RNA–Protein interactions for RNA: ENST00000299259.10

COPS2-201, Transcript of COP9 signalosome subunit 2, humanhuman

TSL 1 (best) BASIC

Gene COPS2, Length 2,036 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS2-201ENST00000299259 MCM10Q7L590 875 aa13.54□□□□□ -0.24
COPS2-201ENST00000299259 ANKRD24Q8TF21 1146 aa13.54□□□□□ -0.24
COPS2-201ENST00000299259 RTF1Q92541 710 aaKnown RBP13.54□□□□□ -0.24
COPS2-201ENST00000299259 FRAT1Q92837 279 aaPredicted RBP13.54□□□□□ -0.24
COPS2-201ENST00000299259 SMC4Q9NTJ3 1288 aa13.54□□□□□ -0.24
COPS2-201ENST00000299259 CPDO75976 1380 aa13.53□□□□□ -0.24
COPS2-201ENST00000299259 LRRC59Q96AG4 307 aaKnown RBP13.53□□□□□ -0.24
COPS2-201ENST00000299259 ERBB3P21860 1342 aa13.53□□□□□ -0.24
COPS2-201ENST00000299259 ZNF428Q96B54 188 aa13.52□□□□□ -0.24
COPS2-201ENST00000299259 HTATSF1O43719 755 aaKnown RBP13.52□□□□□ -0.25
COPS2-201ENST00000299259 CABLES1Q8TDN4 633 aa13.52□□□□□ -0.25
COPS2-201ENST00000299259 GNAT3A8MTJ3 354 aa13.51□□□□□ -0.25
COPS2-201ENST00000299259 SSH1Q8WYL5 1049 aa13.51□□□□□ -0.25
COPS2-201ENST00000299259 AXIN2Q9Y2T1 843 aa13.51□□□□□ -0.25
COPS2-201ENST00000299259 AHDC1Q5TGY3 1603 aaPredicted RBP13.51□□□□□ -0.25
COPS2-201ENST00000299259 KIF16BQ96L93 1317 aa13.51□□□□□ -0.25
COPS2-201ENST00000299259 KIAA0232Q92628 1395 aa13.51□□□□□ -0.25
COPS2-201ENST00000299259 ALDH1L2Q3SY69 923 aa13.51□□□□□ -0.25
COPS2-201ENST00000299259 KDM3BQ7LBC6 1761 aa13.5□□□□□ -0.25
COPS2-201ENST00000299259 ZKSCAN2Q63HK3 967 aa13.5□□□□□ -0.25
COPS2-201ENST00000299259 PKD1L3Q7Z443 1732 aa13.5□□□□□ -0.25
COPS2-201ENST00000299259 CHL1O00533 1208 aa13.49□□□□□ -0.25
COPS2-201ENST00000299259 PANK1Q8TE04 598 aa13.49□□□□□ -0.25
COPS2-201ENST00000299259 TWISTNBQ3B726 338 aaPredicted RBP13.49□□□□□ -0.25
COPS2-201ENST00000299259 PARP4Q9UKK3 1724 aaKnown RBP13.49□□□□□ -0.25
COPS2-201ENST00000299259 SIPA1L3O60292 1781 aaPredicted RBP13.48□□□□□ -0.25
COPS2-201ENST00000299259 ADAMTS7Q9UKP4 1686 aa13.48□□□□□ -0.25
COPS2-201ENST00000299259 MS4A1P11836 297 aa13.48□□□□□ -0.25
COPS2-201ENST00000299259 TSPYL6Q8N831 410 aa13.48□□□□□ -0.25
COPS2-201ENST00000299259 COL22A1Q8NFW1 1626 aaPredicted RBP13.48□□□□□ -0.25
COPS2-201ENST00000299259 VAMP4O75379 141 aa13.47□□□□□ -0.25
COPS2-201ENST00000299259 COG6Q9Y2V7 657 aa13.47□□□□□ -0.25
COPS2-201ENST00000299259 SCN11AQ9UI33 1791 aa13.47□□□□□ -0.25
COPS2-201ENST00000299259 CACNA1FO60840 1977 aa13.47□□□□□ -0.25
COPS2-201ENST00000299259 CHRNA2Q15822 529 aa13.47□□□□□ -0.25
COPS2-201ENST00000299259 FTSJ3Q8IY81 847 aaKnown RBP13.47□□□□□ -0.25
COPS2-201ENST00000299259 C8orf58Q8NAV2 365 aa13.47□□□□□ -0.25
COPS2-201ENST00000299259 TNNQ9UQP3 1299 aa13.47□□□□□ -0.25
COPS2-201ENST00000299259 OVOS2A0A0G2JMS6 1433 aa13.46□□□□□ -0.25
COPS2-201ENST00000299259 RLBP1P12271 317 aa13.46□□□□□ -0.25
COPS2-201ENST00000299259 HAP1P54257 671 aaPredicted RBP13.46□□□□□ -0.25
COPS2-201ENST00000299259 BRPF1P55201 1214 aaPredicted RBP13.46□□□□□ -0.25
COPS2-201ENST00000299259 AMOTQ4VCS5 1084 aa13.46□□□□□ -0.25
COPS2-201ENST00000299259 PLEKHO1Q53GL0 409 aaPredicted RBP13.46□□□□□ -0.25
COPS2-201ENST00000299259 TSPYL4Q9UJ04 414 aa13.46□□□□□ -0.25
COPS2-201ENST00000299259 PHLPP1O60346 1717 aa13.46□□□□□ -0.25
COPS2-201ENST00000299259 CEMIPQ8WUJ3 1361 aa13.46□□□□□ -0.26
COPS2-201ENST00000299259 PLEKHG2Q9H7P9 1386 aa13.46□□□□□ -0.26
COPS2-201ENST00000299259 ELL2O00472 640 aaPredicted RBP13.46□□□□□ -0.26
COPS2-201ENST00000299259 TRIM27P14373 513 aa13.46□□□□□ -0.26
COPS2-201ENST00000299259 ZNF530Q6P9A1 599 aaPredicted RBP13.46□□□□□ -0.26
COPS2-201ENST00000299259 ATF7IPQ6VMQ6 1270 aa13.46□□□□□ -0.26
COPS2-201ENST00000299259 DZIP1LQ8IYY4 767 aaKnown RBP13.46□□□□□ -0.26
COPS2-201ENST00000299259 CLUAP1Q96AJ1 413 aa13.46□□□□□ -0.26
COPS2-201ENST00000299259 MEGF6O75095 1541 aa13.45□□□□□ -0.26
COPS2-201ENST00000299259 IPO8O15397 1037 aaKnown RBP13.45□□□□□ -0.26
COPS2-201ENST00000299259 CSB-PGBD3P0DP91 1061 aa13.45□□□□□ -0.26
COPS2-201ENST00000299259 PRDM11Q9NQV5 511 aa13.45□□□□□ -0.26
COPS2-201ENST00000299259 NLRP2Q9NX02 1062 aa13.45□□□□□ -0.26
COPS2-201ENST00000299259 NOB1Q9ULX3 412 aaKnown RBP13.45□□□□□ -0.26
COPS2-201ENST00000299259 COL5A2P05997 1499 aaPredicted RBP13.44□□□□□ -0.26
COPS2-201ENST00000299259 AAMPQ13685 434 aa13.44□□□□□ -0.26
COPS2-201ENST00000299259 MVPQ14764 893 aaKnown RBP13.44□□□□□ -0.26
COPS2-201ENST00000299259 AKAP4Q5JQC9 854 aa13.44□□□□□ -0.26
COPS2-201ENST00000299259 IL17REQ8NFR9 667 aa13.44□□□□□ -0.26
COPS2-201ENST00000299259 COL16A1Q07092 1604 aaPredicted RBP13.43□□□□□ -0.26
COPS2-201ENST00000299259 KRT24Q2M2I5 525 aa13.43□□□□□ -0.26
COPS2-201ENST00000299259 C1orf141Q5JVX7 400 aa13.43□□□□□ -0.26
COPS2-201ENST00000299259 MRPL50Q8N5N7 158 aaKnown RBP13.43□□□□□ -0.26
COPS2-201ENST00000299259 RAPGEF4Q8WZA2 1011 aa13.43□□□□□ -0.26
COPS2-201ENST00000299259 COL14A1Q05707 1796 aaKnown RBP13.43□□□□□ -0.26
COPS2-201ENST00000299259 KDM2BQ8NHM5 1336 aa13.43□□□□□ -0.26
COPS2-201ENST00000299259 BABAM1Q9NWV8 329 aa13.42□□□□□ -0.26
COPS2-201ENST00000299259 MIS18AQ9NYP9 233 aa13.42□□□□□ -0.26
COPS2-201ENST00000299259 TAF7Q15545 349 aaPredicted RBP13.41□□□□□ -0.26
COPS2-201ENST00000299259 CENPQQ7L2Z9 268 aaPredicted RBP13.41□□□□□ -0.26
COPS2-201ENST00000299259 TSHZ2Q9NRE2 1034 aa13.41□□□□□ -0.26
COPS2-201ENST00000299259 N4BP2Q86UW6 1770 aaPredicted RBP13.41□□□□□ -0.26
COPS2-201ENST00000299259 WDR17Q8IZU2 1322 aa13.41□□□□□ -0.26
COPS2-201ENST00000299259 ARHGAP45Q92619 1136 aa13.4□□□□□ -0.26
COPS2-201ENST00000299259 SHANK3Q9BYB0 1731 aa13.4□□□□□ -0.26
COPS2-201ENST00000299259 TCERG1O14776 1098 aaKnown RBP13.4□□□□□ -0.26
COPS2-201ENST00000299259 TATP17735 454 aaPredicted RBP13.4□□□□□ -0.26
COPS2-201ENST00000299259 ITPRIPQ8IWB1 547 aa13.4□□□□□ -0.26
COPS2-201ENST00000299259 DDX19BQ9UMR2 479 aa13.4□□□□□ -0.26
COPS2-201ENST00000299259 PLCH1Q4KWH8 1693 aa13.39□□□□□ -0.27
COPS2-201ENST00000299259 WNK3Q9BYP7 1800 aa13.39□□□□□ -0.27
COPS2-201ENST00000299259 SOS1Q07889 1333 aaPredicted RBP13.39□□□□□ -0.27
COPS2-201ENST00000299259 TEFQ10587 303 aa13.39□□□□□ -0.27
COPS2-201ENST00000299259 MPRIPQ6WCQ1 1025 aa13.39□□□□□ -0.27
COPS2-201ENST00000299259 TMEM57Q8N5G2 664 aa13.39□□□□□ -0.27
COPS2-201ENST00000299259 ABCC4O15439 1325 aa13.38□□□□□ -0.27
COPS2-201ENST00000299259 RNMTO43148 476 aaKnown RBP13.38□□□□□ -0.27
COPS2-201ENST00000299259 API5Q9BZZ5 524 aaKnown RBP13.38□□□□□ -0.27
COPS2-201ENST00000299259 LGR6Q9HBX8 967 aa13.38□□□□□ -0.27
COPS2-201ENST00000299259 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.38□□□□□ -0.273e-7■■■□□ 15.5
COPS2-201ENST00000299259 SPG7Q9UQ90 795 aa13.38□□□□□ -0.27
COPS2-201ENST00000299259 MRC1P22897 1456 aa13.38□□□□□ -0.27
COPS2-201ENST00000299259 RGS12O14924 1447 aa13.37□□□□□ -0.27
COPS2-201ENST00000299259 KDM6AO15550 1401 aaPredicted RBP13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms