RNA–Protein interactions for RNA: ENST00000289448.2

HMHB1-201, Transcript of histocompatibility minor HB-1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HMHB1, Length 384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMHB1-201ENST00000289448 LRRC4BQ9NT99 713 aa13.22□□□□□ -0.29
HMHB1-201ENST00000289448 KIF24Q5T7B8 1368 aa13.21□□□□□ -0.29
HMHB1-201ENST00000289448 STK32BQ9NY57 414 aa13.21□□□□□ -0.29
HMHB1-201ENST00000289448 NSD2O96028 1365 aa13.2□□□□□ -0.3
HMHB1-201ENST00000289448 UTRNP46939 3433 aa13.2□□□□□ -0.3
HMHB1-201ENST00000289448 BTAF1O14981 1849 aa13.2□□□□□ -0.3
HMHB1-201ENST00000289448 CGNL1Q0VF96 1302 aa13.2□□□□□ -0.3
HMHB1-201ENST00000289448 PPM1GO15355 546 aaPredicted RBP13.2□□□□□ -0.3
HMHB1-201ENST00000289448 ZBTB7AO95365 584 aa13.2□□□□□ -0.3
HMHB1-201ENST00000289448 POLKQ9UBT6 870 aa13.2□□□□□ -0.3
HMHB1-201ENST00000289448 SMG6Q86US8 1419 aaKnown RBP13.2□□□□□ -0.3
HMHB1-201ENST00000289448 CASZ1Q86V15 1759 aa13.2□□□□□ -0.3
HMHB1-201ENST00000289448 SHANK3Q9BYB0 1731 aa13.19□□□□□ -0.3
HMHB1-201ENST00000289448 ZNF827Q17R98 1081 aa13.19□□□□□ -0.3
HMHB1-201ENST00000289448 RAPGEF4Q8WZA2 1011 aa13.19□□□□□ -0.3
HMHB1-201ENST00000289448 SYTL4Q96C24 671 aaPredicted RBP13.19□□□□□ -0.3
HMHB1-201ENST00000289448 PANK3Q9H999 370 aa13.19□□□□□ -0.3
HMHB1-201ENST00000289448 WASHC2AQ641Q2 1341 aa13.18□□□□□ -0.3
HMHB1-201ENST00000289448 TATP17735 454 aaPredicted RBP13.18□□□□□ -0.3
HMHB1-201ENST00000289448 TNNT2P45379 298 aaPredicted RBP13.18□□□□□ -0.3
HMHB1-201ENST00000289448 KCNQ4P56696 695 aa13.18□□□□□ -0.3
HMHB1-201ENST00000289448 ATF5Q9Y2D1 282 aaPredicted RBP13.18□□□□□ -0.3
HMHB1-201ENST00000289448 PAPPAQ13219 1627 aa13.17□□□□□ -0.3
HMHB1-201ENST00000289448 PTGER2P43116 358 aa13.17□□□□□ -0.3
HMHB1-201ENST00000289448 EYA1Q99502 592 aa13.17□□□□□ -0.3
HMHB1-201ENST00000289448 NCAPD2Q15021 1401 aa13.16□□□□□ -0.3
HMHB1-201ENST00000289448 CYP27B1O15528 508 aa13.16□□□□□ -0.3
HMHB1-201ENST00000289448 AKT1S1Q96B36 256 aa13.16□□□□□ -0.3
HMHB1-201ENST00000289448 PPP1R1BQ9UD71 204 aaPredicted RBP13.16□□□□□ -0.3
HMHB1-201ENST00000289448 SLC27A3Q5K4L6 730 aa13.15□□□□□ -0.3
HMHB1-201ENST00000289448 DOT1LQ8TEK3 1739 aa13.15□□□□□ -0.3
HMHB1-201ENST00000289448 ANKRD26Q9UPS8 1709 aa13.14□□□□□ -0.31
HMHB1-201ENST00000289448 EIF4A2Q14240 407 aaKnown RBP13.14□□□□□ -0.31
HMHB1-201ENST00000289448 SGIP1Q9BQI5 828 aa13.14□□□□□ -0.31
HMHB1-201ENST00000289448 PCDH11XQ9BZA7 1347 aa13.13□□□□□ -0.31
HMHB1-201ENST00000289448 PCDH11YQ9BZA8 1340 aa13.13□□□□□ -0.31
HMHB1-201ENST00000289448 MAP2P11137 1827 aaKnown RBP13.13□□□□□ -0.31
HMHB1-201ENST00000289448 GOLGB1Q14789 3259 aaKnown RBP13.13□□□□□ -0.31
HMHB1-201ENST00000289448 MTFR1LQ9H019 292 aa13.13□□□□□ -0.31
HMHB1-201ENST00000289448 NKX1-1Q15270 411 aaPredicted RBP13.11□□□□□ -0.31
HMHB1-201ENST00000289448 MPRIPQ6WCQ1 1025 aa13.11□□□□□ -0.31
HMHB1-201ENST00000289448 CCNL1Q9UK58 526 aaPredicted RBP13.11□□□□□ -0.31
HMHB1-201ENST00000289448 KIF7Q2M1P5 1343 aa13.11□□□□□ -0.31
HMHB1-201ENST00000289448 PNPLA7Q6ZV29 1317 aa13.11□□□□□ -0.31
HMHB1-201ENST00000289448 TFCP2L1Q9NZI6 479 aa13.1□□□□□ -0.31
HMHB1-201ENST00000289448 LY75O60449 1722 aa13.09□□□□□ -0.31
HMHB1-201ENST00000289448 PKD1L3Q7Z443 1732 aa13.09□□□□□ -0.31
HMHB1-201ENST00000289448 MORC1Q86VD1 984 aa13.09□□□□□ -0.31
HMHB1-201ENST00000289448 PIGBQ92521 554 aa13.09□□□□□ -0.31
HMHB1-201ENST00000289448 FHDC1Q9C0D6 1143 aaPredicted RBP13.09□□□□□ -0.31
HMHB1-201ENST00000289448 SPG7Q9UQ90 795 aa13.09□□□□□ -0.31
HMHB1-201ENST00000289448 TOGARAM1Q9Y4F4 1720 aa13.08□□□□□ -0.32
HMHB1-201ENST00000289448 AMER1Q5JTC6 1135 aaPredicted RBP13.08□□□□□ -0.32
HMHB1-201ENST00000289448 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.08□□□□□ -0.32
HMHB1-201ENST00000289448 KNSTRNQ9Y448 316 aa13.08□□□□□ -0.32
HMHB1-201ENST00000289448 IGSF1Q8N6C5 1336 aa13.08□□□□□ -0.32
HMHB1-201ENST00000289448 PALLDQ8WX93 1383 aa13.07□□□□□ -0.32
HMHB1-201ENST00000289448 PHKG2P15735 406 aa13.07□□□□□ -0.32
HMHB1-201ENST00000289448 ARXQ96QS3 562 aa13.07□□□□□ -0.32
HMHB1-201ENST00000289448 SYT17Q9BSW7 474 aa13.07□□□□□ -0.32
HMHB1-201ENST00000289448 COL23A1Q86Y22 540 aaPredicted RBP13.06□□□□□ -0.32
HMHB1-201ENST00000289448 TUBGCP6Q96RT7 1819 aa13.05□□□□□ -0.32
HMHB1-201ENST00000289448 PER1O15534 1290 aaPredicted RBP13.05□□□□□ -0.32
HMHB1-201ENST00000289448 AMIGO3Q86WK7 504 aa13.05□□□□□ -0.32
HMHB1-201ENST00000289448 AEBP1Q8IUX7 1158 aa13.05□□□□□ -0.32
HMHB1-201ENST00000289448 IFNL2Q8IZJ0 200 aa13.05□□□□□ -0.32
HMHB1-201ENST00000289448 SLC16A10Q8TF71 515 aa13.05□□□□□ -0.32
HMHB1-201ENST00000289448 IL13P35225 146 aa13.04□□□□□ -0.32
HMHB1-201ENST00000289448 ASAP1Q9ULH1 1129 aa13.04□□□□□ -0.32
HMHB1-201ENST00000289448 QSER1Q2KHR3 1735 aa13.04□□□□□ -0.32
HMHB1-201ENST00000289448 ITGB4P16144 1822 aa13.04□□□□□ -0.32
HMHB1-201ENST00000289448 SMIM5Q71RC9 77 aa13.03□□□□□ -0.32
HMHB1-201ENST00000289448 SMARCC1Q92922 1105 aaPredicted RBP13.03□□□□□ -0.32
HMHB1-201ENST00000289448 TMOD3Q9NYL9 352 aa13.03□□□□□ -0.32
HMHB1-201ENST00000289448 LOC102724428A0A0B4J2F2 783 aa13.02□□□□□ -0.33
HMHB1-201ENST00000289448 MSH5O43196 834 aa13.02□□□□□ -0.33
HMHB1-201ENST00000289448 SIK1P57059 783 aa13.02□□□□□ -0.33
HMHB1-201ENST00000289448 ATG3Q9NT62 314 aa13.02□□□□□ -0.33
HMHB1-201ENST00000289448 MAP3K5Q99683 1374 aa13.02□□□□□ -0.33
HMHB1-201ENST00000289448 YY1P25490 414 aa13.01□□□□□ -0.33
HMHB1-201ENST00000289448 MTHFSP49914 203 aa13.01□□□□□ -0.33
HMHB1-201ENST00000289448 ITPK1Q13572 414 aa13.01□□□□□ -0.33
HMHB1-201ENST00000289448 PLEKHO1Q53GL0 409 aaPredicted RBP13.01□□□□□ -0.33
HMHB1-201ENST00000289448 MSL1Q68DK7 614 aa13.01□□□□□ -0.33
HMHB1-201ENST00000289448 SULT6B1Q6IMI4 303 aa13.01□□□□□ -0.33
HMHB1-201ENST00000289448 LINC00116Q8NCU8 138 aa13.01□□□□□ -0.33
HMHB1-201ENST00000289448 PLEKHG2Q9H7P9 1386 aa13.01□□□□□ -0.33
HMHB1-201ENST00000289448 C5P01031 1676 aa13.01□□□□□ -0.33
HMHB1-201ENST00000289448 COL24A1Q17RW2 1714 aa13□□□□□ -0.33
HMHB1-201ENST00000289448 DCAF8L1A6NGE4 600 aa13□□□□□ -0.33
HMHB1-201ENST00000289448 POLD1P28340 1107 aa13□□□□□ -0.33
HMHB1-201ENST00000289448 CC2D1BQ5T0F9 858 aaKnown RBP13□□□□□ -0.33
HMHB1-201ENST00000289448 ZNF530Q6P9A1 599 aaPredicted RBP13□□□□□ -0.33
HMHB1-201ENST00000289448 KDM6AO15550 1401 aaPredicted RBP12.99□□□□□ -0.33
HMHB1-201ENST00000289448 KDRP35968 1356 aa12.99□□□□□ -0.33
HMHB1-201ENST00000289448 ERVV-2B6SEH9 535 aa12.99□□□□□ -0.33
HMHB1-201ENST00000289448 AMOTQ4VCS5 1084 aa12.99□□□□□ -0.33
HMHB1-201ENST00000289448 NLGN2Q8NFZ4 835 aa12.99□□□□□ -0.33
HMHB1-201ENST00000289448 DCAF5Q96JK2 942 aa12.99□□□□□ -0.33
HMHB1-201ENST00000289448 SLC4A9Q96Q91 983 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms