RNA–Protein interactions for RNA: ENST00000289488.6

LRTOMT-201, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, humanhuman

TSL 1 (best) BASIC

Gene LRTOMT, Length 2,332 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTOMT-201ENST00000289488 NFE2L2Q16236 605 aa12.56□□□□□ -0.4
LRTOMT-201ENST00000289488 BTG4Q9NY30 223 aa12.56□□□□□ -0.4
LRTOMT-201ENST00000289488 COL5A2P05997 1499 aaPredicted RBP12.55□□□□□ -0.4
LRTOMT-201ENST00000289488 USP35Q9P2H5 1018 aa12.55□□□□□ -0.4
LRTOMT-201ENST00000289488 LARP1Q6PKG0 1096 aaKnown RBP12.54□□□□□ -0.4
LRTOMT-201ENST00000289488 SLFN5Q08AF3 891 aa12.54□□□□□ -0.4
LRTOMT-201ENST00000289488 DUSP27Q5VZP5 1158 aa12.54□□□□□ -0.4
LRTOMT-201ENST00000289488 MCM10Q7L590 875 aa12.54□□□□□ -0.4
LRTOMT-201ENST00000289488 EP400Q96L91 3159 aa12.53□□□□□ -0.4
LRTOMT-201ENST00000289488 CCDC27Q2M243 656 aa12.53□□□□□ -0.4
LRTOMT-201ENST00000289488 TOM1L2Q6ZVM7 507 aa12.53□□□□□ -0.4
LRTOMT-201ENST00000289488 FAM208AQ9UK61 1670 aaKnown RBP12.53□□□□□ -0.4
LRTOMT-201ENST00000289488 PDE3BQ13370 1112 aa12.53□□□□□ -0.4
LRTOMT-201ENST00000289488 TSR2Q969E8 191 aaKnown RBP12.53□□□□□ -0.4
LRTOMT-201ENST00000289488 WDR17Q8IZU2 1322 aa12.52□□□□□ -0.4
LRTOMT-201ENST00000289488 EVA1CP58658 441 aa12.52□□□□□ -0.41
LRTOMT-201ENST00000289488 LAS1LQ9Y4W2 734 aaKnown RBP12.51□□□□□ -0.41
LRTOMT-201ENST00000289488 NCAPD2Q15021 1401 aa12.51□□□□□ -0.41
LRTOMT-201ENST00000289488 MEGF6O75095 1541 aa12.51□□□□□ -0.41
LRTOMT-201ENST00000289488 ABCC6O95255 1503 aa12.51□□□□□ -0.41
LRTOMT-201ENST00000289488 TRMT2AQ8IZ69 625 aaKnown RBP12.5□□□□□ -0.41
LRTOMT-201ENST00000289488 NGEFQ8N5V2 710 aa12.5□□□□□ -0.41
LRTOMT-201ENST00000289488 JCADQ9P266 1359 aa12.5□□□□□ -0.41
LRTOMT-201ENST00000289488 E9PSI1 815 aa12.5□□□□□ -0.41
LRTOMT-201ENST00000289488 WDR63Q8IWG1 891 aa12.5□□□□□ -0.41
LRTOMT-201ENST00000289488 COL14A1Q05707 1796 aaKnown RBP12.49□□□□□ -0.41
LRTOMT-201ENST00000289488 PLCH1Q4KWH8 1693 aa12.49□□□□□ -0.41
LRTOMT-201ENST00000289488 RAPGEF4Q8WZA2 1011 aa12.49□□□□□ -0.41
LRTOMT-201ENST00000289488 C8orf37Q96NL8 207 aa12.49□□□□□ -0.41
LRTOMT-201ENST00000289488 LRP6O75581 1613 aa12.48□□□□□ -0.41
LRTOMT-201ENST00000289488 RTN4Q9NQC3 1192 aaKnown RBP12.48□□□□□ -0.41
LRTOMT-201ENST00000289488 MIS18AQ9NYP9 233 aa12.48□□□□□ -0.41
LRTOMT-201ENST00000289488 ZNF530Q6P9A1 599 aaPredicted RBP12.48□□□□□ -0.41
LRTOMT-201ENST00000289488 GAS2L2Q8NHY3 880 aa12.48□□□□□ -0.41
LRTOMT-201ENST00000289488 VIRMAQ69YN4 1812 aaKnown RBP12.47□□□□□ -0.41
LRTOMT-201ENST00000289488 GNAT3A8MTJ3 354 aa12.47□□□□□ -0.41
LRTOMT-201ENST00000289488 TCERG1O14776 1098 aaKnown RBP12.47□□□□□ -0.41
LRTOMT-201ENST00000289488 MPRIPQ6WCQ1 1025 aa12.47□□□□□ -0.41
LRTOMT-201ENST00000289488 IL17REQ8NFR9 667 aa12.47□□□□□ -0.41
LRTOMT-201ENST00000289488 LGR6Q9HBX8 967 aa12.47□□□□□ -0.41
LRTOMT-201ENST00000289488 NCBP3Q53F19 620 aaKnown RBP12.46□□□□□ -0.41
LRTOMT-201ENST00000289488 RTF1Q92541 710 aaKnown RBP12.46□□□□□ -0.41
LRTOMT-201ENST00000289488 KAT6BQ8WYB5 2073 aa12.46□□□□□ -0.41
LRTOMT-201ENST00000289488 CARD10Q9BWT7 1032 aa12.46□□□□□ -0.41
LRTOMT-201ENST00000289488 MAP3K5Q99683 1374 aa12.46□□□□□ -0.42
LRTOMT-201ENST00000289488 CRB1P82279 1406 aa12.46□□□□□ -0.42
LRTOMT-201ENST00000289488 TATP17735 454 aaPredicted RBP12.45□□□□□ -0.42
LRTOMT-201ENST00000289488 PLEKHO1Q53GL0 409 aaPredicted RBP12.45□□□□□ -0.42
LRTOMT-201ENST00000289488 NGLY1Q96IV0 654 aa12.45□□□□□ -0.42
LRTOMT-201ENST00000289488 RCAN3Q9UKA8 241 aa12.45□□□□□ -0.42
LRTOMT-201ENST00000289488 LMOD3Q0VAK6 560 aa12.45□□□□□ -0.42
LRTOMT-201ENST00000289488 MBIPQ9NS73 344 aa12.45□□□□□ -0.42
LRTOMT-201ENST00000289488 EXOSC9Q06265 439 aaKnown RBP12.44□□□□□ -0.42
LRTOMT-201ENST00000289488 MYH16Q9H6N6 1097 aa12.44□□□□□ -0.42
LRTOMT-201ENST00000289488 NRAPQ86VF7 1730 aa12.44□□□□□ -0.42
LRTOMT-201ENST00000289488 ELL2O00472 640 aaPredicted RBP12.44□□□□□ -0.42
LRTOMT-201ENST00000289488 CYP27B1O15528 508 aa12.44□□□□□ -0.42
LRTOMT-201ENST00000289488 KRT24Q2M2I5 525 aa12.44□□□□□ -0.42
LRTOMT-201ENST00000289488 AMOTQ4VCS5 1084 aa12.44□□□□□ -0.42
LRTOMT-201ENST00000289488 NPM2Q86SE8 214 aaKnown RBP12.44□□□□□ -0.42
LRTOMT-201ENST00000289488 PLIN1O60240 522 aa12.43□□□□□ -0.42
LRTOMT-201ENST00000289488 ZNF853P0CG23 659 aa12.43□□□□□ -0.42
LRTOMT-201ENST00000289488 UBE2Q2Q8WVN8 375 aa12.43□□□□□ -0.42
LRTOMT-201ENST00000289488 CFAP44Q96MT7 982 aa12.43□□□□□ -0.42
LRTOMT-201ENST00000289488 SLIT2O94813 1529 aa12.43□□□□□ -0.42
LRTOMT-201ENST00000289488 IL16Q14005 1332 aa12.43□□□□□ -0.42
LRTOMT-201ENST00000289488 MS4A1P11836 297 aa12.43□□□□□ -0.42
LRTOMT-201ENST00000289488 IL2RBP14784 551 aa12.43□□□□□ -0.42
LRTOMT-201ENST00000289488 AKAP4Q5JQC9 854 aa12.43□□□□□ -0.42
LRTOMT-201ENST00000289488 C1orf141Q5JVX7 400 aa12.43□□□□□ -0.42
LRTOMT-201ENST00000289488 BCL2L13Q9BXK5 485 aa12.43□□□□□ -0.42
LRTOMT-201ENST00000289488 CCDC9Q9Y3X0 531 aaKnown RBP12.43□□□□□ -0.42
LRTOMT-201ENST00000289488 OVOS2A0A0G2JMS6 1433 aa12.42□□□□□ -0.42
LRTOMT-201ENST00000289488 SPATA31A6Q5VVP1 1343 aa12.42□□□□□ -0.42
LRTOMT-201ENST00000289488 BCAR3O75815 825 aa12.42□□□□□ -0.42
LRTOMT-201ENST00000289488 PDE4AP27815 886 aa12.42□□□□□ -0.42
LRTOMT-201ENST00000289488 TSPYL6Q8N831 410 aa12.42□□□□□ -0.42
LRTOMT-201ENST00000289488 DDX54Q8TDD1 881 aaKnown RBP12.42□□□□□ -0.42
LRTOMT-201ENST00000289488 IFT57Q9NWB7 429 aa12.42□□□□□ -0.42
LRTOMT-201ENST00000289488 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.42□□□□□ -0.42
LRTOMT-201ENST00000289488 BCL9LQ86UU0 1499 aa12.42□□□□□ -0.42
LRTOMT-201ENST00000289488 BACH2Q9BYV9 841 aa12.42□□□□□ -0.42
LRTOMT-201ENST00000289488 PKD1L3Q7Z443 1732 aa12.42□□□□□ -0.42
LRTOMT-201ENST00000289488 SHANK3Q9BYB0 1731 aa12.41□□□□□ -0.42
LRTOMT-201ENST00000289488 PARP4Q9UKK3 1724 aaKnown RBP12.41□□□□□ -0.42
LRTOMT-201ENST00000289488 PHKG2P15735 406 aa12.41□□□□□ -0.42
LRTOMT-201ENST00000289488 GNAI1P63096 354 aa12.41□□□□□ -0.42
LRTOMT-201ENST00000289488 MEX3CQ5U5Q3 659 aaKnown RBP12.41□□□□□ -0.42
LRTOMT-201ENST00000289488 SPG7Q9UQ90 795 aa12.41□□□□□ -0.42
LRTOMT-201ENST00000289488 NWD2Q9ULI1 1742 aa12.41□□□□□ -0.42
LRTOMT-201ENST00000289488 LRRC37A3O60309 1634 aa12.4□□□□□ -0.42
LRTOMT-201ENST00000289488 CHL1O00533 1208 aa12.4□□□□□ -0.42
LRTOMT-201ENST00000289488 RRP1P56182 461 aaKnown RBP12.4□□□□□ -0.42
LRTOMT-201ENST00000289488 C8orf58Q8NAV2 365 aa12.4□□□□□ -0.42
LRTOMT-201ENST00000289488 ZCRB1Q8TBF4 217 aaKnown RBP12.4□□□□□ -0.42
LRTOMT-201ENST00000289488 CEMIPQ8WUJ3 1361 aa12.4□□□□□ -0.42
LRTOMT-201ENST00000289488 SPATA31A1Q5TZJ5 1347 aa12.4□□□□□ -0.42
LRTOMT-201ENST00000289488 RNMTO43148 476 aaKnown RBP12.4□□□□□ -0.42
LRTOMT-201ENST00000289488 CALD1Q05682 793 aaKnown RBP12.4□□□□□ -0.42
LRTOMT-201ENST00000289488 UNC5CLQ8IV45 518 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms