RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 ZSCAN23Q3MJ62 389 aa16.01■□□□□ 0.15
CASC4-201ENST00000299957 TRIM5Q9C035 493 aa16.01■□□□□ 0.15
CASC4-201ENST00000299957 ABCA5Q8WWZ7 1642 aa16.01■□□□□ 0.15
CASC4-201ENST00000299957 GCC2Q8IWJ2 1684 aa16.01■□□□□ 0.15
CASC4-201ENST00000299957 GOLGA6L6A8MZA4 724 aa16.01■□□□□ 0.15
CASC4-201ENST00000299957 WASLO00401 505 aaPredicted RBP16.01■□□□□ 0.15
CASC4-201ENST00000299957 CCT4P50991 539 aaKnown RBP16.01■□□□□ 0.15
CASC4-201ENST00000299957 PLEKHM2Q8IWE5 1019 aa16.01■□□□□ 0.15
CASC4-201ENST00000299957 PLA2R1Q13018 1463 aa16■□□□□ 0.15
CASC4-201ENST00000299957 TRMT2AQ8IZ69 625 aaKnown RBP16■□□□□ 0.15
CASC4-201ENST00000299957 NEXNQ0ZGT2 675 aa16■□□□□ 0.15
CASC4-201ENST00000299957 ESCO1Q5FWF5 840 aa16■□□□□ 0.15
CASC4-201ENST00000299957 PRPF40BQ6NWY9 871 aaKnown RBP16■□□□□ 0.15
CASC4-201ENST00000299957 TMX3Q96JJ7 454 aa16■□□□□ 0.15
CASC4-201ENST00000299957 TFIP11Q9UBB9 837 aaKnown RBP16■□□□□ 0.15
CASC4-201ENST00000299957 CCDC39Q9UFE4 941 aa16■□□□□ 0.15
CASC4-201ENST00000299957 CD109Q6YHK3 1445 aa16■□□□□ 0.15
CASC4-201ENST00000299957 CWC22Q9HCG8 908 aaKnown RBP16■□□□□ 0.15
CASC4-201ENST00000299957 ADGRL2O95490 1459 aa16■□□□□ 0.15
CASC4-201ENST00000299957 CCDC8Q9H0W5 538 aaPredicted RBP15.99■□□□□ 0.15
CASC4-201ENST00000299957 AACSQ86V21 672 aa15.99■□□□□ 0.15
CASC4-201ENST00000299957 ABCC10Q5T3U5 1492 aa15.99■□□□□ 0.15
CASC4-201ENST00000299957 FLIIQ13045 1269 aa15.99■□□□□ 0.15
CASC4-201ENST00000299957 CSPP1Q1MSJ5 1256 aa15.99■□□□□ 0.15
CASC4-201ENST00000299957 ZNF530Q6P9A1 599 aaPredicted RBP15.99■□□□□ 0.15
CASC4-201ENST00000299957 CCAR2Q8N163 923 aaKnown RBP15.99■□□□□ 0.15
CASC4-201ENST00000299957 ANKRD36BQ8N2N9 1353 aa15.98■□□□□ 0.15
CASC4-201ENST00000299957 MPRIPQ6WCQ1 1025 aa15.98■□□□□ 0.15
CASC4-201ENST00000299957 BOLA2Q9H3K6 86 aa15.98■□□□□ 0.15
CASC4-201ENST00000299957 LARP1BQ659C4 914 aaKnown RBP15.98■□□□□ 0.15
CASC4-201ENST00000299957 CKAP2LQ8IYA6 745 aa15.98■□□□□ 0.15
CASC4-201ENST00000299957 MBD5Q9P267 1494 aa15.98■□□□□ 0.15
CASC4-201ENST00000299957 NRDCO43847 1150 aa15.97■□□□□ 0.15
CASC4-201ENST00000299957 APPP05067 770 aa15.97■□□□□ 0.15
CASC4-201ENST00000299957 HCLS1P14317 486 aaPredicted RBP15.97■□□□□ 0.15
CASC4-201ENST00000299957 CLCN1P35523 988 aa15.97■□□□□ 0.15
CASC4-201ENST00000299957 RAB3GAP1Q15042 981 aa15.97■□□□□ 0.15
CASC4-201ENST00000299957 NECAB1Q8N987 351 aa15.97■□□□□ 0.15
CASC4-201ENST00000299957 PKNOX2Q96KN3 472 aa15.97■□□□□ 0.15
CASC4-201ENST00000299957 KLHL40Q2TBA0 621 aa15.97■□□□□ 0.15
CASC4-201ENST00000299957 PIP4K2AP48426 406 aaPredicted RBP15.96■□□□□ 0.15
CASC4-201ENST00000299957 PDE1AP54750 535 aa15.96■□□□□ 0.15
CASC4-201ENST00000299957 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.96■□□□□ 0.15
CASC4-201ENST00000299957 ABCC11Q96J66 1382 aa15.96■□□□□ 0.15
CASC4-201ENST00000299957 ATP2B1P20020 1258 aa15.96■□□□□ 0.15
CASC4-201ENST00000299957 SASS6Q6UVJ0 657 aa15.96■□□□□ 0.15
CASC4-201ENST00000299957 ZC3H6P61129 1189 aaKnown RBP15.95■□□□□ 0.14
CASC4-201ENST00000299957 ITSN2Q9NZM3 1697 aa15.95■□□□□ 0.14
CASC4-201ENST00000299957 EIF4A2Q14240 407 aaKnown RBP15.95■□□□□ 0.14
CASC4-201ENST00000299957 GIMAP6Q6P9H5 292 aa15.95■□□□□ 0.14
CASC4-201ENST00000299957 ZNF692Q9BU19 519 aaPredicted RBP15.95■□□□□ 0.14
CASC4-201ENST00000299957 WDR33Q9C0J8 1336 aaKnown RBP15.95■□□□□ 0.14
CASC4-201ENST00000299957 WDR7Q9Y4E6 1490 aa15.95■□□□□ 0.14
CASC4-201ENST00000299957 NUP160Q12769 1436 aa15.95■□□□□ 0.14
CASC4-201ENST00000299957 PPP1R42Q7Z4L9 355 aa15.95■□□□□ 0.14
CASC4-201ENST00000299957 TTC5Q8N0Z6 440 aa15.95■□□□□ 0.14
CASC4-201ENST00000299957 UGGT1Q9NYU2 1555 aa15.95■□□□□ 0.14
CASC4-201ENST00000299957 TTC12Q9H892 705 aaPredicted RBP15.94■□□□□ 0.14
CASC4-201ENST00000299957 GUCY1B3Q02153 619 aa15.94■□□□□ 0.14
CASC4-201ENST00000299957 CEP85Q6P2H3 762 aa15.94■□□□□ 0.14
CASC4-201ENST00000299957 CYP46A1Q9Y6A2 500 aa15.94■□□□□ 0.14
CASC4-201ENST00000299957 PI4KAP2A4QPH2 592 aa15.94■□□□□ 0.14
CASC4-201ENST00000299957 WASHC4Q2M389 1173 aa15.94■□□□□ 0.14
CASC4-201ENST00000299957 ANKRD44Q8N8A2 993 aa15.94■□□□□ 0.14
CASC4-201ENST00000299957 PI4KAP1Q8N8J0 262 aa15.94■□□□□ 0.14
CASC4-201ENST00000299957 SDF4Q9BRK5 362 aa15.94■□□□□ 0.14
CASC4-201ENST00000299957 PTPRTO14522 1441 aa15.94■□□□□ 0.14
CASC4-201ENST00000299957 HTATSF1O43719 755 aaKnown RBP15.94■□□□□ 0.14
CASC4-201ENST00000299957 FILIP1Q7Z7B0 1213 aa15.94■□□□□ 0.14
CASC4-201ENST00000299957 ANTXR1Q9H6X2 564 aa15.94■□□□□ 0.14
CASC4-201ENST00000299957 ACEP12821 1306 aa15.93■□□□□ 0.14
CASC4-201ENST00000299957 DUOX2Q9NRD8 1548 aa15.93■□□□□ 0.14
CASC4-201ENST00000299957 C17orf53Q8N3J3 647 aaPredicted RBP15.93■□□□□ 0.14
CASC4-201ENST00000299957 RBSNQ9H1K0 784 aa15.93■□□□□ 0.14
CASC4-201ENST00000299957 PDRG1Q9NUG6 133 aa15.93■□□□□ 0.14
CASC4-201ENST00000299957 RNF20Q5VTR2 975 aa15.93■□□□□ 0.14
CASC4-201ENST00000299957 CHMP4CQ96CF2 233 aa15.93■□□□□ 0.14
CASC4-201ENST00000299957 TPM2P07951 284 aa15.93■□□□□ 0.14
CASC4-201ENST00000299957 GNAT3A8MTJ3 354 aa15.92■□□□□ 0.14
CASC4-201ENST00000299957 GSPT1P15170 499 aaKnown RBP15.92■□□□□ 0.14
CASC4-201ENST00000299957 DCTPP1Q9H773 170 aa15.92■□□□□ 0.14
CASC4-201ENST00000299957 CNPY2Q9Y2B0 182 aa15.92■□□□□ 0.14
CASC4-201ENST00000299957 MCM2P49736 904 aa15.92■□□□□ 0.14
CASC4-201ENST00000299957 ZMYND15Q9H091 742 aa15.92■□□□□ 0.14
CASC4-201ENST00000299957 CPLX1O14810 134 aa15.92■□□□□ 0.14
CASC4-201ENST00000299957 SYTL4Q96C24 671 aaPredicted RBP15.92■□□□□ 0.14
CASC4-201ENST00000299957 USP26Q9BXU7 913 aa15.92■□□□□ 0.14
CASC4-201ENST00000299957 ISY1Q9ULR0 285 aaKnown RBP15.92■□□□□ 0.14
CASC4-201ENST00000299957 PA2G4Q9UQ80 394 aaKnown RBP15.92■□□□□ 0.14
CASC4-201ENST00000299957 MTHFSDQ2M296 383 aaKnown RBP15.91■□□□□ 0.14
CASC4-201ENST00000299957 TSC1Q92574 1164 aa15.91■□□□□ 0.14
CASC4-201ENST00000299957 BTBD11A6QL63 1104 aa15.91■□□□□ 0.14
CASC4-201ENST00000299957 FAM173BQ6P4H8 233 aa15.91■□□□□ 0.14
CASC4-201ENST00000299957 SNX21Q969T3 373 aa15.91■□□□□ 0.14
CASC4-201ENST00000299957 LRRC2Q9BYS8 371 aa15.91■□□□□ 0.14
CASC4-201ENST00000299957 RAPGEF4Q8WZA2 1011 aa15.91■□□□□ 0.14
CASC4-201ENST00000299957 DDX58O95786 925 aaKnown RBP15.9■□□□□ 0.14
CASC4-201ENST00000299957 ZBTB9Q96C00 473 aa15.9■□□□□ 0.14
CASC4-201ENST00000299957 PHAXQ9H814 394 aaKnown RBP15.9■□□□□ 0.14
CASC4-201ENST00000299957 SHANK2Q9UPX8 1470 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms