaPredicted RBP7.46□□□□□ -1.21
TTC39C-201ENST00000304621 RAPGEF4Q8WZA2 1011 aa7.46□□□□□ -1.21
TTC39C-201ENST00000304621 PARP4Q9UKK3 1724 aaKnown RBP7.46□□□□□ -1.21
TTC39C-201ENST00000304621 KDM3BQ7LBC6 1761 aa7.46□□□□□ -1.22
TTC39C-201ENST00000304621 CYP27B1O15528 508 aa7.46□□□□□ -1.22
TTC39C-201ENST00000304621 KCNQ3O43525 872 aa7.46□□□□□ -1.22
TTC39C-201ENST00000304621 CT47B1P0C2W7 299 aaPredicted RBP7.46□□□□□ -1.22
TTC39C-201ENST00000304621 TATP17735 454 aaPredicted RBP7.46□□□□□ -1.22
TTC39C-201ENST00000304621 TWISTNBQ3B726 338 aaPredicted RBP7.46□□□□□ -1.22
TTC39C-201ENST00000304621 ERICH6BQ5W0A0 696 aa7.46□□□□□ -1.22
TTC39C-201ENST00000304621 PANK1Q8TE04 598 aa7.46□□□□□ -1.22
TTC39C-201ENST00000304621 FRAT1Q92837 279 aaPredicted RBP7.46□□□□□ -1.22
TTC39C-201ENST00000304621 PPP4R2Q9NY27 417 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms