RNA–Protein interactions for RNA: ENST00000291386.3

SSU72-201, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSU72, Length 1,290 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-201ENST00000291386 CCDC125Q86Z20 511 aa36.22■■■■□ 3.39
SSU72-201ENST00000291386 KDRP35968 1356 aa36.22■■■■□ 3.39
SSU72-201ENST00000291386 PKD1L3Q7Z443 1732 aa36.21■■■■□ 3.39
SSU72-201ENST00000291386 ZCRB1Q8TBF4 217 aaKnown RBP36.21■■■■□ 3.39
SSU72-201ENST00000291386 EP400Q96L91 3159 aa36.19■■■■□ 3.38
SSU72-201ENST00000291386 PRKRIP1Q9H875 184 aaPredicted RBP36.18■■■■□ 3.38
SSU72-201ENST00000291386 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP36.17■■■■□ 3.382e-6■□□□□ 10.3
SSU72-201ENST00000291386 MYBBP1AQ9BQG0 1328 aaKnown RBP36.16■■■■□ 3.38
SSU72-201ENST00000291386 SBF2Q86WG5 1849 aa36.15■■■■□ 3.38
SSU72-201ENST00000291386 SULT6B1Q6IMI4 303 aa36.15■■■■□ 3.38
SSU72-201ENST00000291386 AEBP1Q8IUX7 1158 aa36.13■■■■□ 3.37
SSU72-201ENST00000291386 PCDH11XQ9BZA7 1347 aa36.11■■■■□ 3.37
SSU72-201ENST00000291386 PCDH11YQ9BZA8 1340 aa36.11■■■■□ 3.37
SSU72-201ENST00000291386 DDX54Q8TDD1 881 aaKnown RBP36.11■■■■□ 3.37
SSU72-201ENST00000291386 SPG7Q9UQ90 795 aa36.11■■■■□ 3.37
SSU72-201ENST00000291386 NUDCQ9Y266 331 aa36.1■■■■□ 3.37
SSU72-201ENST00000291386 TNS1Q9HBL0 1735 aaKnown RBP36.08■■■■□ 3.37
SSU72-201ENST00000291386 U2SURPO15042 1029 aaKnown RBP36.06■■■■□ 3.36
SSU72-201ENST00000291386 CYP27B1O15528 508 aa36.05■■■■□ 3.36
SSU72-201ENST00000291386 TRIM37O94972 964 aa36.05■■■■□ 3.36
SSU72-201ENST00000291386 HMOX1P09601 288 aa36.05■■■■□ 3.36
SSU72-201ENST00000291386 AMOTQ4VCS5 1084 aa36.05■■■■□ 3.36
SSU72-201ENST00000291386 SF3B2Q13435 895 aaKnown RBP36.04■■■■□ 3.36
SSU72-201ENST00000291386 PLEKHO1Q53GL0 409 aaPredicted RBP36.04■■■■□ 3.36
SSU72-201ENST00000291386 NHSQ6T4R5 1651 aa36.03■■■■□ 3.36
SSU72-201ENST00000291386 NKX1-1Q15270 411 aaPredicted RBP36.01■■■■□ 3.36
SSU72-201ENST00000291386 BCL11BQ9C0K0 894 aaPredicted RBP36.01■■■■□ 3.36
SSU72-201ENST00000291386 IFNL2Q8IZJ0 200 aa35.99■■■■□ 3.35
SSU72-201ENST00000291386 DOT1LQ8TEK3 1739 aa35.97■■■■□ 3.35
SSU72-201ENST00000291386 U2AF1L5P0DN76 240 aaPredicted RBP35.97■■■■□ 3.35
SSU72-201ENST00000291386 PHKG2P15735 406 aa35.97■■■■□ 3.35
SSU72-201ENST00000291386 U2AF1Q01081 240 aaKnown RBP eCLIP35.97■■■■□ 3.351e-6■□□□□ 10.2
SSU72-201ENST00000291386 ANP32CO43423 234 aa35.96■■■■□ 3.35
SSU72-201ENST00000291386 FCHSD2O94868 740 aa35.95■■■■□ 3.35
SSU72-201ENST00000291386 BAG6P46379 1132 aa35.95■■■■□ 3.35
SSU72-201ENST00000291386 RSPH6AQ9H0K4 717 aa35.95■■■■□ 3.35
SSU72-201ENST00000291386 ACSBG1Q96GR2 724 aa35.94■■■■□ 3.34
SSU72-201ENST00000291386 KAT6BQ8WYB5 2073 aa35.94■■■■□ 3.34
SSU72-201ENST00000291386 KCNQ2O43526 872 aa35.93■■■■□ 3.34
SSU72-201ENST00000291386 APBA3O96018 575 aa35.92■■■■□ 3.34
SSU72-201ENST00000291386 ZNF530Q6P9A1 599 aaPredicted RBP35.92■■■■□ 3.34
SSU72-201ENST00000291386 PTF1AQ7RTS3 328 aa35.92■■■■□ 3.34
SSU72-201ENST00000291386 DEFB132Q7Z7B7 95 aa35.91■■■■□ 3.34
SSU72-201ENST00000291386 RGPD3A6NKT7 1758 aaPredicted RBP35.9■■■■□ 3.34
SSU72-201ENST00000291386 RGPD4Q7Z3J3 1758 aa35.9■■■■□ 3.34
SSU72-201ENST00000291386 HSP90AB1P08238 724 aaKnown RBP35.9■■■■□ 3.34
SSU72-201ENST00000291386 TOGARAM1Q9Y4F4 1720 aa35.9■■■■□ 3.34
SSU72-201ENST00000291386 BTAF1O14981 1849 aa35.88■■■■□ 3.33
SSU72-201ENST00000291386 PLSCR1O15162 318 aa35.88■■■■□ 3.33
SSU72-201ENST00000291386 PRKAR2BP31323 418 aa35.88■■■■□ 3.33
SSU72-201ENST00000291386 PRIM1P49642 420 aaKnown RBP35.87■■■■□ 3.33
SSU72-201ENST00000291386 MTHFSDQ2M296 383 aaKnown RBP35.87■■■■□ 3.33
SSU72-201ENST00000291386 AKAP4Q5JQC9 854 aa35.86■■■■□ 3.33
SSU72-201ENST00000291386 C1orf141Q5JVX7 400 aa35.86■■■■□ 3.33
SSU72-201ENST00000291386 ITGB4P16144 1822 aa35.85■■■■□ 3.33
SSU72-201ENST00000291386 EN1Q05925 392 aaPredicted RBP35.85■■■■□ 3.33
SSU72-201ENST00000291386 DCAF5Q96JK2 942 aa35.85■■■■□ 3.33
SSU72-201ENST00000291386 CAMKK2Q96RR4 588 aa35.85■■■■□ 3.33
SSU72-201ENST00000291386 GAS2L2Q8NHY3 880 aa35.83■■■■□ 3.33
SSU72-201ENST00000291386 PHACTR3Q96KR7 559 aa35.82■■■■□ 3.32
SSU72-201ENST00000291386 SYTL4Q96C24 671 aaPredicted RBP35.81■■■■□ 3.32
SSU72-201ENST00000291386 PNNQ9H307 717 aaKnown RBP35.81■■■■□ 3.32
SSU72-201ENST00000291386 KDM6AO15550 1401 aaPredicted RBP35.81■■■■□ 3.32
SSU72-201ENST00000291386 SCN11AQ9UI33 1791 aa35.79■■■■□ 3.32
SSU72-201ENST00000291386 ERVV-2B6SEH9 535 aa35.79■■■■□ 3.32
SSU72-201ENST00000291386 PLEKHF1Q96S99 279 aa35.79■■■■□ 3.32
SSU72-201ENST00000291386 RREB1Q92766 1687 aa35.78■■■■□ 3.32
SSU72-201ENST00000291386 ADAMTS7Q9UKP4 1686 aa35.78■■■■□ 3.32
SSU72-201ENST00000291386 EZH2Q15910 746 aaKnown RBP35.78■■■■□ 3.32
SSU72-201ENST00000291386 VIRMAQ69YN4 1812 aaKnown RBP35.76■■■■□ 3.31
SSU72-201ENST00000291386 WDR43Q15061 677 aaKnown RBP eCLIP35.75■■■■□ 3.31
SSU72-201ENST00000291386 MPRIPQ6WCQ1 1025 aa35.75■■■■□ 3.31
SSU72-201ENST00000291386 NEFMP07197 916 aa35.73■■■■□ 3.31
SSU72-201ENST00000291386 PIGBQ92521 554 aa35.73■■■■□ 3.31
SSU72-201ENST00000291386 MAP3K5Q99683 1374 aa35.73■■■■□ 3.31
SSU72-201ENST00000291386 CCDC184Q52MB2 194 aa35.72■■■■□ 3.31
SSU72-201ENST00000291386 TMOD3Q9NYL9 352 aa35.72■■■■□ 3.31
SSU72-201ENST00000291386 GNAT3A8MTJ3 354 aa35.71■■■■□ 3.31
SSU72-201ENST00000291386 LY75O60449 1722 aa35.71■■■■□ 3.31
SSU72-201ENST00000291386 RNMTO43148 476 aaKnown RBP35.7■■■■□ 3.31
SSU72-201ENST00000291386 PROM2Q8N271 834 aa35.7■■■■□ 3.31
SSU72-201ENST00000291386 NUP188Q5SRE5 1749 aa35.69■■■■□ 3.3
SSU72-201ENST00000291386 ADAMTS8Q9UP79 889 aa35.69■■■■□ 3.3
SSU72-201ENST00000291386 MRC1P22897 1456 aa35.68■■■■□ 3.3
SSU72-201ENST00000291386 LGR6Q9HBX8 967 aa35.68■■■■□ 3.3
SSU72-201ENST00000291386 TXNRD1Q16881 649 aa35.67■■■■□ 3.3
SSU72-201ENST00000291386 MAPK8IP3Q9UPT6 1336 aa35.66■■■■□ 3.3
SSU72-201ENST00000291386 CABP4P57796 275 aa35.66■■■■□ 3.3
SSU72-201ENST00000291386 SMARCC1Q92922 1105 aaPredicted RBP35.65■■■■□ 3.3
SSU72-201ENST00000291386 MRS2Q9HD23 443 aa35.65■■■■□ 3.3
SSU72-201ENST00000291386 DLG5Q8TDM6 1919 aa35.64■■■■□ 3.3
SSU72-201ENST00000291386 HTATSF1O43719 755 aaKnown RBP35.64■■■■□ 3.3
SSU72-201ENST00000291386 IL17REQ8NFR9 667 aa35.63■■■■□ 3.29
SSU72-201ENST00000291386 SLC52A2Q9HAB3 445 aa35.63■■■■□ 3.29
SSU72-201ENST00000291386 CEMIPQ8WUJ3 1361 aa35.63■■■■□ 3.29
SSU72-201ENST00000291386 NFE2L2Q16236 605 aa35.62■■■■□ 3.29
SSU72-201ENST00000291386 SLC27A3Q5K4L6 730 aa35.62■■■■□ 3.29
SSU72-201ENST00000291386 NFATC2IPQ8NCF5 419 aa35.62■■■■□ 3.29
SSU72-201ENST00000291386 PNISRQ8TF01 805 aaKnown RBP35.62■■■■□ 3.29
SSU72-201ENST00000291386 PALLDQ8WX93 1383 aa35.62■■■■□ 3.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms