RNA–Protein interactions for RNA: ENST00000296142.3

RTP3-201, Transcript of receptor transporter protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTP3, Length 1,321 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTP3-201ENST00000296142 LY75O60449 1722 aa11.87□□□□□ -0.51
RTP3-201ENST00000296142 HDGFL2Q7Z4V5 671 aaPredicted RBP11.86□□□□□ -0.51
RTP3-201ENST00000296142 USHBP1Q8N6Y0 703 aa11.86□□□□□ -0.51
RTP3-201ENST00000296142 CARD11Q9BXL7 1154 aa11.86□□□□□ -0.51
RTP3-201ENST00000296142 WWC3Q9ULE0 1092 aa11.86□□□□□ -0.51
RTP3-201ENST00000296142 TIMELESSQ9UNS1 1208 aa11.86□□□□□ -0.51
RTP3-201ENST00000296142 A0A1W2PP64 1363 aa11.86□□□□□ -0.51
RTP3-201ENST00000296142 CEP350Q5VT06 3117 aa11.86□□□□□ -0.51
RTP3-201ENST00000296142 COL24A1Q17RW2 1714 aa11.85□□□□□ -0.51
RTP3-201ENST00000296142 YBX3P16989 372 aaKnown RBP eCLIP11.85□□□□□ -0.51
RTP3-201ENST00000296142 POLD1P28340 1107 aa11.85□□□□□ -0.51
RTP3-201ENST00000296142 DIEXFQ68CQ4 756 aaKnown RBP11.85□□□□□ -0.51
RTP3-201ENST00000296142 SMIM5Q71RC9 77 aa11.85□□□□□ -0.51
RTP3-201ENST00000296142 IP6K1Q92551 441 aa11.85□□□□□ -0.51
RTP3-201ENST00000296142 FAM208AQ9UK61 1670 aaKnown RBP11.84□□□□□ -0.51
RTP3-201ENST00000296142 GIGYF1O75420 1035 aaPredicted RBP11.84□□□□□ -0.51
RTP3-201ENST00000296142 MAP3K19Q56UN5 1328 aa11.83□□□□□ -0.52
RTP3-201ENST00000296142 TAF1LQ8IZX4 1826 aa11.83□□□□□ -0.52
RTP3-201ENST00000296142 EDC4Q6P2E9 1401 aaKnown RBP11.83□□□□□ -0.52
RTP3-201ENST00000296142 MEGF6O75095 1541 aa11.83□□□□□ -0.52
RTP3-201ENST00000296142 COL23A1Q86Y22 540 aaPredicted RBP11.83□□□□□ -0.52
RTP3-201ENST00000296142 CCNL1Q9UK58 526 aaPredicted RBP11.83□□□□□ -0.52
RTP3-201ENST00000296142 MAP3K5Q99683 1374 aa11.82□□□□□ -0.52
RTP3-201ENST00000296142 ITGB4P16144 1822 aa11.82□□□□□ -0.52
RTP3-201ENST00000296142 HOXC9P31274 260 aa11.82□□□□□ -0.52
RTP3-201ENST00000296142 AMPHP49418 695 aa11.82□□□□□ -0.52
RTP3-201ENST00000296142 RRS1Q15050 365 aaKnown RBP11.82□□□□□ -0.52
RTP3-201ENST00000296142 ZNF526Q8TF50 670 aaPredicted RBP11.82□□□□□ -0.52
RTP3-201ENST00000296142 TERF2IPQ9NYB0 399 aa11.82□□□□□ -0.52
RTP3-201ENST00000296142 NSD2O96028 1365 aa11.81□□□□□ -0.52
RTP3-201ENST00000296142 C5P01031 1676 aa11.81□□□□□ -0.52
RTP3-201ENST00000296142 SLC27A3Q5K4L6 730 aa11.81□□□□□ -0.52
RTP3-201ENST00000296142 ZCRB1Q8TBF4 217 aaKnown RBP11.81□□□□□ -0.52
RTP3-201ENST00000296142 SLC16A10Q8TF71 515 aa11.81□□□□□ -0.52
RTP3-201ENST00000296142 COG3Q96JB2 828 aa11.81□□□□□ -0.52
RTP3-201ENST00000296142 NBPF6Q5VWK0 638 aa11.8□□□□□ -0.52
RTP3-201ENST00000296142 NBPF4Q96M43 638 aa11.8□□□□□ -0.52
RTP3-201ENST00000296142 GGNBP2Q9H3C7 697 aa11.8□□□□□ -0.52
RTP3-201ENST00000296142 ANKRD36BQ8N2N9 1353 aa11.8□□□□□ -0.52
RTP3-201ENST00000296142 ST20-MTHFSA0A0A6YYL1 179 aa11.78□□□□□ -0.52
RTP3-201ENST00000296142 AMIGO3Q86WK7 504 aa11.78□□□□□ -0.52
RTP3-201ENST00000296142 USP47Q96K76 1375 aa11.78□□□□□ -0.52
RTP3-201ENST00000296142 MPRIPQ6WCQ1 1025 aa11.77□□□□□ -0.53
RTP3-201ENST00000296142 TOGARAM1Q9Y4F4 1720 aa11.76□□□□□ -0.53
RTP3-201ENST00000296142 ATP10DQ9P241 1426 aa11.76□□□□□ -0.53
RTP3-201ENST00000296142 PHF14O94880 888 aa11.76□□□□□ -0.53
RTP3-201ENST00000296142 UBR3Q6ZT12 1888 aa11.76□□□□□ -0.53
RTP3-201ENST00000296142 KIF20BQ96Q89 1820 aa11.75□□□□□ -0.53
RTP3-201ENST00000296142 HSP90AB2PQ58FF8 381 aa11.75□□□□□ -0.53
RTP3-201ENST00000296142 IFFO2Q5TF58 517 aa11.75□□□□□ -0.53
RTP3-201ENST00000296142 RAPGEF4Q8WZA2 1011 aa11.75□□□□□ -0.53
RTP3-201ENST00000296142 TESK2Q96S53 571 aa11.75□□□□□ -0.53
RTP3-201ENST00000296142 TONSLQ96HA7 1378 aa11.74□□□□□ -0.53
RTP3-201ENST00000296142 MAP2P11137 1827 aaKnown RBP11.74□□□□□ -0.53
RTP3-201ENST00000296142 C4BP0C0L5 1744 aa11.74□□□□□ -0.53
RTP3-201ENST00000296142 FYB1O15117 783 aa11.73□□□□□ -0.53
RTP3-201ENST00000296142 GRIN3BO60391 1043 aa11.73□□□□□ -0.53
RTP3-201ENST00000296142 N4BP2Q86UW6 1770 aaPredicted RBP11.73□□□□□ -0.53
RTP3-201ENST00000296142 PALLDQ8WX93 1383 aa11.72□□□□□ -0.53
RTP3-201ENST00000296142 CYP27B1O15528 508 aa11.72□□□□□ -0.53
RTP3-201ENST00000296142 TATP17735 454 aaPredicted RBP11.72□□□□□ -0.53
RTP3-201ENST00000296142 GPBP1L1Q9HC44 474 aaPredicted RBP11.72□□□□□ -0.53
RTP3-201ENST00000296142 PPM1GO15355 546 aaPredicted RBP11.71□□□□□ -0.53
RTP3-201ENST00000296142 CENPBP07199 599 aaPredicted RBP11.71□□□□□ -0.53
RTP3-201ENST00000296142 AK7Q96M32 723 aa11.7□□□□□ -0.54
RTP3-201ENST00000296142 EMILIN1Q9Y6C2 1016 aa11.7□□□□□ -0.54
RTP3-201ENST00000296142 IGSF1Q8N6C5 1336 aa11.69□□□□□ -0.54
RTP3-201ENST00000296142 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.69□□□□□ -0.54
RTP3-201ENST00000296142 PIGBQ92521 554 aa11.69□□□□□ -0.54
RTP3-201ENST00000296142 PCDH11XQ9BZA7 1347 aa11.69□□□□□ -0.54
RTP3-201ENST00000296142 PCDH11YQ9BZA8 1340 aa11.69□□□□□ -0.54
RTP3-201ENST00000296142 SMG6Q86US8 1419 aaKnown RBP11.68□□□□□ -0.54
RTP3-201ENST00000296142 LINC00116Q8NCU8 138 aa11.68□□□□□ -0.54
RTP3-201ENST00000296142 CD2APQ9Y5K6 639 aa11.68□□□□□ -0.54
RTP3-201ENST00000296142 PKD1L3Q7Z443 1732 aa11.68□□□□□ -0.54
RTP3-201ENST00000296142 PUS7Q96PZ0 661 aaKnown RBP11.67□□□□□ -0.54
RTP3-201ENST00000296142 ASAP1Q9ULH1 1129 aa11.67□□□□□ -0.54
RTP3-201ENST00000296142 RTL1A6NKG5 1358 aa11.67□□□□□ -0.54
RTP3-201ENST00000296142 ITPK1Q13572 414 aa11.66□□□□□ -0.54
RTP3-201ENST00000296142 CARD14Q9BXL6 1004 aa11.66□□□□□ -0.54
RTP3-201ENST00000296142 INSRP06213 1382 aa11.66□□□□□ -0.54
RTP3-201ENST00000296142 MYH14Q7Z406 1995 aaKnown RBP11.65□□□□□ -0.54
RTP3-201ENST00000296142 FLT4P35916 1363 aa11.65□□□□□ -0.54
RTP3-201ENST00000296142 GNPATO15228 680 aa11.65□□□□□ -0.54
RTP3-201ENST00000296142 HSPA6P17066 643 aa11.65□□□□□ -0.54
RTP3-201ENST00000296142 FLAD1Q8NFF5 587 aa11.65□□□□□ -0.54
RTP3-201ENST00000296142 CGNL1Q0VF96 1302 aa11.65□□□□□ -0.54
RTP3-201ENST00000296142 ADCY9O60503 1353 aa11.64□□□□□ -0.55
RTP3-201ENST00000296142 LOC102724428A0A0B4J2F2 783 aa11.64□□□□□ -0.55
RTP3-201ENST00000296142 TNNT2P45379 298 aaPredicted RBP11.64□□□□□ -0.55
RTP3-201ENST00000296142 SIK1P57059 783 aa11.64□□□□□ -0.55
RTP3-201ENST00000296142 TMF1P82094 1093 aa11.64□□□□□ -0.55
RTP3-201ENST00000296142 POLR3GLQ9BT43 218 aa11.64□□□□□ -0.55
RTP3-201ENST00000296142 KIAA1551Q9HCM1 1747 aa11.64□□□□□ -0.55
RTP3-201ENST00000296142 A0A0G2JLW4 131 aa11.63□□□□□ -0.55
RTP3-201ENST00000296142 ATP6V1AP38606 617 aa11.63□□□□□ -0.55
RTP3-201ENST00000296142 SMARCC1Q92922 1105 aaPredicted RBP11.63□□□□□ -0.55
RTP3-201ENST00000296142 EYA1Q99502 592 aa11.63□□□□□ -0.55
RTP3-201ENST00000296142 KIF3CO14782 793 aa11.62□□□□□ -0.55
RTP3-201ENST00000296142 MMP10P09238 476 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms