RNA–Protein interactions for RNA: ENST00000299440.5

RAG1-201, Transcript of recombination activating 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAG1, Length 6,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAG1-201ENST00000299440 SETDB2Q96T68 719 aa8.53□□□□□ -1.04
RAG1-201ENST00000299440 SSBP05455 408 aaKnown RBP eCLIP8.53□□□□□ -1.04
RAG1-201ENST00000299440 IFIT5Q13325 482 aaKnown RBP8.53□□□□□ -1.04
RAG1-201ENST00000299440 CCDC96Q2M329 555 aa8.53□□□□□ -1.04
RAG1-201ENST00000299440 UBAC1Q9BSL1 405 aa8.53□□□□□ -1.04
RAG1-201ENST00000299440 MINDY4BA8MYZ0 360 aa8.53□□□□□ -1.04
RAG1-201ENST00000299440 A0A087WZG4 1122 aa8.53□□□□□ -1.04
RAG1-201ENST00000299440 PLCD3Q8N3E9 789 aa8.53□□□□□ -1.04
RAG1-201ENST00000299440 RTN4Q9NQC3 1192 aaKnown RBP8.53□□□□□ -1.04
RAG1-201ENST00000299440 CENPQQ7L2Z9 268 aaPredicted RBP8.52□□□□□ -1.04
RAG1-201ENST00000299440 ZCRB1Q8TBF4 217 aaKnown RBP8.52□□□□□ -1.04
RAG1-201ENST00000299440 THUMPD2Q9BTF0 503 aaKnown RBP8.52□□□□□ -1.04
RAG1-201ENST00000299440 BTG4Q9NY30 223 aa8.52□□□□□ -1.04
RAG1-201ENST00000299440 ASXL2Q76L83 1435 aa8.52□□□□□ -1.04
RAG1-201ENST00000299440 RRP1P56182 461 aaKnown RBP8.52□□□□□ -1.05
RAG1-201ENST00000299440 EMILIN1Q9Y6C2 1016 aa8.52□□□□□ -1.05
RAG1-201ENST00000299440 KIF21BO75037 1637 aa8.52□□□□□ -1.05
RAG1-201ENST00000299440 TRMT1LQ7Z2T5 733 aaKnown RBP8.52□□□□□ -1.05
RAG1-201ENST00000299440 NAIPQ13075 1403 aa8.52□□□□□ -1.05
RAG1-201ENST00000299440 APBA3O96018 575 aa8.52□□□□□ -1.05
RAG1-201ENST00000299440 PSMA5P28066 241 aa8.52□□□□□ -1.05
RAG1-201ENST00000299440 OGFOD1Q8N543 542 aa8.52□□□□□ -1.05
RAG1-201ENST00000299440 PDCL3Q9H2J4 239 aa8.52□□□□□ -1.05
RAG1-201ENST00000299440 USP21Q9UK80 565 aa8.52□□□□□ -1.05
RAG1-201ENST00000299440 NOB1Q9ULX3 412 aaKnown RBP8.52□□□□□ -1.05
RAG1-201ENST00000299440 CCT4P50991 539 aaKnown RBP8.52□□□□□ -1.05
RAG1-201ENST00000299440 FAM98CQ17RN3 349 aaKnown RBP8.52□□□□□ -1.05
RAG1-201ENST00000299440 PPP1R42Q7Z4L9 355 aa8.52□□□□□ -1.05
RAG1-201ENST00000299440 IQGAP2Q13576 1575 aa8.52□□□□□ -1.05
RAG1-201ENST00000299440 CCDC141Q6ZP82 1450 aa8.52□□□□□ -1.05
RAG1-201ENST00000299440 VEZTQ9HBM0 779 aa8.51□□□□□ -1.05
RAG1-201ENST00000299440 EHBP1L1Q8N3D4 1523 aa8.51□□□□□ -1.05
RAG1-201ENST00000299440 HDAC9Q9UKV0 1011 aa8.51□□□□□ -1.05
RAG1-201ENST00000299440 ANKRD18BA2A2Z9 1011 aa8.51□□□□□ -1.05
RAG1-201ENST00000299440 C19orf44Q9H6X5 657 aa8.51□□□□□ -1.05
RAG1-201ENST00000299440 RTCBQ9Y3I0 505 aaKnown RBP8.51□□□□□ -1.05
RAG1-201ENST00000299440 ACEP12821 1306 aa8.51□□□□□ -1.05
RAG1-201ENST00000299440 KIAA1107Q9UPP5 1409 aa8.51□□□□□ -1.05
RAG1-201ENST00000299440 TXLNAP40222 546 aa8.51□□□□□ -1.05
RAG1-201ENST00000299440 SLC5A1P13866 664 aa8.5□□□□□ -1.05
RAG1-201ENST00000299440 STK3Q13188 491 aa8.5□□□□□ -1.05
RAG1-201ENST00000299440 SMARCC1Q92922 1105 aaPredicted RBP8.5□□□□□ -1.05
RAG1-201ENST00000299440 IL1RAPL2Q9NP60 686 aa8.5□□□□□ -1.05
RAG1-201ENST00000299440 NSD3Q9BZ95 1437 aa8.5□□□□□ -1.05
RAG1-201ENST00000299440 ATP5J2-PTCD1G3V325 749 aa8.5□□□□□ -1.05
RAG1-201ENST00000299440 HIP1O00291 1037 aa8.5□□□□□ -1.05
RAG1-201ENST00000299440 BCAR3O75815 825 aa8.5□□□□□ -1.05
RAG1-201ENST00000299440 LARP1Q6PKG0 1096 aaKnown RBP8.5□□□□□ -1.05
RAG1-201ENST00000299440 SLF2Q8IX21 1173 aa8.5□□□□□ -1.05
RAG1-201ENST00000299440 TRIM22Q8IYM9 498 aa8.5□□□□□ -1.05
RAG1-201ENST00000299440 CDC5LQ99459 802 aaKnown RBP8.5□□□□□ -1.05
RAG1-201ENST00000299440 CCDC73Q6ZRK6 1079 aa8.5□□□□□ -1.05
RAG1-201ENST00000299440 TEX13AQ9BXU3 409 aaPredicted RBP8.5□□□□□ -1.05
RAG1-201ENST00000299440 ADGRF5Q8IZF2 1346 aa8.5□□□□□ -1.05
RAG1-201ENST00000299440 TAF7Q15545 349 aaPredicted RBP8.5□□□□□ -1.05
RAG1-201ENST00000299440 ARID3AQ99856 593 aa8.5□□□□□ -1.05
RAG1-201ENST00000299440 ZNF287Q9HBT7 754 aa8.5□□□□□ -1.05
RAG1-201ENST00000299440 ERICH3Q5RHP9 1530 aa8.5□□□□□ -1.05
RAG1-201ENST00000299440 DAPK1P53355 1430 aa8.49□□□□□ -1.05
RAG1-201ENST00000299440 CCDC7Q96M83 1385 aa8.49□□□□□ -1.05
RAG1-201ENST00000299440 UHRF1BP1Q6BDS2 1440 aa8.49□□□□□ -1.05
RAG1-201ENST00000299440 SYCP1Q15431 976 aa8.49□□□□□ -1.05
RAG1-201ENST00000299440 DUSP27Q5VZP5 1158 aa8.49□□□□□ -1.05
RAG1-201ENST00000299440 GNPATO15228 680 aa8.49□□□□□ -1.05
RAG1-201ENST00000299440 CABP5Q9NP86 173 aa8.49□□□□□ -1.05
RAG1-201ENST00000299440 HSP90AB2PQ58FF8 381 aa8.49□□□□□ -1.05
RAG1-201ENST00000299440 ZNF526Q8TF50 670 aaPredicted RBP8.49□□□□□ -1.05
RAG1-201ENST00000299440 RIMBP2O15034 1052 aa8.49□□□□□ -1.05
RAG1-201ENST00000299440 TNIP1Q15025 636 aa8.49□□□□□ -1.05
RAG1-201ENST00000299440 ATF7IPQ6VMQ6 1270 aa8.49□□□□□ -1.05
RAG1-201ENST00000299440 ZNF444Q8N0Y2 327 aaPredicted RBP8.49□□□□□ -1.05
RAG1-201ENST00000299440 JARID2Q92833 1246 aaPredicted RBP8.49□□□□□ -1.05
RAG1-201ENST00000299440 EFCAB5A4FU69 1503 aa8.48□□□□□ -1.05
RAG1-201ENST00000299440 EAPPQ56P03 285 aaPredicted RBP8.48□□□□□ -1.05
RAG1-201ENST00000299440 LRRCC1Q9C099 1032 aa8.48□□□□□ -1.05
RAG1-201ENST00000299440 AKAP2Q9Y2D5 859 aa8.48□□□□□ -1.05
RAG1-201ENST00000299440 LIG1P18858 919 aa8.48□□□□□ -1.05
RAG1-201ENST00000299440 CEBPZQ03701 1054 aaKnown RBP8.48□□□□□ -1.05
RAG1-201ENST00000299440 NIP7Q9Y221 180 aaKnown RBP eCLIP8.48□□□□□ -1.05
RAG1-201ENST00000299440 ARAP1Q96P48 1450 aa8.48□□□□□ -1.05
RAG1-201ENST00000299440 IL2RBP14784 551 aa8.48□□□□□ -1.05
RAG1-201ENST00000299440 SEC63Q9UGP8 760 aaKnown RBP8.48□□□□□ -1.05
RAG1-201ENST00000299440 DDX49Q9Y6V7 483 aaKnown RBP8.48□□□□□ -1.05
RAG1-201ENST00000299440 KIF14Q15058 1648 aa8.47□□□□□ -1.05
RAG1-201ENST00000299440 NFE2L2Q16236 605 aa8.47□□□□□ -1.05
RAG1-201ENST00000299440 PPP4R3AQ6IN85 833 aa8.47□□□□□ -1.05
RAG1-201ENST00000299440 TTC16Q8NEE8 873 aa8.47□□□□□ -1.05
RAG1-201ENST00000299440 CCNL1Q9UK58 526 aaPredicted RBP8.47□□□□□ -1.05
RAG1-201ENST00000299440 UHRF1BP1LA0JNW5 1464 aa8.47□□□□□ -1.05
RAG1-201ENST00000299440 RANBP6O60518 1105 aaKnown RBP8.47□□□□□ -1.05
RAG1-201ENST00000299440 FCHSD2O94868 740 aa8.47□□□□□ -1.05
RAG1-201ENST00000299440 GOLGA6L1Q8N7Z2 621 aa8.47□□□□□ -1.05
RAG1-201ENST00000299440 NLRP3Q96P20 1036 aa8.47□□□□□ -1.05
RAG1-201ENST00000299440 CDC45O75419 566 aa8.47□□□□□ -1.05
RAG1-201ENST00000299440 NOS1P29475 1434 aa8.47□□□□□ -1.05
RAG1-201ENST00000299440 HLA-DOAP06340 250 aa8.46□□□□□ -1.05
RAG1-201ENST00000299440 PIP4K2AP48426 406 aaPredicted RBP8.46□□□□□ -1.05
RAG1-201ENST00000299440 PLS1Q14651 629 aa8.46□□□□□ -1.05
RAG1-201ENST00000299440 SIRT1Q96EB6 747 aa8.46□□□□□ -1.05
RAG1-201ENST00000299440 NEBLO76041 1014 aa8.46□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms