RNA–Protein interactions for RNA: ENST00000303904.7

COPS6-201, Transcript of COP9 signalosome subunit 6, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COPS6, Length 1,432 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS6-201ENST00000303904 ZNF316A6NFI3 1004 aaPredicted RBP38.55■■■■□ 3.76
COPS6-201ENST00000303904 PCDH11XQ9BZA7 1347 aa38.55■■■■□ 3.76
COPS6-201ENST00000303904 PCDH11YQ9BZA8 1340 aa38.55■■■■□ 3.76
COPS6-201ENST00000303904 IL13P35225 146 aa38.55■■■■□ 3.76
COPS6-201ENST00000303904 SPG7Q9UQ90 795 aa38.55■■■■□ 3.76
COPS6-201ENST00000303904 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP38.53■■■■□ 3.767e-6■■□□□ 12.8
COPS6-201ENST00000303904 PPP2R1AP30153 589 aa38.52■■■■□ 3.76
COPS6-201ENST00000303904 BCL11BQ9C0K0 894 aaPredicted RBP38.52■■■■□ 3.76
COPS6-201ENST00000303904 APBA3O96018 575 aa38.51■■■■□ 3.76
COPS6-201ENST00000303904 PARD3Q8TEW0 1356 aa38.5■■■■□ 3.75
COPS6-201ENST00000303904 RALBP1Q15311 655 aa38.49■■■■□ 3.75
COPS6-201ENST00000303904 DEFB132Q7Z7B7 95 aa38.49■■■■□ 3.75
COPS6-201ENST00000303904 SULT6B1Q6IMI4 303 aa38.47■■■■□ 3.75
COPS6-201ENST00000303904 TNS1Q9HBL0 1735 aaKnown RBP38.47■■■■□ 3.75
COPS6-201ENST00000303904 NUDCQ9Y266 331 aa38.45■■■■□ 3.75
COPS6-201ENST00000303904 SBF2Q86WG5 1849 aa38.44■■■■□ 3.74
COPS6-201ENST00000303904 KDRP35968 1356 aa38.43■■■■□ 3.74
COPS6-201ENST00000303904 AMOTQ4VCS5 1084 aa38.43■■■■□ 3.74
COPS6-201ENST00000303904 PKD1L3Q7Z443 1732 aa38.42■■■■□ 3.74
COPS6-201ENST00000303904 EN1Q05925 392 aaPredicted RBP38.42■■■■□ 3.74
COPS6-201ENST00000303904 PLEKHO1Q53GL0 409 aaPredicted RBP38.42■■■■□ 3.74
COPS6-201ENST00000303904 ACSBG1Q96GR2 724 aa38.42■■■■□ 3.74
COPS6-201ENST00000303904 SHANK3Q9BYB0 1731 aa38.4■■■■□ 3.74
COPS6-201ENST00000303904 U2SURPO15042 1029 aaKnown RBP38.4■■■■□ 3.74
COPS6-201ENST00000303904 COL3A1P02461 1466 aaPredicted RBP38.39■■■■□ 3.74
COPS6-201ENST00000303904 AEBP1Q8IUX7 1158 aa38.38■■■■□ 3.74
COPS6-201ENST00000303904 NHSQ6T4R5 1651 aa38.38■■■■□ 3.73
COPS6-201ENST00000303904 IFNL2Q8IZJ0 200 aa38.38■■■■□ 3.73
COPS6-201ENST00000303904 KAT6BQ8WYB5 2073 aa38.36■■■■□ 3.73
COPS6-201ENST00000303904 PLSCR1O15162 318 aa38.36■■■■□ 3.73
COPS6-201ENST00000303904 CYP27B1O15528 508 aa38.36■■■■□ 3.73
COPS6-201ENST00000303904 SYTL4Q96C24 671 aaPredicted RBP38.36■■■■□ 3.73
COPS6-201ENST00000303904 KCNQ2O43526 872 aa38.34■■■■□ 3.73
COPS6-201ENST00000303904 HMOX1P09601 288 aa38.34■■■■□ 3.73
COPS6-201ENST00000303904 CAMKK2Q96RR4 588 aa38.33■■■■□ 3.73
COPS6-201ENST00000303904 HSP90AB1P08238 724 aaKnown RBP38.32■■■■□ 3.73
COPS6-201ENST00000303904 EZH2Q15910 746 aaKnown RBP38.32■■■■□ 3.73
COPS6-201ENST00000303904 PHKG2P15735 406 aa38.3■■■■□ 3.72
COPS6-201ENST00000303904 PRIM1P49642 420 aaKnown RBP38.3■■■■□ 3.72
COPS6-201ENST00000303904 C1orf141Q5JVX7 400 aa38.3■■■■□ 3.72
COPS6-201ENST00000303904 MYBBP1AQ9BQG0 1328 aaKnown RBP38.3■■■■□ 3.72
COPS6-201ENST00000303904 NKX1-1Q15270 411 aaPredicted RBP38.29■■■■□ 3.72
COPS6-201ENST00000303904 ZNF530Q6P9A1 599 aaPredicted RBP38.29■■■■□ 3.72
COPS6-201ENST00000303904 PTF1AQ7RTS3 328 aa38.29■■■■□ 3.72
COPS6-201ENST00000303904 DOT1LQ8TEK3 1739 aa38.28■■■■□ 3.72
COPS6-201ENST00000303904 RGPD3A6NKT7 1758 aaPredicted RBP38.27■■■■□ 3.72
COPS6-201ENST00000303904 RGPD4Q7Z3J3 1758 aa38.27■■■■□ 3.72
COPS6-201ENST00000303904 U2AF1L5P0DN76 240 aaPredicted RBP38.25■■■■□ 3.71
COPS6-201ENST00000303904 U2AF1Q01081 240 aaKnown RBP eCLIP38.25■■■■□ 3.71
COPS6-201ENST00000303904 PRKRIP1Q9H875 184 aaPredicted RBP38.22■■■■□ 3.71
COPS6-201ENST00000303904 DCAF5Q96JK2 942 aa38.21■■■■□ 3.71
COPS6-201ENST00000303904 BTAF1O14981 1849 aa38.21■■■■□ 3.71
COPS6-201ENST00000303904 NBPF14Q5TI25 921 aa38.2■■■■□ 3.71
COPS6-201ENST00000303904 MPRIPQ6WCQ1 1025 aa38.19■■■■□ 3.7
COPS6-201ENST00000303904 FCHSD2O94868 740 aa38.18■■■■□ 3.7
COPS6-201ENST00000303904 AKAP4Q5JQC9 854 aa38.17■■■■□ 3.7
COPS6-201ENST00000303904 NEFMP07197 916 aa38.16■■■■□ 3.7
COPS6-201ENST00000303904 TXNRD1Q16881 649 aa38.16■■■■□ 3.7
COPS6-201ENST00000303904 TMOD3Q9NYL9 352 aa38.16■■■■□ 3.7
COPS6-201ENST00000303904 RREB1Q92766 1687 aa38.15■■■■□ 3.7
COPS6-201ENST00000303904 GAS2L2Q8NHY3 880 aa38.15■■■■□ 3.7
COPS6-201ENST00000303904 ERVV-2B6SEH9 535 aa38.14■■■■□ 3.7
COPS6-201ENST00000303904 PNNQ9H307 717 aaKnown RBP38.14■■■■□ 3.7
COPS6-201ENST00000303904 PRKAR2BP31323 418 aa38.13■■■■□ 3.7
COPS6-201ENST00000303904 RSPH6AQ9H0K4 717 aa38.13■■■■□ 3.7
COPS6-201ENST00000303904 HMGB2P26583 209 aaKnown RBP38.12■■■■□ 3.69
COPS6-201ENST00000303904 MTHFSDQ2M296 383 aaKnown RBP38.11■■■■□ 3.69
COPS6-201ENST00000303904 SLC27A3Q5K4L6 730 aa38.11■■■■□ 3.69
COPS6-201ENST00000303904 SMARCC1Q92922 1105 aaPredicted RBP38.11■■■■□ 3.69
COPS6-201ENST00000303904 TOGARAM1Q9Y4F4 1720 aa38.09■■■■□ 3.69
COPS6-201ENST00000303904 ANP32CO43423 234 aa38.08■■■■□ 3.69
COPS6-201ENST00000303904 NUP188Q5SRE5 1749 aa38.07■■■■□ 3.69
COPS6-201ENST00000303904 CABP4P57796 275 aa38.07■■■■□ 3.69
COPS6-201ENST00000303904 PROM2Q8N271 834 aa38.07■■■■□ 3.69
COPS6-201ENST00000303904 PIGBQ92521 554 aa38.07■■■■□ 3.69
COPS6-201ENST00000303904 ITGB4P16144 1822 aa38.06■■■■□ 3.68
COPS6-201ENST00000303904 KDM6AO15550 1401 aaPredicted RBP38.04■■■■□ 3.68
COPS6-201ENST00000303904 PALLDQ8WX93 1383 aa38.03■■■■□ 3.68
COPS6-201ENST00000303904 WDR43Q15061 677 aaKnown RBP eCLIP38.02■■■■□ 3.685e-7■■□□□ 13.9
COPS6-201ENST00000303904 GNAT3A8MTJ3 354 aa38.01■■■■□ 3.68
COPS6-201ENST00000303904 MAP3K5Q99683 1374 aa38.01■■■■□ 3.67
COPS6-201ENST00000303904 STK32BQ9NY57 414 aa38■■■■□ 3.67
COPS6-201ENST00000303904 CCNL1Q9UK58 526 aaPredicted RBP38■■■■□ 3.67
COPS6-201ENST00000303904 R3HDM1Q15032 1099 aaKnown RBP37.99■■■■□ 3.67
COPS6-201ENST00000303904 PHACTR3Q96KR7 559 aa37.99■■■■□ 3.67
COPS6-201ENST00000303904 MAPK8IP3Q9UPT6 1336 aa37.98■■■■□ 3.67
COPS6-201ENST00000303904 LY75O60449 1722 aa37.97■■■■□ 3.67
COPS6-201ENST00000303904 RNMTO43148 476 aaKnown RBP37.96■■■■□ 3.67
COPS6-201ENST00000303904 PSDA5PKW4 1024 aaPredicted RBP37.95■■■■□ 3.67
COPS6-201ENST00000303904 NFATC2IPQ8NCF5 419 aa37.95■■■■□ 3.67
COPS6-201ENST00000303904 RTF1Q92541 710 aaKnown RBP37.95■■■■□ 3.67
COPS6-201ENST00000303904 SCN11AQ9UI33 1791 aa37.94■■■■□ 3.66
COPS6-201ENST00000303904 SLC52A2Q9HAB3 445 aa37.94■■■■□ 3.66
COPS6-201ENST00000303904 LRRC4BQ9NT99 713 aa37.94■■■■□ 3.66
COPS6-201ENST00000303904 LGR6Q9HBX8 967 aa37.92■■■■□ 3.66
COPS6-201ENST00000303904 ASAP1Q9ULH1 1129 aa37.92■■■■□ 3.66
COPS6-201ENST00000303904 ATG3Q9NT62 314 aa37.91■■■■□ 3.66
COPS6-201ENST00000303904 TEFQ10587 303 aa37.9■■■■□ 3.66
COPS6-201ENST00000303904 SLC15A2Q16348 729 aa37.9■■■■□ 3.66
COPS6-201ENST00000303904 ANO8Q9HCE9 1232 aaPredicted RBP37.89■■■■□ 3.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms