RNA–Protein interactions for RNA: ENST00000297265.4

CHMP4C-201, Transcript of charged multivesicular body protein 4C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4C, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4C-201ENST00000297265 MRPL50Q8N5N7 158 aaKnown RBP17.44■□□□□ 0.38
CHMP4C-201ENST00000297265 NBPF4Q96M43 638 aa17.44■□□□□ 0.38
CHMP4C-201ENST00000297265 RGPD2P0DJD1 1756 aa17.43■□□□□ 0.38
CHMP4C-201ENST00000297265 KIF16BQ96L93 1317 aa17.42■□□□□ 0.38
CHMP4C-201ENST00000297265 MED1Q15648 1581 aaPredicted RBP17.42■□□□□ 0.38
CHMP4C-201ENST00000297265 KRT24Q2M2I5 525 aa17.41■□□□□ 0.38
CHMP4C-201ENST00000297265 CADPS2Q86UW7 1296 aa17.41■□□□□ 0.38
CHMP4C-201ENST00000297265 USHBP1Q8N6Y0 703 aa17.41■□□□□ 0.38
CHMP4C-201ENST00000297265 GAS2L2Q8NHY3 880 aa17.41■□□□□ 0.38
CHMP4C-201ENST00000297265 MSH6P52701 1360 aa17.41■□□□□ 0.38
CHMP4C-201ENST00000297265 AXIN2Q9Y2T1 843 aa17.41■□□□□ 0.38
CHMP4C-201ENST00000297265 MS4A1P11836 297 aa17.4■□□□□ 0.38
CHMP4C-201ENST00000297265 HTATSF1O43719 755 aaKnown RBP17.39■□□□□ 0.38
CHMP4C-201ENST00000297265 LMOD2Q6P5Q4 547 aa17.39■□□□□ 0.38
CHMP4C-201ENST00000297265 FTSJ3Q8IY81 847 aaKnown RBP17.39■□□□□ 0.38
CHMP4C-201ENST00000297265 TMEM57Q8N5G2 664 aa17.39■□□□□ 0.38
CHMP4C-201ENST00000297265 LRRC37A3O60309 1634 aa17.39■□□□□ 0.37
CHMP4C-201ENST00000297265 NCAPD2Q15021 1401 aa17.39■□□□□ 0.37
CHMP4C-201ENST00000297265 IPO8O15397 1037 aaKnown RBP17.39■□□□□ 0.37
CHMP4C-201ENST00000297265 ARHGAP45Q92619 1136 aa17.39■□□□□ 0.37
CHMP4C-201ENST00000297265 MIS18AQ9NYP9 233 aa17.39■□□□□ 0.37
CHMP4C-201ENST00000297265 KIAA0232Q92628 1395 aa17.38■□□□□ 0.37
CHMP4C-201ENST00000297265 IL17REQ8NFR9 667 aa17.38■□□□□ 0.37
CHMP4C-201ENST00000297265 LRRC59Q96AG4 307 aaKnown RBP17.38■□□□□ 0.37
CHMP4C-201ENST00000297265 ZNF335Q9H4Z2 1342 aaPredicted RBP17.37■□□□□ 0.37
CHMP4C-201ENST00000297265 PXDNQ92626 1479 aa17.37■□□□□ 0.37
CHMP4C-201ENST00000297265 GNAT3A8MTJ3 354 aa17.37■□□□□ 0.37
CHMP4C-201ENST00000297265 PLEKHG5O94827 1062 aa17.37■□□□□ 0.37
CHMP4C-201ENST00000297265 RTF1Q92541 710 aaKnown RBP17.37■□□□□ 0.37
CHMP4C-201ENST00000297265 RGPD5Q99666 1765 aa17.36■□□□□ 0.37
CHMP4C-201ENST00000297265 ZBTB7CA1YPR0 619 aa17.35■□□□□ 0.37
CHMP4C-201ENST00000297265 ZBTB40Q9NUA8 1239 aa17.35■□□□□ 0.37
CHMP4C-201ENST00000297265 DDX19BQ9UMR2 479 aa17.35■□□□□ 0.37
CHMP4C-201ENST00000297265 CAMTA1Q9Y6Y1 1673 aa17.35■□□□□ 0.37
CHMP4C-201ENST00000297265 NPHP3Q7Z494 1330 aa17.35■□□□□ 0.37
CHMP4C-201ENST00000297265 MAP3K5Q99683 1374 aa17.35■□□□□ 0.37
CHMP4C-201ENST00000297265 PDE4AP27815 886 aa17.34■□□□□ 0.37
CHMP4C-201ENST00000297265 BRINP3Q76B58 766 aa17.34■□□□□ 0.37
CHMP4C-201ENST00000297265 ITPRIPQ8IWB1 547 aa17.34■□□□□ 0.37
CHMP4C-201ENST00000297265 BACH2Q9BYV9 841 aa17.34■□□□□ 0.37
CHMP4C-201ENST00000297265 CRYBG1Q9Y4K1 1723 aa17.34■□□□□ 0.37
CHMP4C-201ENST00000297265 ANKRD24Q8TF21 1146 aa17.33■□□□□ 0.37
CHMP4C-201ENST00000297265 COL18A1P39060 1754 aa17.33■□□□□ 0.36
CHMP4C-201ENST00000297265 ABCC4O15439 1325 aa17.33■□□□□ 0.36
CHMP4C-201ENST00000297265 ZC3H6P61129 1189 aaKnown RBP17.33■□□□□ 0.36
CHMP4C-201ENST00000297265 CEMIPQ8WUJ3 1361 aa17.32■□□□□ 0.36
CHMP4C-201ENST00000297265 SPATA31A3Q5VYP0 1347 aa17.32■□□□□ 0.36
CHMP4C-201ENST00000297265 ZBTB7BO15156 539 aaPredicted RBP17.32■□□□□ 0.36
CHMP4C-201ENST00000297265 TSPYL4Q9UJ04 414 aa17.32■□□□□ 0.36
CHMP4C-201ENST00000297265 TNS3Q68CZ2 1445 aa17.32■□□□□ 0.36
CHMP4C-201ENST00000297265 LMO7Q8WWI1 1683 aa17.31■□□□□ 0.36
CHMP4C-201ENST00000297265 ERBB3P21860 1342 aa17.31■□□□□ 0.36
CHMP4C-201ENST00000297265 CABLES1Q8TDN4 633 aa17.31■□□□□ 0.36
CHMP4C-201ENST00000297265 RGS12O14924 1447 aa17.3■□□□□ 0.36
CHMP4C-201ENST00000297265 LGR6Q9HBX8 967 aa17.29■□□□□ 0.36
CHMP4C-201ENST00000297265 SLAIN2Q9P270 581 aa17.29■□□□□ 0.36
CHMP4C-201ENST00000297265 HDAC1Q13547 482 aaPredicted RBP17.29■□□□□ 0.36
CHMP4C-201ENST00000297265 TAF7Q15545 349 aaPredicted RBP17.29■□□□□ 0.36
CHMP4C-201ENST00000297265 RWDD1Q9H446 243 aaPredicted RBP17.29■□□□□ 0.36
CHMP4C-201ENST00000297265 RGS3P49796 1198 aa17.28■□□□□ 0.36
CHMP4C-201ENST00000297265 BABAM1Q9NWV8 329 aa17.28■□□□□ 0.36
CHMP4C-201ENST00000297265 MSH5O43196 834 aa17.27■□□□□ 0.36
CHMP4C-201ENST00000297265 HAP1P54257 671 aaPredicted RBP17.27■□□□□ 0.36
CHMP4C-201ENST00000297265 SOS2Q07890 1332 aaPredicted RBP17.27■□□□□ 0.35
CHMP4C-201ENST00000297265 API5Q9BZZ5 524 aaKnown RBP17.27■□□□□ 0.35
CHMP4C-201ENST00000297265 FAM208AQ9UK61 1670 aaKnown RBP17.25■□□□□ 0.35
CHMP4C-201ENST00000297265 SLC4A2P04920 1241 aa17.25■□□□□ 0.35
CHMP4C-201ENST00000297265 C8orf34Q49A92 452 aa17.25■□□□□ 0.35
CHMP4C-201ENST00000297265 PLEKHO1Q53GL0 409 aaPredicted RBP17.25■□□□□ 0.35
CHMP4C-201ENST00000297265 AKAP4Q5JQC9 854 aa17.25■□□□□ 0.35
CHMP4C-201ENST00000297265 PDZRN3Q9UPQ7 1066 aa17.25■□□□□ 0.35
CHMP4C-201ENST00000297265 VIRMAQ69YN4 1812 aaKnown RBP17.25■□□□□ 0.35
CHMP4C-201ENST00000297265 AMOTQ4VCS5 1084 aa17.24■□□□□ 0.35
CHMP4C-201ENST00000297265 INTS3Q68E01 1043 aaKnown RBP17.24■□□□□ 0.35
CHMP4C-201ENST00000297265 CPDO75976 1380 aa17.24■□□□□ 0.35
CHMP4C-201ENST00000297265 G2E3Q7L622 706 aa17.24■□□□□ 0.35
CHMP4C-201ENST00000297265 ZNF530Q6P9A1 599 aaPredicted RBP17.23■□□□□ 0.35
CHMP4C-201ENST00000297265 SMC5Q8IY18 1101 aa17.23■□□□□ 0.35
CHMP4C-201ENST00000297265 PTPRCP08575 1304 aa17.23■□□□□ 0.35
CHMP4C-201ENST00000297265 CHRNA2Q15822 529 aa17.22■□□□□ 0.35
CHMP4C-201ENST00000297265 KDM3BQ7LBC6 1761 aa17.22■□□□□ 0.35
CHMP4C-201ENST00000297265 ABCC6O95255 1503 aa17.22■□□□□ 0.35
CHMP4C-201ENST00000297265 MPRIPQ6WCQ1 1025 aa17.22■□□□□ 0.35
CHMP4C-201ENST00000297265 SIRT2Q8IXJ6 389 aa17.22■□□□□ 0.35
CHMP4C-201ENST00000297265 ADAMTS7Q9UKP4 1686 aa17.22■□□□□ 0.35
CHMP4C-201ENST00000297265 RNMTO43148 476 aaKnown RBP17.2■□□□□ 0.34
CHMP4C-201ENST00000297265 KCNQ3O43525 872 aa17.2■□□□□ 0.34
CHMP4C-201ENST00000297265 FAM161AQ3B820 660 aa17.2■□□□□ 0.34
CHMP4C-201ENST00000297265 SOS1Q07889 1333 aaPredicted RBP17.2■□□□□ 0.34
CHMP4C-201ENST00000297265 EIF4A1P60842 406 aaKnown RBP17.2■□□□□ 0.34
CHMP4C-201ENST00000297265 C1orf115Q9H7X2 142 aa17.2■□□□□ 0.34
CHMP4C-201ENST00000297265 CACNA1FO60840 1977 aa17.19■□□□□ 0.34
CHMP4C-201ENST00000297265 SIPA1L3O60292 1781 aaPredicted RBP17.18■□□□□ 0.34
CHMP4C-201ENST00000297265 CHMP4BQ9H444 224 aaKnown RBP17.18■□□□□ 0.34
CHMP4C-201ENST00000297265 NLRP2Q9NX02 1062 aa17.18■□□□□ 0.34
CHMP4C-201ENST00000297265 OVOS2A0A0G2JMS6 1433 aa17.18■□□□□ 0.34
CHMP4C-201ENST00000297265 MEGF6O75095 1541 aa17.18■□□□□ 0.34
CHMP4C-201ENST00000297265 CCDC30Q5VVM6 783 aa17.17■□□□□ 0.34
CHMP4C-201ENST00000297265 NHSL1Q5SYE7 1610 aa17.17■□□□□ 0.34
CHMP4C-201ENST00000297265 C1orf141Q5JVX7 400 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms