RNA–Protein interactions for RNA: ENST00000304465.7

SRGAP2C-201, Transcript of SLIT-ROBO Rho GTPase activating protein 2C, humanhuman

TSL 5 BASIC

Gene SRGAP2C, Length 1,477 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2C-201ENST00000304465 NSD2O96028 1365 aa21.83■■□□□ 1.09
SRGAP2C-201ENST00000304465 POLKQ9UBT6 870 aa21.83■■□□□ 1.08
SRGAP2C-201ENST00000304465 NUP188Q5SRE5 1749 aa21.82■■□□□ 1.08
SRGAP2C-201ENST00000304465 MEGF6O75095 1541 aa21.82■■□□□ 1.08
SRGAP2C-201ENST00000304465 TXNRD1Q16881 649 aa21.82■■□□□ 1.08
SRGAP2C-201ENST00000304465 RGPD3A6NKT7 1758 aaPredicted RBP21.81■■□□□ 1.08
SRGAP2C-201ENST00000304465 RGPD4Q7Z3J3 1758 aa21.81■■□□□ 1.08
SRGAP2C-201ENST00000304465 MORC1Q86VD1 984 aa21.81■■□□□ 1.08
SRGAP2C-201ENST00000304465 SYTL4Q96C24 671 aaPredicted RBP21.81■■□□□ 1.08
SRGAP2C-201ENST00000304465 RGPD2P0DJD1 1756 aa21.8■■□□□ 1.08
SRGAP2C-201ENST00000304465 NHSQ6T4R5 1651 aa21.8■■□□□ 1.08
SRGAP2C-201ENST00000304465 PROM2Q8N271 834 aa21.78■■□□□ 1.08
SRGAP2C-201ENST00000304465 SRCAPQ6ZRS2 3230 aa21.77■■□□□ 1.08
SRGAP2C-201ENST00000304465 PCDH11XQ9BZA7 1347 aa21.77■■□□□ 1.08
SRGAP2C-201ENST00000304465 PCDH11YQ9BZA8 1340 aa21.77■■□□□ 1.08
SRGAP2C-201ENST00000304465 PRIM1P49642 420 aaKnown RBP21.77■■□□□ 1.07
SRGAP2C-201ENST00000304465 STK32BQ9NY57 414 aa21.77■■□□□ 1.07
SRGAP2C-201ENST00000304465 ANKRD26Q9UPS8 1709 aa21.76■■□□□ 1.07
SRGAP2C-201ENST00000304465 LRP5O75197 1615 aa21.76■■□□□ 1.07
SRGAP2C-201ENST00000304465 KAT6BQ8WYB5 2073 aa21.76■■□□□ 1.07
SRGAP2C-201ENST00000304465 MAP2P11137 1827 aaKnown RBP21.75■■□□□ 1.07
SRGAP2C-201ENST00000304465 EYA1Q99502 592 aa21.75■■□□□ 1.07
SRGAP2C-201ENST00000304465 ANO8Q9HCE9 1232 aaPredicted RBP21.75■■□□□ 1.07
SRGAP2C-201ENST00000304465 EIF4A2Q14240 407 aaKnown RBP21.73■■□□□ 1.07
SRGAP2C-201ENST00000304465 SPG7Q9UQ90 795 aa21.73■■□□□ 1.07
SRGAP2C-201ENST00000304465 PER1O15534 1290 aaPredicted RBP21.71■■□□□ 1.07
SRGAP2C-201ENST00000304465 SPON1Q9HCB6 807 aa21.71■■□□□ 1.07
SRGAP2C-201ENST00000304465 SLC15A2Q16348 729 aa21.71■■□□□ 1.07
SRGAP2C-201ENST00000304465 BTAF1O14981 1849 aa21.7■■□□□ 1.07
SRGAP2C-201ENST00000304465 AMER1Q5JTC6 1135 aaPredicted RBP21.7■■□□□ 1.06
SRGAP2C-201ENST00000304465 SLC27A3Q5K4L6 730 aa21.7■■□□□ 1.06
SRGAP2C-201ENST00000304465 NCAPD2Q15021 1401 aa21.69■■□□□ 1.06
SRGAP2C-201ENST00000304465 PPP1R1BQ9UD71 204 aaPredicted RBP21.68■■□□□ 1.06
SRGAP2C-201ENST00000304465 DOT1LQ8TEK3 1739 aa21.67■■□□□ 1.06
SRGAP2C-201ENST00000304465 SHANK3Q9BYB0 1731 aa21.67■■□□□ 1.06
SRGAP2C-201ENST00000304465 CYP27B1O15528 508 aa21.67■■□□□ 1.06
SRGAP2C-201ENST00000304465 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.67■■□□□ 1.06
SRGAP2C-201ENST00000304465 ANP32CO43423 234 aa21.66■■□□□ 1.06
SRGAP2C-201ENST00000304465 CC2D1BQ5T0F9 858 aaKnown RBP21.65■■□□□ 1.06
SRGAP2C-201ENST00000304465 MPRIPQ6WCQ1 1025 aa21.64■■□□□ 1.06
SRGAP2C-201ENST00000304465 LRRC4BQ9NT99 713 aa21.64■■□□□ 1.06
SRGAP2C-201ENST00000304465 IGSF1Q8N6C5 1336 aa21.64■■□□□ 1.06
SRGAP2C-201ENST00000304465 PRKRIP1Q9H875 184 aaPredicted RBP21.64■■□□□ 1.05
SRGAP2C-201ENST00000304465 CNGB1Q14028 1251 aaPredicted RBP21.63■■□□□ 1.05
SRGAP2C-201ENST00000304465 IFNL2Q8IZJ0 200 aa21.63■■□□□ 1.05
SRGAP2C-201ENST00000304465 CCNL1Q9UK58 526 aaPredicted RBP21.63■■□□□ 1.05
SRGAP2C-201ENST00000304465 ZBTB7AO95365 584 aa21.62■■□□□ 1.05
SRGAP2C-201ENST00000304465 PKD1L3Q7Z443 1732 aa21.61■■□□□ 1.05
SRGAP2C-201ENST00000304465 HMGB2P26583 209 aaKnown RBP21.61■■□□□ 1.05
SRGAP2C-201ENST00000304465 NKX1-1Q15270 411 aaPredicted RBP21.61■■□□□ 1.05
SRGAP2C-201ENST00000304465 PDGFDQ9GZP0 370 aaPredicted RBP21.61■■□□□ 1.05
SRGAP2C-201ENST00000304465 PLEKHG2Q9H7P9 1386 aa21.61■■□□□ 1.05
SRGAP2C-201ENST00000304465 MTHFSP49914 203 aa21.6■■□□□ 1.05
SRGAP2C-201ENST00000304465 KCNQ4P56696 695 aa21.6■■□□□ 1.05
SRGAP2C-201ENST00000304465 PLEKHO1Q53GL0 409 aaPredicted RBP21.6■■□□□ 1.05
SRGAP2C-201ENST00000304465 PHKG2P15735 406 aa21.59■■□□□ 1.05
SRGAP2C-201ENST00000304465 ZNF827Q17R98 1081 aa21.59■■□□□ 1.05
SRGAP2C-201ENST00000304465 SMARCC1Q92922 1105 aaPredicted RBP21.59■■□□□ 1.05
SRGAP2C-201ENST00000304465 TFCP2L1Q9NZI6 479 aa21.59■■□□□ 1.05
SRGAP2C-201ENST00000304465 AMOTQ4VCS5 1084 aa21.58■■□□□ 1.05
SRGAP2C-201ENST00000304465 TMOD3Q9NYL9 352 aa21.58■■□□□ 1.05
SRGAP2C-201ENST00000304465 ATF5Q9Y2D1 282 aaPredicted RBP21.58■■□□□ 1.05
SRGAP2C-201ENST00000304465 SULT6B1Q6IMI4 303 aa21.58■■□□□ 1.04
SRGAP2C-201ENST00000304465 AKT1S1Q96B36 256 aa21.58■■□□□ 1.04
SRGAP2C-201ENST00000304465 MTFR1LQ9H019 292 aa21.58■■□□□ 1.04
SRGAP2C-201ENST00000304465 PALLDQ8WX93 1383 aa21.57■■□□□ 1.04
SRGAP2C-201ENST00000304465 NPC1L1Q9UHC9 1359 aa21.57■■□□□ 1.04
SRGAP2C-201ENST00000304465 PAPPAQ13219 1627 aa21.57■■□□□ 1.04
SRGAP2C-201ENST00000304465 CCER2I3L3R5 266 aa21.57■■□□□ 1.04
SRGAP2C-201ENST00000304465 HSP90AB1P08238 724 aaKnown RBP21.57■■□□□ 1.04
SRGAP2C-201ENST00000304465 IL13P35225 146 aa21.57■■□□□ 1.04
SRGAP2C-201ENST00000304465 ZNF530Q6P9A1 599 aaPredicted RBP21.56■■□□□ 1.04
SRGAP2C-201ENST00000304465 PIGBQ92521 554 aa21.56■■□□□ 1.04
SRGAP2C-201ENST00000304465 CASZ1Q86V15 1759 aa21.56■■□□□ 1.04
SRGAP2C-201ENST00000304465 C1orf141Q5JVX7 400 aa21.55■■□□□ 1.04
SRGAP2C-201ENST00000304465 AEBP1Q8IUX7 1158 aa21.55■■□□□ 1.04
SRGAP2C-201ENST00000304465 DCAF5Q96JK2 942 aa21.53■■□□□ 1.04
SRGAP2C-201ENST00000304465 LY75O60449 1722 aa21.52■■□□□ 1.04
SRGAP2C-201ENST00000304465 DIAPH1O60610 1272 aaKnown RBP21.52■■□□□ 1.04
SRGAP2C-201ENST00000304465 MSH5O43196 834 aa21.52■■□□□ 1.03
SRGAP2C-201ENST00000304465 SLC16A10Q8TF71 515 aa21.52■■□□□ 1.03
SRGAP2C-201ENST00000304465 DCAF8L1A6NGE4 600 aa21.51■■□□□ 1.03
SRGAP2C-201ENST00000304465 TOGARAM1Q9Y4F4 1720 aa21.51■■□□□ 1.03
SRGAP2C-201ENST00000304465 PNPLA7Q6ZV29 1317 aa21.5■■□□□ 1.03
SRGAP2C-201ENST00000304465 ERVV-2B6SEH9 535 aa21.5■■□□□ 1.03
SRGAP2C-201ENST00000304465 PTGER2P43116 358 aa21.5■■□□□ 1.03
SRGAP2C-201ENST00000304465 KDRP35968 1356 aa21.5■■□□□ 1.03
SRGAP2C-201ENST00000304465 CCDC184Q52MB2 194 aa21.49■■□□□ 1.03
SRGAP2C-201ENST00000304465 ITGB4P16144 1822 aa21.48■■□□□ 1.03
SRGAP2C-201ENST00000304465 HMOX1P09601 288 aa21.48■■□□□ 1.03
SRGAP2C-201ENST00000304465 CABP4P57796 275 aa21.48■■□□□ 1.03
SRGAP2C-201ENST00000304465 RALBP1Q15311 655 aa21.48■■□□□ 1.03
SRGAP2C-201ENST00000304465 ASAP1Q9ULH1 1129 aa21.48■■□□□ 1.03
SRGAP2C-201ENST00000304465 LOC102724428A0A0B4J2F2 783 aa21.47■■□□□ 1.03
SRGAP2C-201ENST00000304465 POLD1P28340 1107 aa21.47■■□□□ 1.03
SRGAP2C-201ENST00000304465 SIK1P57059 783 aa21.47■■□□□ 1.03
SRGAP2C-201ENST00000304465 AK7Q96M32 723 aa21.47■■□□□ 1.03
SRGAP2C-201ENST00000304465 CFAP53Q96M91 514 aa21.47■■□□□ 1.03
SRGAP2C-201ENST00000304465 FLAD1Q8NFF5 587 aa21.46■■□□□ 1.03
SRGAP2C-201ENST00000304465 U2SURPO15042 1029 aaKnown RBP21.45■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms