RNA–Protein interactions for RNA: ENST00000304004.7

POLR1C-201, Transcript of RNA polymerase I and III subunit C, humanhuman

TSL 1 (best) BASIC

Gene POLR1C, Length 1,280 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1C-201ENST00000304004 SF3B2Q13435 895 aaKnown RBP22.09■■□□□ 1.13
POLR1C-201ENST00000304004 POLKQ9UBT6 870 aa22.09■■□□□ 1.13
POLR1C-201ENST00000304004 NUP188Q5SRE5 1749 aa22.09■■□□□ 1.13
POLR1C-201ENST00000304004 BCL9O00512 1426 aa22.08■■□□□ 1.13
POLR1C-201ENST00000304004 PER1O15534 1290 aaPredicted RBP22.08■■□□□ 1.13
POLR1C-201ENST00000304004 MORC1Q86VD1 984 aa22.08■■□□□ 1.13
POLR1C-201ENST00000304004 NPC1L1Q9UHC9 1359 aa22.08■■□□□ 1.12
POLR1C-201ENST00000304004 PPM1GO15355 546 aaPredicted RBP22.07■■□□□ 1.12
POLR1C-201ENST00000304004 EXOC5O00471 708 aa22.05■■□□□ 1.12
POLR1C-201ENST00000304004 VIRMAQ69YN4 1812 aaKnown RBP22.04■■□□□ 1.12
POLR1C-201ENST00000304004 NBPF6Q5VWK0 638 aa22.04■■□□□ 1.12
POLR1C-201ENST00000304004 MARCH10Q8NA82 808 aaPredicted RBP22.04■■□□□ 1.12
POLR1C-201ENST00000304004 NBPF4Q96M43 638 aa22.04■■□□□ 1.12
POLR1C-201ENST00000304004 ITGB4P16144 1822 aa22.03■■□□□ 1.12
POLR1C-201ENST00000304004 TRIM37O94972 964 aa22.03■■□□□ 1.12
POLR1C-201ENST00000304004 BAG6P46379 1132 aa22.02■■□□□ 1.12
POLR1C-201ENST00000304004 DEFB132Q7Z7B7 95 aa22.02■■□□□ 1.12
POLR1C-201ENST00000304004 USHBP1Q8N6Y0 703 aa22.02■■□□□ 1.12
POLR1C-201ENST00000304004 TOGARAM1Q9Y4F4 1720 aa22.01■■□□□ 1.11
POLR1C-201ENST00000304004 CC2D1BQ5T0F9 858 aaKnown RBP22■■□□□ 1.11
POLR1C-201ENST00000304004 ZEB1P37275 1124 aaPredicted RBP21.99■■□□□ 1.11
POLR1C-201ENST00000304004 EIF4A2Q14240 407 aaKnown RBP21.98■■□□□ 1.11
POLR1C-201ENST00000304004 RAPGEF4Q8WZA2 1011 aa21.98■■□□□ 1.11
POLR1C-201ENST00000304004 PARD3Q8TEW0 1356 aa21.98■■□□□ 1.11
POLR1C-201ENST00000304004 LY75O60449 1722 aa21.95■■□□□ 1.1
POLR1C-201ENST00000304004 EYA1Q99502 592 aa21.95■■□□□ 1.1
POLR1C-201ENST00000304004 COL3A1P02461 1466 aaPredicted RBP21.95■■□□□ 1.1
POLR1C-201ENST00000304004 TATP17735 454 aaPredicted RBP21.94■■□□□ 1.1
POLR1C-201ENST00000304004 EN1Q05925 392 aaPredicted RBP21.94■■□□□ 1.1
POLR1C-201ENST00000304004 ZCRB1Q8TBF4 217 aaKnown RBP21.94■■□□□ 1.1
POLR1C-201ENST00000304004 IGSF1Q8N6C5 1336 aa21.94■■□□□ 1.1
POLR1C-201ENST00000304004 PLEKHG2Q9H7P9 1386 aa21.94■■□□□ 1.1
POLR1C-201ENST00000304004 APBA3O96018 575 aa21.93■■□□□ 1.1
POLR1C-201ENST00000304004 BCL11BQ9C0K0 894 aaPredicted RBP21.93■■□□□ 1.1
POLR1C-201ENST00000304004 PCDH11XQ9BZA7 1347 aa21.92■■□□□ 1.1
POLR1C-201ENST00000304004 PCDH11YQ9BZA8 1340 aa21.92■■□□□ 1.1
POLR1C-201ENST00000304004 DDX54Q8TDD1 881 aaKnown RBP21.91■■□□□ 1.1
POLR1C-201ENST00000304004 MTHFSP49914 203 aa21.9■■□□□ 1.1
POLR1C-201ENST00000304004 CNGB1Q14028 1251 aaPredicted RBP21.9■■□□□ 1.1
POLR1C-201ENST00000304004 CAMKK2Q96RR4 588 aa21.9■■□□□ 1.1
POLR1C-201ENST00000304004 SCN11AQ9UI33 1791 aa21.89■■□□□ 1.1
POLR1C-201ENST00000304004 PTF1AQ7RTS3 328 aa21.89■■□□□ 1.09
POLR1C-201ENST00000304004 EZH2Q15910 746 aaKnown RBP21.88■■□□□ 1.09
POLR1C-201ENST00000304004 KDRP35968 1356 aa21.87■■□□□ 1.09
POLR1C-201ENST00000304004 ACSBG1Q96GR2 724 aa21.87■■□□□ 1.09
POLR1C-201ENST00000304004 PAPPAQ13219 1627 aa21.87■■□□□ 1.09
POLR1C-201ENST00000304004 TAF1LQ8IZX4 1826 aa21.87■■□□□ 1.09
POLR1C-201ENST00000304004 KCNQ2O43526 872 aa21.86■■□□□ 1.09
POLR1C-201ENST00000304004 IL13P35225 146 aa21.85■■□□□ 1.09
POLR1C-201ENST00000304004 TUBGCP6Q96RT7 1819 aa21.85■■□□□ 1.09
POLR1C-201ENST00000304004 QSER1Q2KHR3 1735 aa21.84■■□□□ 1.09
POLR1C-201ENST00000304004 PLSCR1O15162 318 aa21.84■■□□□ 1.09
POLR1C-201ENST00000304004 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.84■■□□□ 1.09
POLR1C-201ENST00000304004 CYP27B1O15528 508 aa21.83■■□□□ 1.09
POLR1C-201ENST00000304004 SPG7Q9UQ90 795 aa21.83■■□□□ 1.09
POLR1C-201ENST00000304004 C5P01031 1676 aa21.82■■□□□ 1.08
POLR1C-201ENST00000304004 LRP5O75197 1615 aa21.82■■□□□ 1.08
POLR1C-201ENST00000304004 AEBP1Q8IUX7 1158 aa21.82■■□□□ 1.08
POLR1C-201ENST00000304004 CASZ1Q86V15 1759 aa21.8■■□□□ 1.08
POLR1C-201ENST00000304004 DIAPH1O60610 1272 aaKnown RBP21.8■■□□□ 1.08
POLR1C-201ENST00000304004 SULT6B1Q6IMI4 303 aa21.79■■□□□ 1.08
POLR1C-201ENST00000304004 ADAMTS7Q9UKP4 1686 aa21.79■■□□□ 1.08
POLR1C-201ENST00000304004 PPP2R1AP30153 589 aa21.78■■□□□ 1.08
POLR1C-201ENST00000304004 SYTL4Q96C24 671 aaPredicted RBP21.78■■□□□ 1.08
POLR1C-201ENST00000304004 PRIM1P49642 420 aaKnown RBP21.77■■□□□ 1.08
POLR1C-201ENST00000304004 DDX10Q13206 875 aaKnown RBP21.77■■□□□ 1.08
POLR1C-201ENST00000304004 NKX1-1Q15270 411 aaPredicted RBP21.76■■□□□ 1.07
POLR1C-201ENST00000304004 CFAP53Q96M91 514 aa21.76■■□□□ 1.07
POLR1C-201ENST00000304004 DLG5Q8TDM6 1919 aa21.76■■□□□ 1.07
POLR1C-201ENST00000304004 PHKG2P15735 406 aa21.75■■□□□ 1.07
POLR1C-201ENST00000304004 IFNL2Q8IZJ0 200 aa21.75■■□□□ 1.07
POLR1C-201ENST00000304004 TXNRD1Q16881 649 aa21.74■■□□□ 1.07
POLR1C-201ENST00000304004 AMOTQ4VCS5 1084 aa21.74■■□□□ 1.07
POLR1C-201ENST00000304004 PLEKHO1Q53GL0 409 aaPredicted RBP21.74■■□□□ 1.07
POLR1C-201ENST00000304004 ZNF831Q5JPB2 1677 aa21.74■■□□□ 1.07
POLR1C-201ENST00000304004 SIPA1L3O60292 1781 aaPredicted RBP21.74■■□□□ 1.07
POLR1C-201ENST00000304004 KDM6AO15550 1401 aaPredicted RBP21.73■■□□□ 1.07
POLR1C-201ENST00000304004 PSDA5PKW4 1024 aaPredicted RBP21.73■■□□□ 1.07
POLR1C-201ENST00000304004 HMOX1P09601 288 aa21.73■■□□□ 1.07
POLR1C-201ENST00000304004 ZNF530Q6P9A1 599 aaPredicted RBP21.73■■□□□ 1.07
POLR1C-201ENST00000304004 PROM2Q8N271 834 aa21.73■■□□□ 1.07
POLR1C-201ENST00000304004 R3HDM1Q15032 1099 aaKnown RBP21.72■■□□□ 1.07
POLR1C-201ENST00000304004 NBPF14Q5TI25 921 aa21.71■■□□□ 1.07
POLR1C-201ENST00000304004 COL5A3P25940 1745 aaPredicted RBP21.71■■□□□ 1.07
POLR1C-201ENST00000304004 U2SURPO15042 1029 aaKnown RBP21.7■■□□□ 1.06
POLR1C-201ENST00000304004 ANO8Q9HCE9 1232 aaPredicted RBP21.7■■□□□ 1.06
POLR1C-201ENST00000304004 MRC1P22897 1456 aa21.7■■□□□ 1.06
POLR1C-201ENST00000304004 UBR3Q6ZT12 1888 aa21.69■■□□□ 1.06
POLR1C-201ENST00000304004 HSP90AB1P08238 724 aaKnown RBP21.69■■□□□ 1.06
POLR1C-201ENST00000304004 CICQ96RK0 1608 aaPredicted RBP21.69■■□□□ 1.06
POLR1C-201ENST00000304004 C1orf141Q5JVX7 400 aa21.68■■□□□ 1.06
POLR1C-201ENST00000304004 C4BP0C0L5 1744 aa21.68■■□□□ 1.06
POLR1C-201ENST00000304004 UBR2Q8IWV8 1755 aa21.67■■□□□ 1.06
POLR1C-201ENST00000304004 PALLDQ8WX93 1383 aa21.67■■□□□ 1.06
POLR1C-201ENST00000304004 RALBP1Q15311 655 aa21.67■■□□□ 1.06
POLR1C-201ENST00000304004 SLC27A3Q5K4L6 730 aa21.67■■□□□ 1.06
POLR1C-201ENST00000304004 MPRIPQ6WCQ1 1025 aa21.67■■□□□ 1.06
POLR1C-201ENST00000304004 DCAF5Q96JK2 942 aa21.67■■□□□ 1.06
POLR1C-201ENST00000304004 SRCAPQ6ZRS2 3230 aa21.66■■□□□ 1.06
POLR1C-201ENST00000304004 TMOD3Q9NYL9 352 aa21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms