RNA–Protein interactions for RNA: ENST00000304516.11

INO80E-201, Transcript of INO80 complex subunit E, humanhuman

TSL 2 BASIC

Gene INO80E, Length 1,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
INO80E-201ENST00000304516 PARD3Q8TEW0 1356 aa24.17■■□□□ 1.46
INO80E-201ENST00000304516 PSDA5PKW4 1024 aaPredicted RBP24.16■■□□□ 1.46
INO80E-201ENST00000304516 NUP188Q5SRE5 1749 aa24.14■■□□□ 1.46
INO80E-201ENST00000304516 DDX54Q8TDD1 881 aaKnown RBP24.14■■□□□ 1.46
INO80E-201ENST00000304516 KCNQ2O43526 872 aa24.13■■□□□ 1.45
INO80E-201ENST00000304516 ACSBG1Q96GR2 724 aa24.13■■□□□ 1.45
INO80E-201ENST00000304516 SHANK3Q9BYB0 1731 aa24.13■■□□□ 1.45
INO80E-201ENST00000304516 NHSQ6T4R5 1651 aa24.13■■□□□ 1.45
INO80E-201ENST00000304516 KAT6BQ8WYB5 2073 aa24.12■■□□□ 1.45
INO80E-201ENST00000304516 RGPD3A6NKT7 1758 aaPredicted RBP24.11■■□□□ 1.45
INO80E-201ENST00000304516 RGPD4Q7Z3J3 1758 aa24.11■■□□□ 1.45
INO80E-201ENST00000304516 PLSCR1O15162 318 aa24.1■■□□□ 1.45
INO80E-201ENST00000304516 MTHFSP49914 203 aa24.1■■□□□ 1.45
INO80E-201ENST00000304516 R3HDM1Q15032 1099 aaKnown RBP24.1■■□□□ 1.45
INO80E-201ENST00000304516 ZCRB1Q8TBF4 217 aaKnown RBP24.1■■□□□ 1.45
INO80E-201ENST00000304516 RAPGEF4Q8WZA2 1011 aa24.1■■□□□ 1.45
INO80E-201ENST00000304516 EIF4A2Q14240 407 aaKnown RBP24.08■■□□□ 1.45
INO80E-201ENST00000304516 TATP17735 454 aaPredicted RBP24.07■■□□□ 1.44
INO80E-201ENST00000304516 BTAF1O14981 1849 aa24.06■■□□□ 1.44
INO80E-201ENST00000304516 EYA1Q99502 592 aa24.05■■□□□ 1.44
INO80E-201ENST00000304516 NCAPD2Q15021 1401 aa24.05■■□□□ 1.44
INO80E-201ENST00000304516 DOT1LQ8TEK3 1739 aa24.04■■□□□ 1.44
INO80E-201ENST00000304516 PPP2R1AP30153 589 aa24.04■■□□□ 1.44
INO80E-201ENST00000304516 PROM2Q8N271 834 aa24.04■■□□□ 1.44
INO80E-201ENST00000304516 COL3A1P02461 1466 aaPredicted RBP24.02■■□□□ 1.44
INO80E-201ENST00000304516 NBPF14Q5TI25 921 aa24.02■■□□□ 1.44
INO80E-201ENST00000304516 SYTL4Q96C24 671 aaPredicted RBP24.01■■□□□ 1.43
INO80E-201ENST00000304516 IL13P35225 146 aa24■■□□□ 1.43
INO80E-201ENST00000304516 TXNRD1Q16881 649 aa24■■□□□ 1.43
INO80E-201ENST00000304516 PKD1L3Q7Z443 1732 aa24■■□□□ 1.43
INO80E-201ENST00000304516 PRIM1P49642 420 aaKnown RBP24■■□□□ 1.43
INO80E-201ENST00000304516 PCDH11XQ9BZA7 1347 aa23.99■■□□□ 1.43
INO80E-201ENST00000304516 PCDH11YQ9BZA8 1340 aa23.99■■□□□ 1.43
INO80E-201ENST00000304516 ANO8Q9HCE9 1232 aaPredicted RBP23.99■■□□□ 1.43
INO80E-201ENST00000304516 IGSF1Q8N6C5 1336 aa23.98■■□□□ 1.43
INO80E-201ENST00000304516 CYP27B1O15528 508 aa23.96■■□□□ 1.43
INO80E-201ENST00000304516 LRP5O75197 1615 aa23.96■■□□□ 1.43
INO80E-201ENST00000304516 RALBP1Q15311 655 aa23.94■■□□□ 1.42
INO80E-201ENST00000304516 AEBP1Q8IUX7 1158 aa23.94■■□□□ 1.42
INO80E-201ENST00000304516 PRKRIP1Q9H875 184 aaPredicted RBP23.94■■□□□ 1.42
INO80E-201ENST00000304516 DIAPH1O60610 1272 aaKnown RBP23.93■■□□□ 1.42
INO80E-201ENST00000304516 SPG7Q9UQ90 795 aa23.93■■□□□ 1.42
INO80E-201ENST00000304516 TOGARAM1Q9Y4F4 1720 aa23.92■■□□□ 1.42
INO80E-201ENST00000304516 KDRP35968 1356 aa23.89■■□□□ 1.42
INO80E-201ENST00000304516 LRRC4BQ9NT99 713 aa23.89■■□□□ 1.42
INO80E-201ENST00000304516 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.89■■□□□ 1.42
INO80E-201ENST00000304516 PAPPAQ13219 1627 aa23.89■■□□□ 1.41
INO80E-201ENST00000304516 SULT6B1Q6IMI4 303 aa23.88■■□□□ 1.41
INO80E-201ENST00000304516 MYBBP1AQ9BQG0 1328 aaKnown RBP23.88■■□□□ 1.41
INO80E-201ENST00000304516 ITGB4P16144 1822 aa23.88■■□□□ 1.41
INO80E-201ENST00000304516 LY75O60449 1722 aa23.88■■□□□ 1.41
INO80E-201ENST00000304516 KCNQ4P56696 695 aa23.87■■□□□ 1.41
INO80E-201ENST00000304516 PDGFDQ9GZP0 370 aaPredicted RBP23.87■■□□□ 1.41
INO80E-201ENST00000304516 STK32BQ9NY57 414 aa23.87■■□□□ 1.41
INO80E-201ENST00000304516 MPRIPQ6WCQ1 1025 aa23.87■■□□□ 1.41
INO80E-201ENST00000304516 CFAP53Q96M91 514 aa23.87■■□□□ 1.41
INO80E-201ENST00000304516 HMOX1P09601 288 aa23.86■■□□□ 1.41
INO80E-201ENST00000304516 NKX1-1Q15270 411 aaPredicted RBP23.86■■□□□ 1.41
INO80E-201ENST00000304516 SLC15A2Q16348 729 aa23.86■■□□□ 1.41
INO80E-201ENST00000304516 CASZ1Q86V15 1759 aa23.86■■□□□ 1.41
INO80E-201ENST00000304516 PHKG2P15735 406 aa23.85■■□□□ 1.41
INO80E-201ENST00000304516 U2SURPO15042 1029 aaKnown RBP23.84■■□□□ 1.41
INO80E-201ENST00000304516 IFNL2Q8IZJ0 200 aa23.84■■□□□ 1.41
INO80E-201ENST00000304516 SLC27A3Q5K4L6 730 aa23.83■■□□□ 1.41
INO80E-201ENST00000304516 PLEKHG2Q9H7P9 1386 aa23.83■■□□□ 1.41
INO80E-201ENST00000304516 ZNF827Q17R98 1081 aa23.82■■□□□ 1.4
INO80E-201ENST00000304516 PLEKHO1Q53GL0 409 aaPredicted RBP23.81■■□□□ 1.4
INO80E-201ENST00000304516 CCNL1Q9UK58 526 aaPredicted RBP23.81■■□□□ 1.4
INO80E-201ENST00000304516 PIGBQ92521 554 aa23.8■■□□□ 1.4
INO80E-201ENST00000304516 ZNF530Q6P9A1 599 aaPredicted RBP23.79■■□□□ 1.4
INO80E-201ENST00000304516 PALLDQ8WX93 1383 aa23.78■■□□□ 1.4
INO80E-201ENST00000304516 ZBTB7AO95365 584 aa23.78■■□□□ 1.4
INO80E-201ENST00000304516 AMOTQ4VCS5 1084 aa23.78■■□□□ 1.4
INO80E-201ENST00000304516 SPON1Q9HCB6 807 aa23.78■■□□□ 1.4
INO80E-201ENST00000304516 AKT1S1Q96B36 256 aa23.77■■□□□ 1.4
INO80E-201ENST00000304516 NUDCQ9Y266 331 aa23.77■■□□□ 1.4
INO80E-201ENST00000304516 RSPH6AQ9H0K4 717 aa23.76■■□□□ 1.39
INO80E-201ENST00000304516 TMOD3Q9NYL9 352 aa23.76■■□□□ 1.39
INO80E-201ENST00000304516 U2AF1L5P0DN76 240 aaPredicted RBP23.75■■□□□ 1.39
INO80E-201ENST00000304516 U2AF1Q01081 240 aaKnown RBP eCLIP23.75■■□□□ 1.39
INO80E-201ENST00000304516 CCDC184Q52MB2 194 aa23.75■■□□□ 1.39
INO80E-201ENST00000304516 TUBGCP6Q96RT7 1819 aa23.75■■□□□ 1.39
INO80E-201ENST00000304516 C5P01031 1676 aa23.74■■□□□ 1.39
INO80E-201ENST00000304516 ANP32CO43423 234 aa23.74■■□□□ 1.39
INO80E-201ENST00000304516 DCAF5Q96JK2 942 aa23.74■■□□□ 1.39
INO80E-201ENST00000304516 KDM6AO15550 1401 aaPredicted RBP23.74■■□□□ 1.39
INO80E-201ENST00000304516 PRKAR2BP31323 418 aa23.73■■□□□ 1.39
INO80E-201ENST00000304516 C1orf141Q5JVX7 400 aa23.73■■□□□ 1.39
INO80E-201ENST00000304516 SMARCC1Q92922 1105 aaPredicted RBP23.73■■□□□ 1.39
INO80E-201ENST00000304516 TFCP2L1Q9NZI6 479 aa23.73■■□□□ 1.39
INO80E-201ENST00000304516 ASAP1Q9ULH1 1129 aa23.73■■□□□ 1.39
INO80E-201ENST00000304516 ATF5Q9Y2D1 282 aaPredicted RBP23.73■■□□□ 1.39
INO80E-201ENST00000304516 TAF1LQ8IZX4 1826 aa23.73■■□□□ 1.39
INO80E-201ENST00000304516 HSP90AB1P08238 724 aaKnown RBP23.72■■□□□ 1.39
INO80E-201ENST00000304516 PHACTR3Q96KR7 559 aa23.72■■□□□ 1.39
INO80E-201ENST00000304516 QSER1Q2KHR3 1735 aa23.72■■□□□ 1.39
INO80E-201ENST00000304516 MTHFSDQ2M296 383 aaKnown RBP23.71■■□□□ 1.39
INO80E-201ENST00000304516 ERVV-2B6SEH9 535 aa23.7■■□□□ 1.38
INO80E-201ENST00000304516 PPP1R1BQ9UD71 204 aaPredicted RBP23.7■■□□□ 1.38
INO80E-201ENST00000304516 PNPLA7Q6ZV29 1317 aa23.7■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms