RNA–Protein interactions for RNA: ENST00000295400.10

TGFA-201, Transcript of transforming growth factor alpha, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFA, Length 4,310 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFA-201ENST00000295400 FLIIQ13045 1269 aa13.95□□□□□ -0.18
TGFA-201ENST00000295400 WASHC4Q2M389 1173 aa13.95□□□□□ -0.18
TGFA-201ENST00000295400 CFAP65Q6ZU64 1925 aaKnown RBP13.95□□□□□ -0.18
TGFA-201ENST00000295400 ACEP12821 1306 aa13.95□□□□□ -0.18
TGFA-201ENST00000295400 SHANK2Q9UPX8 1470 aa13.94□□□□□ -0.18
TGFA-201ENST00000295400 FAM177BA6PVY3 158 aa13.94□□□□□ -0.18
TGFA-201ENST00000295400 SMC5Q8IY18 1101 aa13.94□□□□□ -0.18
TGFA-201ENST00000295400 JARID2Q92833 1246 aaPredicted RBP13.94□□□□□ -0.18
TGFA-201ENST00000295400 ABCC10Q5T3U5 1492 aa13.94□□□□□ -0.18
TGFA-201ENST00000295400 BTBD11A6QL63 1104 aa13.94□□□□□ -0.18
TGFA-201ENST00000295400 FMNL2Q96PY5 1086 aa13.94□□□□□ -0.18
TGFA-201ENST00000295400 CPLX1O14810 134 aa13.94□□□□□ -0.18
TGFA-201ENST00000295400 PLEKHO1Q53GL0 409 aaPredicted RBP13.94□□□□□ -0.18
TGFA-201ENST00000295400 STK11IPQ8N1F8 1099 aa13.94□□□□□ -0.18
TGFA-201ENST00000295400 AMOTL2Q9Y2J4 779 aa13.94□□□□□ -0.18
TGFA-201ENST00000295400 GCC2Q8IWJ2 1684 aa13.94□□□□□ -0.18
TGFA-201ENST00000295400 CASTP20810 708 aaKnown RBP13.94□□□□□ -0.18
TGFA-201ENST00000295400 TTC22Q5TAA0 569 aa13.94□□□□□ -0.18
TGFA-201ENST00000295400 CCDC83Q8IWF9 413 aa13.94□□□□□ -0.18
TGFA-201ENST00000295400 BLMP54132 1417 aaPredicted RBP13.93□□□□□ -0.18
TGFA-201ENST00000295400 ASXL2Q76L83 1435 aa13.93□□□□□ -0.18
TGFA-201ENST00000295400 MCM2P49736 904 aa13.93□□□□□ -0.18
TGFA-201ENST00000295400 EVA1CP58658 441 aa13.93□□□□□ -0.18
TGFA-201ENST00000295400 CCDC8Q9H0W5 538 aaPredicted RBP13.93□□□□□ -0.18
TGFA-201ENST00000295400 MBD5Q9P267 1494 aa13.93□□□□□ -0.18
TGFA-201ENST00000295400 ZMYM4Q5VZL5 1548 aa13.93□□□□□ -0.18
TGFA-201ENST00000295400 SASS6Q6UVJ0 657 aa13.93□□□□□ -0.18
TGFA-201ENST00000295400 ZGPATQ8N5A5 531 aaKnown RBP13.93□□□□□ -0.18
TGFA-201ENST00000295400 PRPF40BQ6NWY9 871 aaKnown RBP13.92□□□□□ -0.18
TGFA-201ENST00000295400 BOLA2Q9H3K6 86 aa13.92□□□□□ -0.18
TGFA-201ENST00000295400 CYP46A1Q9Y6A2 500 aa13.92□□□□□ -0.18
TGFA-201ENST00000295400 EIF4A2Q14240 407 aaKnown RBP13.92□□□□□ -0.18
TGFA-201ENST00000295400 LARP1BQ659C4 914 aaKnown RBP13.92□□□□□ -0.18
TGFA-201ENST00000295400 DDX11Q96FC9 970 aa13.91□□□□□ -0.18
TGFA-201ENST00000295400 TRIM5Q9C035 493 aa13.91□□□□□ -0.18
TGFA-201ENST00000295400 KIF3AQ9Y496 699 aa13.91□□□□□ -0.18
TGFA-201ENST00000295400 CAMK4Q16566 473 aa13.91□□□□□ -0.18
TGFA-201ENST00000295400 CCDC39Q9UFE4 941 aa13.91□□□□□ -0.18
TGFA-201ENST00000295400 IL16Q14005 1332 aa13.91□□□□□ -0.18
TGFA-201ENST00000295400 ZBTB7BO15156 539 aaPredicted RBP13.91□□□□□ -0.18
TGFA-201ENST00000295400 WDR33Q9C0J8 1336 aaKnown RBP13.91□□□□□ -0.18
TGFA-201ENST00000295400 G2E3Q7L622 706 aa13.9□□□□□ -0.18
TGFA-201ENST00000295400 TCEANC2Q96MN5 208 aa13.9□□□□□ -0.18
TGFA-201ENST00000295400 NSD2O96028 1365 aa13.9□□□□□ -0.18
TGFA-201ENST00000295400 PI4KAP2A4QPH2 592 aa13.9□□□□□ -0.18
TGFA-201ENST00000295400 ATP2B1P20020 1258 aa13.9□□□□□ -0.18
TGFA-201ENST00000295400 PI4KAP1Q8N8J0 262 aa13.9□□□□□ -0.18
TGFA-201ENST00000295400 PDRG1Q9NUG6 133 aa13.9□□□□□ -0.18
TGFA-201ENST00000295400 KDM5CP41229 1560 aa13.89□□□□□ -0.19
TGFA-201ENST00000295400 GTF2E1P29083 439 aaPredicted RBP13.89□□□□□ -0.19
TGFA-201ENST00000295400 PPP1R42Q7Z4L9 355 aa13.89□□□□□ -0.19
TGFA-201ENST00000295400 CCAR2Q8N163 923 aaKnown RBP13.89□□□□□ -0.19
TGFA-201ENST00000295400 SDF4Q9BRK5 362 aa13.89□□□□□ -0.19
TGFA-201ENST00000295400 CEP170Q5SW79 1584 aa13.89□□□□□ -0.19
TGFA-201ENST00000295400 PLEKHM2Q8IWE5 1019 aa13.89□□□□□ -0.19
TGFA-201ENST00000295400 TARBP1Q13395 1621 aaKnown RBP13.89□□□□□ -0.19
TGFA-201ENST00000295400 PBRM1Q86U86 1689 aa13.89□□□□□ -0.19
TGFA-201ENST00000295400 PROSER2Q86WR7 435 aaPredicted RBP13.89□□□□□ -0.19
TGFA-201ENST00000295400 THEMISQ8N1K5 641 aaPredicted RBP13.89□□□□□ -0.19
TGFA-201ENST00000295400 ZNF521Q96K83 1311 aa13.88□□□□□ -0.19
TGFA-201ENST00000295400 PDE1AP54750 535 aa13.88□□□□□ -0.19
TGFA-201ENST00000295400 TPM4P67936 248 aa13.88□□□□□ -0.19
TGFA-201ENST00000295400 ZSCAN30Q86W11 494 aa13.88□□□□□ -0.19
TGFA-201ENST00000295400 ANKRD44Q8N8A2 993 aa13.88□□□□□ -0.19
TGFA-201ENST00000295400 PLA2R1Q13018 1463 aa13.88□□□□□ -0.19
TGFA-201ENST00000295400 PSMA5P28066 241 aa13.88□□□□□ -0.19
TGFA-201ENST00000295400 MTHFSDQ2M296 383 aaKnown RBP13.88□□□□□ -0.19
TGFA-201ENST00000295400 CCDC73Q6ZRK6 1079 aa13.88□□□□□ -0.19
TGFA-201ENST00000295400 TMX3Q96JJ7 454 aa13.88□□□□□ -0.19
TGFA-201ENST00000295400 CDK11BP21127 795 aaKnown RBP13.87□□□□□ -0.19
TGFA-201ENST00000295400 RASSF8Q8NHQ8 419 aa13.87□□□□□ -0.19
TGFA-201ENST00000295400 PTPRTO14522 1441 aa13.87□□□□□ -0.19
TGFA-201ENST00000295400 PES1O00541 588 aaKnown RBP13.87□□□□□ -0.19
TGFA-201ENST00000295400 RRAGDQ9NQL2 400 aaPredicted RBP13.87□□□□□ -0.19
TGFA-201ENST00000295400 STRN4Q9NRL3 753 aa13.87□□□□□ -0.19
TGFA-201ENST00000295400 BLOC1S2Q6QNY1 142 aa13.87□□□□□ -0.19
TGFA-201ENST00000295400 KIF1BPQ96EK5 621 aa13.87□□□□□ -0.19
TGFA-201ENST00000295400 BCORL1Q5H9F3 1711 aa13.86□□□□□ -0.19
TGFA-201ENST00000295400 PIP4K2AP48426 406 aaPredicted RBP13.86□□□□□ -0.19
TGFA-201ENST00000295400 CHAMP1Q96JM3 812 aa13.86□□□□□ -0.19
TGFA-201ENST00000295400 TFIP11Q9UBB9 837 aaKnown RBP13.86□□□□□ -0.19
TGFA-201ENST00000295400 USP25Q9UHP3 1055 aa13.86□□□□□ -0.19
TGFA-201ENST00000295400 NFXL1Q6ZNB6 911 aa13.86□□□□□ -0.19
TGFA-201ENST00000295400 ARHGAP45Q92619 1136 aa13.86□□□□□ -0.19
TGFA-201ENST00000295400 TTC21BQ7Z4L5 1316 aa13.86□□□□□ -0.19
TGFA-201ENST00000295400 CEP85Q6P2H3 762 aa13.86□□□□□ -0.19
TGFA-201ENST00000295400 TRMT2AQ8IZ69 625 aaKnown RBP13.86□□□□□ -0.19
TGFA-201ENST00000295400 ATF3P18847 181 aa13.86□□□□□ -0.19
TGFA-201ENST00000295400 PTCD1O75127 700 aaKnown RBP13.85□□□□□ -0.19
TGFA-201ENST00000295400 FKBP4Q02790 459 aaKnown RBP eCLIP13.85□□□□□ -0.19
TGFA-201ENST00000295400 DCTPP1Q9H773 170 aa13.85□□□□□ -0.19
TGFA-201ENST00000295400 DNAAF4Q8WXU2 420 aa13.85□□□□□ -0.19
TGFA-201ENST00000295400 ZNF830Q96NB3 372 aaPredicted RBP13.85□□□□□ -0.19
TGFA-201ENST00000295400 UQCRHLA0A096LP55 91 aa13.85□□□□□ -0.19
TGFA-201ENST00000295400 UQCRHP07919 91 aa13.85□□□□□ -0.19
TGFA-201ENST00000295400 TRDNQ13061 729 aa13.85□□□□□ -0.19
TGFA-201ENST00000295400 RALYLQ86SE5 291 aaKnown RBP13.85□□□□□ -0.19
TGFA-201ENST00000295400 ZSCAN23Q3MJ62 389 aa13.84□□□□□ -0.19
TGFA-201ENST00000295400 PPIP5K1Q6PFW1 1433 aa13.84□□□□□ -0.19
TGFA-201ENST00000295400 HOMER1Q86YM7 354 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms