RNA–Protein interactions for RNA: ENST00000297933.10

GAPVD1-202, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GAPVD1, Length 6,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-202ENST00000297933 STK38Q15208 465 aa8.22□□□□□ -1.09
GAPVD1-202ENST00000297933 LARP1Q6PKG0 1096 aaKnown RBP8.22□□□□□ -1.09
GAPVD1-202ENST00000297933 SCLT1Q96NL6 688 aa8.22□□□□□ -1.09
GAPVD1-202ENST00000297933 ANKRD1Q15327 319 aa8.22□□□□□ -1.09
GAPVD1-202ENST00000297933 NFE2L2Q16236 605 aa8.22□□□□□ -1.09
GAPVD1-202ENST00000297933 FILIP1LQ4L180 1135 aa8.22□□□□□ -1.09
GAPVD1-202ENST00000297933 WDR63Q8IWG1 891 aa8.22□□□□□ -1.09
GAPVD1-202ENST00000297933 C8orf37Q96NL8 207 aa8.22□□□□□ -1.09
GAPVD1-202ENST00000297933 CYP46A1Q9Y6A2 500 aa8.22□□□□□ -1.09
GAPVD1-202ENST00000297933 PDCP20941 246 aa8.21□□□□□ -1.09
GAPVD1-202ENST00000297933 A0A087WZG4 1122 aa8.21□□□□□ -1.1
GAPVD1-202ENST00000297933 TRIM21P19474 475 aaKnown RBP8.21□□□□□ -1.1
GAPVD1-202ENST00000297933 PIP4K2AP48426 406 aaPredicted RBP8.21□□□□□ -1.1
GAPVD1-202ENST00000297933 STK3Q13188 491 aa8.21□□□□□ -1.1
GAPVD1-202ENST00000297933 JMYQ8N9B5 988 aa8.21□□□□□ -1.1
GAPVD1-202ENST00000297933 TMEM87AQ8NBN3 555 aa8.21□□□□□ -1.1
GAPVD1-202ENST00000297933 TEX13AQ9BXU3 409 aaPredicted RBP8.21□□□□□ -1.1
GAPVD1-202ENST00000297933 MKNK2Q9HBH9 465 aa8.21□□□□□ -1.1
GAPVD1-202ENST00000297933 MIS18AQ9NYP9 233 aa8.21□□□□□ -1.1
GAPVD1-202ENST00000297933 GRIN2AQ12879 1464 aa8.21□□□□□ -1.1
GAPVD1-202ENST00000297933 SPDYE4A6NLX3 237 aa8.2□□□□□ -1.1
GAPVD1-202ENST00000297933 WASLO00401 505 aaPredicted RBP8.2□□□□□ -1.1
GAPVD1-202ENST00000297933 CDKL5O76039 1030 aa8.2□□□□□ -1.1
GAPVD1-202ENST00000297933 CT47B1P0C2W7 299 aaPredicted RBP8.2□□□□□ -1.1
GAPVD1-202ENST00000297933 SLC5A1P13866 664 aa8.2□□□□□ -1.1
GAPVD1-202ENST00000297933 TEX14Q8IWB6 1497 aa8.2□□□□□ -1.1
GAPVD1-202ENST00000297933 KINO60870 393 aaKnown RBP8.2□□□□□ -1.1
GAPVD1-202ENST00000297933 TAF7Q15545 349 aaPredicted RBP8.2□□□□□ -1.1
GAPVD1-202ENST00000297933 PIBF1Q8WXW3 757 aa8.2□□□□□ -1.1
GAPVD1-202ENST00000297933 BMP2KQ9NSY1 1161 aaPredicted RBP8.2□□□□□ -1.1
GAPVD1-202ENST00000297933 NEK4P51957 841 aa8.2□□□□□ -1.1
GAPVD1-202ENST00000297933 IFIT5Q13325 482 aaKnown RBP8.2□□□□□ -1.1
GAPVD1-202ENST00000297933 FMNL2Q96PY5 1086 aa8.2□□□□□ -1.1
GAPVD1-202ENST00000297933 SEC63Q9UGP8 760 aaKnown RBP8.2□□□□□ -1.1
GAPVD1-202ENST00000297933 FAM135AQ9P2D6 1515 aa8.2□□□□□ -1.1
GAPVD1-202ENST00000297933 TNRQ92752 1358 aa8.2□□□□□ -1.1
GAPVD1-202ENST00000297933 BCAR3O75815 825 aa8.2□□□□□ -1.1
GAPVD1-202ENST00000297933 SSBP05455 408 aaKnown RBP eCLIP8.2□□□□□ -1.1
GAPVD1-202ENST00000297933 STIM1Q13586 685 aa8.2□□□□□ -1.1
GAPVD1-202ENST00000297933 RUFY1Q96T51 708 aa8.2□□□□□ -1.1
GAPVD1-202ENST00000297933 ANKRD18BA2A2Z9 1011 aa8.2□□□□□ -1.1
GAPVD1-202ENST00000297933 MCM2P49736 904 aa8.2□□□□□ -1.1
GAPVD1-202ENST00000297933 CDR1P51861 262 aa8.2□□□□□ -1.1
GAPVD1-202ENST00000297933 NBPF8Q3BBV2 869 aa8.2□□□□□ -1.1
GAPVD1-202ENST00000297933 NBPF14Q5TI25 921 aa8.2□□□□□ -1.1
GAPVD1-202ENST00000297933 DDX46Q7L014 1031 aaKnown RBP8.2□□□□□ -1.1
GAPVD1-202ENST00000297933 MCM10Q7L590 875 aa8.2□□□□□ -1.1
GAPVD1-202ENST00000297933 CEBPZQ03701 1054 aaKnown RBP8.19□□□□□ -1.1
GAPVD1-202ENST00000297933 PPP4R3AQ6IN85 833 aa8.19□□□□□ -1.1
GAPVD1-202ENST00000297933 NME9Q86XW9 330 aa8.19□□□□□ -1.1
GAPVD1-202ENST00000297933 CLEC11AQ9Y240 323 aa8.19□□□□□ -1.1
GAPVD1-202ENST00000297933 POLD1P28340 1107 aa8.19□□□□□ -1.1
GAPVD1-202ENST00000297933 DUSP27Q5VZP5 1158 aa8.19□□□□□ -1.1
GAPVD1-202ENST00000297933 SMARCE1Q969G3 411 aa8.19□□□□□ -1.1
GAPVD1-202ENST00000297933 DNAI2Q9GZS0 605 aa8.19□□□□□ -1.1
GAPVD1-202ENST00000297933 IMMTQ16891 758 aaKnown RBP8.19□□□□□ -1.1
GAPVD1-202ENST00000297933 CAGE1Q8TC20 777 aa8.19□□□□□ -1.1
GAPVD1-202ENST00000297933 MYO6Q9UM54 1294 aa8.19□□□□□ -1.1
GAPVD1-202ENST00000297933 FANCAO15360 1455 aa8.19□□□□□ -1.1
GAPVD1-202ENST00000297933 PLB1Q6P1J6 1458 aa8.19□□□□□ -1.1
GAPVD1-202ENST00000297933 MYO1BO43795 1136 aa8.19□□□□□ -1.1
GAPVD1-202ENST00000297933 TNNT3P45378 269 aaPredicted RBP8.19□□□□□ -1.1
GAPVD1-202ENST00000297933 BRPF1P55201 1214 aaPredicted RBP8.19□□□□□ -1.1
GAPVD1-202ENST00000297933 IFNL2Q8IZJ0 200 aa8.19□□□□□ -1.1
GAPVD1-202ENST00000297933 TANGO6Q9C0B7 1094 aa8.19□□□□□ -1.1
GAPVD1-202ENST00000297933 PATL2C9JE40 543 aaKnown RBP8.19□□□□□ -1.1
GAPVD1-202ENST00000297933 DESP17661 470 aa8.19□□□□□ -1.1
GAPVD1-202ENST00000297933 PPP1R42Q7Z4L9 355 aa8.19□□□□□ -1.1
GAPVD1-202ENST00000297933 CAMSAP2Q08AD1 1489 aa8.18□□□□□ -1.1
GAPVD1-202ENST00000297933 GRM1Q13255 1194 aa8.18□□□□□ -1.1
GAPVD1-202ENST00000297933 CUL7Q14999 1698 aa8.18□□□□□ -1.1
GAPVD1-202ENST00000297933 MINDY4BA8MYZ0 360 aa8.18□□□□□ -1.1
GAPVD1-202ENST00000297933 GPTP24298 496 aa8.18□□□□□ -1.1
GAPVD1-202ENST00000297933 CCDC96Q2M329 555 aa8.18□□□□□ -1.1
GAPVD1-202ENST00000297933 ZNF444Q8N0Y2 327 aaPredicted RBP8.18□□□□□ -1.1
GAPVD1-202ENST00000297933 WASF1Q92558 559 aa8.18□□□□□ -1.1
GAPVD1-202ENST00000297933 CDCA7LQ96GN5 454 aa8.18□□□□□ -1.1
GAPVD1-202ENST00000297933 FAM13BQ9NYF5 915 aa8.18□□□□□ -1.1
GAPVD1-202ENST00000297933 PDZRN3Q9UPQ7 1066 aa8.18□□□□□ -1.1
GAPVD1-202ENST00000297933 NEBLO76041 1014 aa8.18□□□□□ -1.1
GAPVD1-202ENST00000297933 CHRNA2Q15822 529 aa8.18□□□□□ -1.1
GAPVD1-202ENST00000297933 CUL5Q93034 780 aa8.18□□□□□ -1.1
GAPVD1-202ENST00000297933 ABCA10Q8WWZ4 1543 aa8.18□□□□□ -1.1
GAPVD1-202ENST00000297933 SETQ01105 290 aaPredicted RBP8.18□□□□□ -1.1
GAPVD1-202ENST00000297933 ATF7IPQ6VMQ6 1270 aa8.18□□□□□ -1.1
GAPVD1-202ENST00000297933 MAP3K12Q12852 859 aa8.17□□□□□ -1.1
GAPVD1-202ENST00000297933 IDI1Q13907 227 aa8.17□□□□□ -1.1
GAPVD1-202ENST00000297933 TTLL5Q6EMB2 1281 aa8.17□□□□□ -1.1
GAPVD1-202ENST00000297933 CDC5LQ99459 802 aaKnown RBP8.17□□□□□ -1.1
GAPVD1-202ENST00000297933 ANKRD24Q8TF21 1146 aa8.17□□□□□ -1.1
GAPVD1-202ENST00000297933 ACSBG1Q96GR2 724 aa8.17□□□□□ -1.1
GAPVD1-202ENST00000297933 FEZ1Q99689 392 aa8.17□□□□□ -1.1
GAPVD1-202ENST00000297933 EHMT1Q9H9B1 1298 aa8.17□□□□□ -1.1
GAPVD1-202ENST00000297933 IL1RAPL2Q9NP60 686 aa8.17□□□□□ -1.1
GAPVD1-202ENST00000297933 LETM1O95202 739 aaPredicted RBP8.17□□□□□ -1.1
GAPVD1-202ENST00000297933 SMC2O95347 1197 aa8.17□□□□□ -1.1
GAPVD1-202ENST00000297933 PDE3AQ14432 1141 aa8.17□□□□□ -1.1
GAPVD1-202ENST00000297933 CWC27Q6UX04 472 aaKnown RBP8.17□□□□□ -1.1
GAPVD1-202ENST00000297933 HYPKQ9NX55 129 aa8.17□□□□□ -1.1
GAPVD1-202ENST00000297933 TIAM1Q13009 1591 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 154.3 ms