RNA–Protein interactions for RNA: ENST00000294623.8

FUBP1-201, Transcript of far upstream element binding protein 1, humanhuman

TSL 1 (best)

Gene FUBP1, Length 2,201 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FUBP1-201ENST00000294623 MRPL50Q8N5N7 158 aaKnown RBP17.2■□□□□ 0.34
FUBP1-201ENST00000294623 NSFL1CQ9UNZ2 370 aaKnown RBP17.2■□□□□ 0.34
FUBP1-201ENST00000294623 PLCH2O75038 1416 aa17.2■□□□□ 0.34
FUBP1-201ENST00000294623 ZFYVE16Q7Z3T8 1539 aa17.19■□□□□ 0.34
FUBP1-201ENST00000294623 RIOK3O14730 519 aaKnown RBP17.19■□□□□ 0.34
FUBP1-201ENST00000294623 MORC2Q9Y6X9 1032 aaPredicted RBP17.19■□□□□ 0.34
FUBP1-201ENST00000294623 ADGRB3O60242 1522 aa17.19■□□□□ 0.34
FUBP1-201ENST00000294623 SMTNL1A8MU46 457 aa17.19■□□□□ 0.34
FUBP1-201ENST00000294623 MX1P20591 662 aa17.19■□□□□ 0.34
FUBP1-201ENST00000294623 ZFYVE9O95405 1425 aa17.18■□□□□ 0.34
FUBP1-201ENST00000294623 ADGRB1O14514 1584 aa17.18■□□□□ 0.34
FUBP1-201ENST00000294623 SIRT2Q8IXJ6 389 aa17.17■□□□□ 0.34
FUBP1-201ENST00000294623 TMX3Q96JJ7 454 aa17.17■□□□□ 0.34
FUBP1-201ENST00000294623 DNAJC2Q99543 621 aaKnown RBP17.17■□□□□ 0.34
FUBP1-201ENST00000294623 DDX41Q9UJV9 622 aaKnown RBP17.17■□□□□ 0.34
FUBP1-201ENST00000294623 PAXBP1Q9Y5B6 917 aa17.17■□□□□ 0.34
FUBP1-201ENST00000294623 RTL1A6NKG5 1358 aa17.17■□□□□ 0.34
FUBP1-201ENST00000294623 CALCOCO1Q9P1Z2 691 aa17.17■□□□□ 0.34
FUBP1-201ENST00000294623 FAM135BQ49AJ0 1406 aa17.17■□□□□ 0.34
FUBP1-201ENST00000294623 FRMPD1Q5SYB0 1578 aa17.16■□□□□ 0.34
FUBP1-201ENST00000294623 RPAP2Q8IXW5 612 aaPredicted RBP17.16■□□□□ 0.34
FUBP1-201ENST00000294623 CTNNA3Q9UI47 895 aa17.16■□□□□ 0.34
FUBP1-201ENST00000294623 MROH2AA6NES4 1674 aa17.16■□□□□ 0.34
FUBP1-201ENST00000294623 U2AF2P26368 475 aaKnown RBP eCLIP17.16■□□□□ 0.343e-8■■■□□ 16.4
FUBP1-201ENST00000294623 TTC12Q9H892 705 aaPredicted RBP17.16■□□□□ 0.34
FUBP1-201ENST00000294623 PPLO60437 1756 aa17.16■□□□□ 0.34
FUBP1-201ENST00000294623 RGS12O14924 1447 aa17.16■□□□□ 0.34
FUBP1-201ENST00000294623 EFCAB6Q5THR3 1501 aa17.15■□□□□ 0.34
FUBP1-201ENST00000294623 LMTK2Q8IWU2 1503 aa17.15■□□□□ 0.34
FUBP1-201ENST00000294623 SLC12A5Q9H2X9 1139 aa17.15■□□□□ 0.34
FUBP1-201ENST00000294623 PNPLA6Q8IY17 1366 aa17.15■□□□□ 0.34
FUBP1-201ENST00000294623 TIGD1Q96MW7 591 aa17.15■□□□□ 0.34
FUBP1-201ENST00000294623 OSBPL3Q9H4L5 887 aa17.15■□□□□ 0.34
FUBP1-201ENST00000294623 EVC2Q86UK5 1308 aa17.14■□□□□ 0.33
FUBP1-201ENST00000294623 ADGRF5Q8IZF2 1346 aa17.14■□□□□ 0.33
FUBP1-201ENST00000294623 KNDC1Q76NI1 1749 aa17.14■□□□□ 0.33
FUBP1-201ENST00000294623 HAP1P54257 671 aaPredicted RBP17.14■□□□□ 0.33
FUBP1-201ENST00000294623 UBE2HP62256 183 aa17.14■□□□□ 0.33
FUBP1-201ENST00000294623 EFCAB2Q5VUJ9 269 aa17.14■□□□□ 0.33
FUBP1-201ENST00000294623 ATP6V1DQ9Y5K8 247 aa17.14■□□□□ 0.33
FUBP1-201ENST00000294623 SPDYE4A6NLX3 237 aa17.13■□□□□ 0.33
FUBP1-201ENST00000294623 FCHSD2O94868 740 aa17.13■□□□□ 0.33
FUBP1-201ENST00000294623 SLFN14P0C7P3 912 aa17.13■□□□□ 0.33
FUBP1-201ENST00000294623 PDIA4P13667 645 aaKnown RBP17.13■□□□□ 0.33
FUBP1-201ENST00000294623 NCBP1Q09161 790 aaKnown RBP17.13■□□□□ 0.33
FUBP1-201ENST00000294623 ANKRD44Q8N8A2 993 aa17.13■□□□□ 0.33
FUBP1-201ENST00000294623 TSC1Q92574 1164 aa17.13■□□□□ 0.33
FUBP1-201ENST00000294623 ZCCHC11Q5TAX3 1644 aaKnown RBP17.13■□□□□ 0.33
FUBP1-201ENST00000294623 VAMP4O75379 141 aa17.12■□□□□ 0.33
FUBP1-201ENST00000294623 SDSP20132 328 aa17.12■□□□□ 0.33
FUBP1-201ENST00000294623 GNAI1P63096 354 aa17.12■□□□□ 0.33
FUBP1-201ENST00000294623 KRT222Q8N1A0 295 aa17.12■□□□□ 0.33
FUBP1-201ENST00000294623 IFT57Q9NWB7 429 aa17.12■□□□□ 0.33
FUBP1-201ENST00000294623 RPAP1Q9BWH6 1393 aaPredicted RBP17.12■□□□□ 0.33
FUBP1-201ENST00000294623 RNF20Q5VTR2 975 aa17.12■□□□□ 0.33
FUBP1-201ENST00000294623 USP48Q86UV5 1035 aa17.11■□□□□ 0.33
FUBP1-201ENST00000294623 FUCA2Q9BTY2 467 aa17.11■□□□□ 0.33
FUBP1-201ENST00000294623 RPGRIP1LQ68CZ1 1315 aa17.11■□□□□ 0.33
FUBP1-201ENST00000294623 ARHGEF28Q8N1W1 1705 aaKnown RBP17.11■□□□□ 0.33
FUBP1-201ENST00000294623 TERF2Q15554 542 aa17.11■□□□□ 0.33
FUBP1-201ENST00000294623 SLFNL1Q499Z3 407 aa17.11■□□□□ 0.33
FUBP1-201ENST00000294623 TAF7LQ5H9L4 462 aa17.11■□□□□ 0.33
FUBP1-201ENST00000294623 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.11■□□□□ 0.33
FUBP1-201ENST00000294623 C14orf93Q9H972 538 aaKnown RBP17.11■□□□□ 0.33
FUBP1-201ENST00000294623 TULP4Q9NRJ4 1543 aa17.1■□□□□ 0.33
FUBP1-201ENST00000294623 GLI2P10070 1586 aa17.1■□□□□ 0.33
FUBP1-201ENST00000294623 ZNF830Q96NB3 372 aaPredicted RBP17.1■□□□□ 0.33
FUBP1-201ENST00000294623 LRRC7Q96NW7 1537 aa17.1■□□□□ 0.33
FUBP1-201ENST00000294623 ATP10DQ9P241 1426 aa17.09■□□□□ 0.33
FUBP1-201ENST00000294623 U2SURPO15042 1029 aaKnown RBP17.09■□□□□ 0.33
FUBP1-201ENST00000294623 NEK4P51957 841 aa17.09■□□□□ 0.33
FUBP1-201ENST00000294623 ZNF397Q8NF99 534 aaPredicted RBP17.09■□□□□ 0.33
FUBP1-201ENST00000294623 SPAG9O60271 1321 aaKnown RBP17.09■□□□□ 0.33
FUBP1-201ENST00000294623 FAM53CQ9NYF3 392 aa17.09■□□□□ 0.33
FUBP1-201ENST00000294623 TUBGCP6Q96RT7 1819 aa17.09■□□□□ 0.33
FUBP1-201ENST00000294623 MROH1Q8NDA8 1641 aa17.09■□□□□ 0.33
FUBP1-201ENST00000294623 DIAPH1O60610 1272 aaKnown RBP17.08■□□□□ 0.33
FUBP1-201ENST00000294623 CPSF1Q10570 1443 aaKnown RBP17.08■□□□□ 0.32
FUBP1-201ENST00000294623 KIF18AQ8NI77 898 aa17.08■□□□□ 0.32
FUBP1-201ENST00000294623 JARID2Q92833 1246 aaPredicted RBP17.08■□□□□ 0.32
FUBP1-201ENST00000294623 KCNF1Q9H3M0 494 aa17.08■□□□□ 0.32
FUBP1-201ENST00000294623 TULP2O00295 520 aa17.07■□□□□ 0.32
FUBP1-201ENST00000294623 HCLS1P14317 486 aaPredicted RBP17.07■□□□□ 0.32
FUBP1-201ENST00000294623 LMOD3Q0VAK6 560 aa17.07■□□□□ 0.32
FUBP1-201ENST00000294623 C1orf115Q9H7X2 142 aa17.06■□□□□ 0.32
FUBP1-201ENST00000294623 PYCARDQ9ULZ3 195 aa17.06■□□□□ 0.32
FUBP1-201ENST00000294623 CLTCQ00610 1675 aaKnown RBP17.06■□□□□ 0.32
FUBP1-201ENST00000294623 IRX5P78411 483 aaPredicted RBP17.06■□□□□ 0.32
FUBP1-201ENST00000294623 CCDC112Q8NEF3 446 aa17.06■□□□□ 0.32
FUBP1-201ENST00000294623 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.06■□□□□ 0.32
FUBP1-201ENST00000294623 ATP7AQ04656 1500 aa17.06■□□□□ 0.32
FUBP1-201ENST00000294623 KIF20BQ96Q89 1820 aa17.05■□□□□ 0.32
FUBP1-201ENST00000294623 HMMRO75330 724 aa17.05■□□□□ 0.32
FUBP1-201ENST00000294623 ZNF853P0CG23 659 aa17.05■□□□□ 0.32
FUBP1-201ENST00000294623 CCDC192P0DO97 292 aa17.05■□□□□ 0.32
FUBP1-201ENST00000294623 GADD45BO75293 160 aaPredicted RBP17.05■□□□□ 0.32
FUBP1-201ENST00000294623 CCDC171Q6TFL3 1326 aa17.04■□□□□ 0.32
FUBP1-201ENST00000294623 NEMFO60524 1076 aa17.04■□□□□ 0.32
FUBP1-201ENST00000294623 NFE2L2Q16236 605 aa17.04■□□□□ 0.32
FUBP1-201ENST00000294623 C17orf53Q8N3J3 647 aaPredicted RBP17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms