RNA–Protein interactions for RNA: ENST00000297615.9

TTC39B-201, Transcript of tetratricopeptide repeat domain 39B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TTC39B, Length 3,053 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39B-201ENST00000297615 PRAMEF22A3QJZ6 481 aa16.85■□□□□ 0.29
TTC39B-201ENST00000297615 CD2BP2O95400 341 aaKnown RBP16.85■□□□□ 0.29
TTC39B-201ENST00000297615 HDAC1Q13547 482 aaPredicted RBP16.85■□□□□ 0.29
TTC39B-201ENST00000297615 FOXD4L6Q3SYB3 417 aaPredicted RBP16.85■□□□□ 0.29
TTC39B-201ENST00000297615 FOXD4L3Q6VB84 417 aaPredicted RBP16.85■□□□□ 0.29
TTC39B-201ENST00000297615 IL17REQ8NFR9 667 aa16.85■□□□□ 0.29
TTC39B-201ENST00000297615 IL16Q14005 1332 aa16.85■□□□□ 0.29
TTC39B-201ENST00000297615 HSP90AB1P08238 724 aaKnown RBP16.85■□□□□ 0.29
TTC39B-201ENST00000297615 PLEKHG3A1L390 1219 aa16.84■□□□□ 0.29
TTC39B-201ENST00000297615 HOXC9P31274 260 aa16.84■□□□□ 0.29
TTC39B-201ENST00000297615 CCDC9Q9Y3X0 531 aaKnown RBP16.84■□□□□ 0.29
TTC39B-201ENST00000297615 CT47B1P0C2W7 299 aaPredicted RBP16.84■□□□□ 0.29
TTC39B-201ENST00000297615 CHRNA2Q15822 529 aa16.84■□□□□ 0.29
TTC39B-201ENST00000297615 EIF5BO60841 1220 aaKnown RBP16.83■□□□□ 0.29
TTC39B-201ENST00000297615 STK31Q9BXU1 1019 aa16.83■□□□□ 0.29
TTC39B-201ENST00000297615 API5Q9BZZ5 524 aaKnown RBP16.83■□□□□ 0.29
TTC39B-201ENST00000297615 CHL1O00533 1208 aa16.83■□□□□ 0.28
TTC39B-201ENST00000297615 AAMPQ13685 434 aa16.83■□□□□ 0.28
TTC39B-201ENST00000297615 TBC1D9Q6ZT07 1266 aa16.83■□□□□ 0.28
TTC39B-201ENST00000297615 ANKLE2Q86XL3 938 aa16.83■□□□□ 0.28
TTC39B-201ENST00000297615 ATP7BP35670 1465 aa16.82■□□□□ 0.28
TTC39B-201ENST00000297615 PROSER2Q86WR7 435 aaPredicted RBP16.82■□□□□ 0.28
TTC39B-201ENST00000297615 RILPL2Q969X0 211 aa16.82■□□□□ 0.28
TTC39B-201ENST00000297615 CHAMP1Q96JM3 812 aa16.82■□□□□ 0.28
TTC39B-201ENST00000297615 TBX22Q9Y458 520 aa16.82■□□□□ 0.28
TTC39B-201ENST00000297615 SLC39A6Q13433 755 aa16.81■□□□□ 0.28
TTC39B-201ENST00000297615 ANTXR1Q9H6X2 564 aa16.81■□□□□ 0.28
TTC39B-201ENST00000297615 USP6P35125 1406 aa16.81■□□□□ 0.28
TTC39B-201ENST00000297615 MSH6P52701 1360 aa16.81■□□□□ 0.28
TTC39B-201ENST00000297615 LARP6Q9BRS8 491 aaKnown RBP16.81■□□□□ 0.28
TTC39B-201ENST00000297615 TRIM6-TRIM34B2RNG4 842 aa16.8■□□□□ 0.28
TTC39B-201ENST00000297615 GNAT3A8MTJ3 354 aa16.8■□□□□ 0.28
TTC39B-201ENST00000297615 GSPT1P15170 499 aaKnown RBP16.8■□□□□ 0.28
TTC39B-201ENST00000297615 HDGFL1Q5TGJ6 251 aa16.8■□□□□ 0.28
TTC39B-201ENST00000297615 PNMA6EA0A0J9YXQ4 647 aa16.79■□□□□ 0.28
TTC39B-201ENST00000297615 A0A0G2JS52 829 aa16.78■□□□□ 0.28
TTC39B-201ENST00000297615 CSB-PGBD3P0DP91 1061 aa16.78■□□□□ 0.28
TTC39B-201ENST00000297615 NUTM1Q86Y26 1132 aa16.78■□□□□ 0.28
TTC39B-201ENST00000297615 ZNF530Q6P9A1 599 aaPredicted RBP16.78■□□□□ 0.28
TTC39B-201ENST00000297615 NLRP2Q9NX02 1062 aa16.78■□□□□ 0.28
TTC39B-201ENST00000297615 FLIIQ13045 1269 aa16.78■□□□□ 0.28
TTC39B-201ENST00000297615 SPATA31D1Q6ZQQ2 1576 aa16.78■□□□□ 0.28
TTC39B-201ENST00000297615 LRRFIP2Q9Y608 721 aaKnown RBP16.78■□□□□ 0.28
TTC39B-201ENST00000297615 CEP85Q6P2H3 762 aa16.77■□□□□ 0.28
TTC39B-201ENST00000297615 DDX54Q8TDD1 881 aaKnown RBP16.77■□□□□ 0.28
TTC39B-201ENST00000297615 AXIN2Q9Y2T1 843 aa16.77■□□□□ 0.28
TTC39B-201ENST00000297615 DLC1Q96QB1 1528 aa16.77■□□□□ 0.27
TTC39B-201ENST00000297615 PLEKHM2Q8IWE5 1019 aa16.77■□□□□ 0.27
TTC39B-201ENST00000297615 MCM4P33991 863 aa16.76■□□□□ 0.27
TTC39B-201ENST00000297615 TEFQ10587 303 aa16.76■□□□□ 0.27
TTC39B-201ENST00000297615 PANK2Q9BZ23 570 aa16.76■□□□□ 0.27
TTC39B-201ENST00000297615 ZNF330Q9Y3S2 320 aaPredicted RBP16.76■□□□□ 0.27
TTC39B-201ENST00000297615 PLEKHG1Q9ULL1 1385 aa16.75■□□□□ 0.27
TTC39B-201ENST00000297615 MYL6BP14649 208 aa16.75■□□□□ 0.27
TTC39B-201ENST00000297615 CHMP5Q9NZZ3 219 aa16.75■□□□□ 0.27
TTC39B-201ENST00000297615 CHPF2Q9P2E5 772 aa16.75■□□□□ 0.27
TTC39B-201ENST00000297615 ADGRB2O60241 1585 aa16.75■□□□□ 0.27
TTC39B-201ENST00000297615 MED14O60244 1454 aa16.75■□□□□ 0.27
TTC39B-201ENST00000297615 ABCC4O15439 1325 aa16.74■□□□□ 0.27
TTC39B-201ENST00000297615 NRXN3Q9Y4C0 1643 aa16.73■□□□□ 0.27
TTC39B-201ENST00000297615 TRAK2O60296 914 aa16.73■□□□□ 0.27
TTC39B-201ENST00000297615 TAF7Q15545 349 aaPredicted RBP16.73■□□□□ 0.27
TTC39B-201ENST00000297615 GAS2L2Q8NHY3 880 aa16.73■□□□□ 0.27
TTC39B-201ENST00000297615 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.73■□□□□ 0.27
TTC39B-201ENST00000297615 USP32Q8NFA0 1604 aa16.73■□□□□ 0.27
TTC39B-201ENST00000297615 SDSP20132 328 aa16.73■□□□□ 0.27
TTC39B-201ENST00000297615 FLT4P35916 1363 aa16.73■□□□□ 0.27
TTC39B-201ENST00000297615 PI4KAP2A4QPH2 592 aa16.73■□□□□ 0.27
TTC39B-201ENST00000297615 GCP02774 474 aa16.73■□□□□ 0.27
TTC39B-201ENST00000297615 PROSER3Q2NL68 480 aa16.73■□□□□ 0.27
TTC39B-201ENST00000297615 PI4KAP1Q8N8J0 262 aa16.73■□□□□ 0.27
TTC39B-201ENST00000297615 RIMS1Q86UR5 1692 aaKnown RBP16.72■□□□□ 0.27
TTC39B-201ENST00000297615 NCLP19338 710 aaKnown RBP16.72■□□□□ 0.27
TTC39B-201ENST00000297615 OS9Q13438 667 aaPredicted RBP16.72■□□□□ 0.27
TTC39B-201ENST00000297615 GCC1Q96CN9 775 aa16.72■□□□□ 0.27
TTC39B-201ENST00000297615 AATKQ6ZMQ8 1374 aa16.72■□□□□ 0.27
TTC39B-201ENST00000297615 AGLP35573 1532 aa16.72■□□□□ 0.27
TTC39B-201ENST00000297615 SURF6O75683 361 aaKnown RBP16.71■□□□□ 0.27
TTC39B-201ENST00000297615 NBPF7P0C2Y1 421 aaPredicted RBP16.71■□□□□ 0.27
TTC39B-201ENST00000297615 BTBD11A6QL63 1104 aa16.71■□□□□ 0.27
TTC39B-201ENST00000297615 GOLGA6L3A6NEY3 463 aa16.71■□□□□ 0.26
TTC39B-201ENST00000297615 CWF19L2Q2TBE0 894 aaKnown RBP16.71■□□□□ 0.26
TTC39B-201ENST00000297615 SIL1Q9H173 461 aa16.71■□□□□ 0.26
TTC39B-201ENST00000297615 KIF13AQ9H1H9 1805 aa16.71■□□□□ 0.26
TTC39B-201ENST00000297615 DCTPP1Q9H773 170 aa16.7■□□□□ 0.26
TTC39B-201ENST00000297615 BMP2KLQ5H9B9 411 aa16.7■□□□□ 0.26
TTC39B-201ENST00000297615 KRT28Q7Z3Y7 464 aa16.7■□□□□ 0.26
TTC39B-201ENST00000297615 ANKRD44Q8N8A2 993 aa16.7■□□□□ 0.26
TTC39B-201ENST00000297615 ARHGAP45Q92619 1136 aa16.7■□□□□ 0.26
TTC39B-201ENST00000297615 PA2G4Q9UQ80 394 aaKnown RBP16.7■□□□□ 0.26
TTC39B-201ENST00000297615 CEP170BQ9Y4F5 1589 aaPredicted RBP16.7■□□□□ 0.26
TTC39B-201ENST00000297615 CDK12Q9NYV4 1490 aaPredicted RBP16.69■□□□□ 0.26
TTC39B-201ENST00000297615 GOLGB1Q14789 3259 aaKnown RBP16.69■□□□□ 0.26
TTC39B-201ENST00000297615 CCDC30Q5VVM6 783 aa16.69■□□□□ 0.26
TTC39B-201ENST00000297615 UNC5CLQ8IV45 518 aa16.69■□□□□ 0.26
TTC39B-201ENST00000297615 ANKRD24Q8TF21 1146 aa16.69■□□□□ 0.26
TTC39B-201ENST00000297615 KLHDC4Q8TBB5 520 aa16.68■□□□□ 0.26
TTC39B-201ENST00000297615 TNPO1Q92973 898 aaKnown RBP16.68■□□□□ 0.26
TTC39B-201ENST00000297615 HAP1P54257 671 aaPredicted RBP16.68■□□□□ 0.26
TTC39B-201ENST00000297615 INTS3Q68E01 1043 aaKnown RBP16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms