RNA–Protein interactions for RNA: ENST00000288602.10

BRAF-201, Transcript of B-Raf proto-oncogene, serine/threonine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAF, Length 2,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAF-201ENST00000288602 RTF1Q92541 710 aaKnown RBP24.43■■□□□ 1.5
BRAF-201ENST00000288602 CRB1P82279 1406 aa24.42■■□□□ 1.5
BRAF-201ENST00000288602 SLC4A3P48751 1232 aa24.42■■□□□ 1.5
BRAF-201ENST00000288602 ABCC4O15439 1325 aa24.4■■□□□ 1.5
BRAF-201ENST00000288602 TSPYL4Q9UJ04 414 aa24.38■■□□□ 1.49
BRAF-201ENST00000288602 SMC5Q8IY18 1101 aa24.38■■□□□ 1.49
BRAF-201ENST00000288602 GAS2L2Q8NHY3 880 aa24.38■■□□□ 1.49
BRAF-201ENST00000288602 VIRMAQ69YN4 1812 aaKnown RBP24.37■■□□□ 1.49
BRAF-201ENST00000288602 LMOD2Q6P5Q4 547 aa24.37■■□□□ 1.49
BRAF-201ENST00000288602 DDRGK1Q96HY6 314 aa24.37■■□□□ 1.49
BRAF-201ENST00000288602 API5Q9BZZ5 524 aaKnown RBP24.36■■□□□ 1.49
BRAF-201ENST00000288602 USP19O94966 1318 aa24.36■■□□□ 1.49
BRAF-201ENST00000288602 NWD1Q149M9 1564 aa24.36■■□□□ 1.49
BRAF-201ENST00000288602 PROSER2Q86WR7 435 aaPredicted RBP24.36■■□□□ 1.49
BRAF-201ENST00000288602 LTN1O94822 1766 aa24.35■■□□□ 1.49
BRAF-201ENST00000288602 USP54Q70EL1 1684 aa24.34■■□□□ 1.49
BRAF-201ENST00000288602 LNPKQ9C0E8 428 aa24.34■■□□□ 1.49
BRAF-201ENST00000288602 DNAJC5Q9H3Z4 198 aa24.34■■□□□ 1.49
BRAF-201ENST00000288602 KIF24Q5T7B8 1368 aa24.33■■□□□ 1.49
BRAF-201ENST00000288602 KIAA0232Q92628 1395 aa24.33■■□□□ 1.49
BRAF-201ENST00000288602 GNAT3A8MTJ3 354 aa24.33■■□□□ 1.49
BRAF-201ENST00000288602 SLC4A2P04920 1241 aa24.33■■□□□ 1.48
BRAF-201ENST00000288602 SIRT2Q8IXJ6 389 aa24.33■■□□□ 1.48
BRAF-201ENST00000288602 NBPF6Q5VWK0 638 aa24.32■■□□□ 1.48
BRAF-201ENST00000288602 IP6K1Q92551 441 aa24.32■■□□□ 1.48
BRAF-201ENST00000288602 NBPF4Q96M43 638 aa24.32■■□□□ 1.48
BRAF-201ENST00000288602 IL17REQ8NFR9 667 aa24.3■■□□□ 1.48
BRAF-201ENST00000288602 NUCB1Q02818 461 aa24.3■■□□□ 1.48
BRAF-201ENST00000288602 LRRC59Q96AG4 307 aaKnown RBP24.3■■□□□ 1.48
BRAF-201ENST00000288602 NFAT5O94916 1531 aa24.3■■□□□ 1.48
BRAF-201ENST00000288602 RGS12O14924 1447 aa24.29■■□□□ 1.48
BRAF-201ENST00000288602 HAP1P54257 671 aaPredicted RBP24.28■■□□□ 1.48
BRAF-201ENST00000288602 G2E3Q7L622 706 aa24.28■■□□□ 1.48
BRAF-201ENST00000288602 NECTIN2Q92692 538 aa24.28■■□□□ 1.48
BRAF-201ENST00000288602 CHMP4BQ9H444 224 aaKnown RBP24.28■■□□□ 1.48
BRAF-201ENST00000288602 ANKRD45Q5TZF3 282 aa24.28■■□□□ 1.48
BRAF-201ENST00000288602 RTL1A6NKG5 1358 aa24.28■■□□□ 1.48
BRAF-201ENST00000288602 CHD1LQ86WJ1 897 aa24.27■■□□□ 1.48
BRAF-201ENST00000288602 GCP02774 474 aa24.27■■□□□ 1.48
BRAF-201ENST00000288602 KCNH5Q8NCM2 988 aa24.27■■□□□ 1.48
BRAF-201ENST00000288602 DAXXQ9UER7 740 aaPredicted RBP24.26■■□□□ 1.47
BRAF-201ENST00000288602 MSH6P52701 1360 aa24.26■■□□□ 1.47
BRAF-201ENST00000288602 MAP3K5Q99683 1374 aa24.26■■□□□ 1.47
BRAF-201ENST00000288602 INTS3Q68E01 1043 aaKnown RBP24.26■■□□□ 1.47
BRAF-201ENST00000288602 F6X3S4 739 aa24.25■■□□□ 1.47
BRAF-201ENST00000288602 HTATSF1O43719 755 aaKnown RBP24.25■■□□□ 1.47
BRAF-201ENST00000288602 KRT28Q7Z3Y7 464 aa24.24■■□□□ 1.47
BRAF-201ENST00000288602 DDX17Q92841 729 aaKnown RBP24.24■■□□□ 1.47
BRAF-201ENST00000288602 RGPD2P0DJD1 1756 aa24.24■■□□□ 1.47
BRAF-201ENST00000288602 SLC4A10Q6U841 1118 aa24.23■■□□□ 1.47
BRAF-201ENST00000288602 PTPRCP08575 1304 aa24.23■■□□□ 1.47
BRAF-201ENST00000288602 C19orf44Q9H6X5 657 aa24.22■■□□□ 1.47
BRAF-201ENST00000288602 GCC1Q96CN9 775 aa24.22■■□□□ 1.47
BRAF-201ENST00000288602 ARHGEF25Q86VW2 580 aa24.21■■□□□ 1.47
BRAF-201ENST00000288602 MEIS3Q99687 375 aa24.21■■□□□ 1.47
BRAF-201ENST00000288602 LGR6Q9HBX8 967 aa24.21■■□□□ 1.47
BRAF-201ENST00000288602 TAF7Q15545 349 aaPredicted RBP24.2■■□□□ 1.46
BRAF-201ENST00000288602 LRRC37A3O60309 1634 aa24.2■■□□□ 1.46
BRAF-201ENST00000288602 C1orf167Q5SNV9 1468 aa24.2■■□□□ 1.46
BRAF-201ENST00000288602 HSPA2P54652 639 aa24.2■■□□□ 1.46
BRAF-201ENST00000288602 AXIN2Q9Y2T1 843 aa24.2■■□□□ 1.46
BRAF-201ENST00000288602 UPF2Q9HAU5 1272 aaKnown RBP24.19■■□□□ 1.46
BRAF-201ENST00000288602 MFAP1P55081 439 aaKnown RBP24.18■■□□□ 1.46
BRAF-201ENST00000288602 STK31Q9BXU1 1019 aa24.18■■□□□ 1.46
BRAF-201ENST00000288602 TMEM94Q12767 1356 aa24.17■■□□□ 1.46
BRAF-201ENST00000288602 ZC3H6P61129 1189 aaKnown RBP24.17■■□□□ 1.46
BRAF-201ENST00000288602 TBC1D32Q96NH3 1257 aa24.17■■□□□ 1.46
BRAF-201ENST00000288602 ANKRD24Q8TF21 1146 aa24.16■■□□□ 1.46
BRAF-201ENST00000288602 ATF3P18847 181 aa24.15■■□□□ 1.46
BRAF-201ENST00000288602 MPRIPQ6WCQ1 1025 aa24.15■■□□□ 1.46
BRAF-201ENST00000288602 CCDC30Q5VVM6 783 aa24.14■■□□□ 1.45
BRAF-201ENST00000288602 CEP85Q6P2H3 762 aa24.14■■□□□ 1.45
BRAF-201ENST00000288602 ATP10DQ9P241 1426 aa24.14■■□□□ 1.45
BRAF-201ENST00000288602 FLIIQ13045 1269 aa24.13■■□□□ 1.45
BRAF-201ENST00000288602 FKBP5Q13451 457 aaPredicted RBP24.13■■□□□ 1.45
BRAF-201ENST00000288602 ZNF530Q6P9A1 599 aaPredicted RBP24.13■■□□□ 1.45
BRAF-201ENST00000288602 TRPM3Q9HCF6 1732 aaPredicted RBP24.13■■□□□ 1.45
BRAF-201ENST00000288602 ANKRD44Q8N8A2 993 aa24.13■■□□□ 1.45
BRAF-201ENST00000288602 SLIT3O75094 1523 aa24.13■■□□□ 1.45
BRAF-201ENST00000288602 STRCP1A6NGW2 1772 aa24.13■■□□□ 1.45
BRAF-201ENST00000288602 APBB1O00213 710 aa24.12■■□□□ 1.45
BRAF-201ENST00000288602 KCNQ3O43525 872 aa24.12■■□□□ 1.45
BRAF-201ENST00000288602 DCTPP1Q9H773 170 aa24.12■■□□□ 1.45
BRAF-201ENST00000288602 CEMIPQ8WUJ3 1361 aa24.11■■□□□ 1.45
BRAF-201ENST00000288602 C16orf71Q8IYS4 520 aaPredicted RBP24.1■■□□□ 1.45
BRAF-201ENST00000288602 EIF2S2P20042 333 aaKnown RBP24.1■■□□□ 1.45
BRAF-201ENST00000288602 RTL5Q5HYW3 569 aaPredicted RBP24.1■■□□□ 1.45
BRAF-201ENST00000288602 PHRF1Q9P1Y6 1649 aaKnown RBP24.09■■□□□ 1.45
BRAF-201ENST00000288602 CABLES1Q8TDN4 633 aa24.09■■□□□ 1.45
BRAF-201ENST00000288602 C22orf23Q9BZE7 217 aa24.09■■□□□ 1.45
BRAF-201ENST00000288602 PLEKHO1Q53GL0 409 aaPredicted RBP24.09■■□□□ 1.45
BRAF-201ENST00000288602 HDGFL1Q5TGJ6 251 aa24.09■■□□□ 1.45
BRAF-201ENST00000288602 RPAP2Q8IXW5 612 aaPredicted RBP24.09■■□□□ 1.45
BRAF-201ENST00000288602 MST1RQ04912 1400 aa24.09■■□□□ 1.45
BRAF-201ENST00000288602 PHAXQ9H814 394 aaKnown RBP24.08■■□□□ 1.45
BRAF-201ENST00000288602 RGPD5Q99666 1765 aa24.08■■□□□ 1.45
BRAF-201ENST00000288602 CCT4P50991 539 aaKnown RBP24.08■■□□□ 1.45
BRAF-201ENST00000288602 BMP2KLQ5H9B9 411 aa24.08■■□□□ 1.45
BRAF-201ENST00000288602 AKAP4Q5JQC9 854 aa24.08■■□□□ 1.45
BRAF-201ENST00000288602 PXDNQ92626 1479 aa24.08■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms