RNA–Protein interactions for RNA: ENST00000285398.6

ERCC3-201, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERCC3, Length 2,750 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-201ENST00000285398 LTBP4Q8N2S1 1624 aa13.14□□□□□ -0.31
ERCC3-201ENST00000285398 AMPHP49418 695 aa13.14□□□□□ -0.31
ERCC3-201ENST00000285398 ANKRD26Q9UPS8 1709 aa13.14□□□□□ -0.31
ERCC3-201ENST00000285398 CALD1Q05682 793 aaKnown RBP13.13□□□□□ -0.31
ERCC3-201ENST00000285398 C22orf23Q9BZE7 217 aa13.13□□□□□ -0.31
ERCC3-201ENST00000285398 PDZRN3Q9UPQ7 1066 aa13.13□□□□□ -0.31
ERCC3-201ENST00000285398 WWC1Q8IX03 1113 aa13.13□□□□□ -0.31
ERCC3-201ENST00000285398 PCDHB15Q9Y5E8 787 aa13.13□□□□□ -0.31
ERCC3-201ENST00000285398 NPHP3Q7Z494 1330 aa13.13□□□□□ -0.31
ERCC3-201ENST00000285398 GCP02774 474 aa13.12□□□□□ -0.31
ERCC3-201ENST00000285398 PTMSP20962 102 aa13.12□□□□□ -0.31
ERCC3-201ENST00000285398 SKOR2Q2VWA4 1001 aaPredicted RBP13.12□□□□□ -0.31
ERCC3-201ENST00000285398 AEBP1Q8IUX7 1158 aa13.12□□□□□ -0.31
ERCC3-201ENST00000285398 HSCBQ8IWL3 235 aa13.12□□□□□ -0.31
ERCC3-201ENST00000285398 RWDD1Q9H446 243 aaPredicted RBP13.12□□□□□ -0.31
ERCC3-201ENST00000285398 AATKQ6ZMQ8 1374 aa13.11□□□□□ -0.31
ERCC3-201ENST00000285398 USP31Q70CQ4 1352 aa13.11□□□□□ -0.31
ERCC3-201ENST00000285398 PNPLA6Q8IY17 1366 aa13.11□□□□□ -0.31
ERCC3-201ENST00000285398 EIF4A2Q14240 407 aaKnown RBP13.11□□□□□ -0.31
ERCC3-201ENST00000285398 KIAA1211Q6ZU35 1233 aa13.11□□□□□ -0.31
ERCC3-201ENST00000285398 BCL11BQ9C0K0 894 aaPredicted RBP13.11□□□□□ -0.31
ERCC3-201ENST00000285398 COL3A1P02461 1466 aaPredicted RBP13.11□□□□□ -0.31
ERCC3-201ENST00000285398 IL13P35225 146 aa13.11□□□□□ -0.31
ERCC3-201ENST00000285398 RARSP54136 660 aaKnown RBP13.11□□□□□ -0.31
ERCC3-201ENST00000285398 SHPRHQ149N8 1683 aa13.1□□□□□ -0.31
ERCC3-201ENST00000285398 TERF1P54274 439 aa13.1□□□□□ -0.31
ERCC3-201ENST00000285398 GBP4Q96PP9 640 aa13.1□□□□□ -0.31
ERCC3-201ENST00000285398 CCDC173Q0VFZ6 552 aa13.09□□□□□ -0.31
ERCC3-201ENST00000285398 TCP11L2Q8N4U5 519 aa13.09□□□□□ -0.31
ERCC3-201ENST00000285398 IQSEC2Q5JU85 1478 aa13.09□□□□□ -0.31
ERCC3-201ENST00000285398 RLBP1P12271 317 aa13.09□□□□□ -0.31
ERCC3-201ENST00000285398 PRKAR2BP31323 418 aa13.09□□□□□ -0.31
ERCC3-201ENST00000285398 CHRNA2Q15822 529 aa13.09□□□□□ -0.31
ERCC3-201ENST00000285398 USHBP1Q8N6Y0 703 aa13.09□□□□□ -0.31
ERCC3-201ENST00000285398 ANP32BQ92688 251 aaKnown RBP13.09□□□□□ -0.31
ERCC3-201ENST00000285398 MAP7D2Q96T17 732 aa13.09□□□□□ -0.31
ERCC3-201ENST00000285398 HOXC9P31274 260 aa13.09□□□□□ -0.31
ERCC3-201ENST00000285398 PHACTR3Q96KR7 559 aa13.09□□□□□ -0.31
ERCC3-201ENST00000285398 SULT6B1Q6IMI4 303 aa13.08□□□□□ -0.32
ERCC3-201ENST00000285398 CIZ1Q9ULV3 898 aaPredicted RBP13.08□□□□□ -0.32
ERCC3-201ENST00000285398 AXIN2Q9Y2T1 843 aa13.08□□□□□ -0.32
ERCC3-201ENST00000285398 KIF1AQ12756 1690 aa13.08□□□□□ -0.32
ERCC3-201ENST00000285398 PEAK1Q9H792 1746 aa13.08□□□□□ -0.32
ERCC3-201ENST00000285398 MFAP1P55081 439 aaKnown RBP13.08□□□□□ -0.32
ERCC3-201ENST00000285398 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.08□□□□□ -0.32
ERCC3-201ENST00000285398 ZSCAN30Q86W11 494 aa13.08□□□□□ -0.32
ERCC3-201ENST00000285398 SPATA31A3Q5VYP0 1347 aa13.07□□□□□ -0.32
ERCC3-201ENST00000285398 OFD1O75665 1012 aa13.07□□□□□ -0.32
ERCC3-201ENST00000285398 MARF1Q9Y4F3 1742 aaKnown RBP13.07□□□□□ -0.32
ERCC3-201ENST00000285398 PHF23Q9BUL5 403 aaPredicted RBP13.07□□□□□ -0.32
ERCC3-201ENST00000285398 PXDNQ92626 1479 aa13.07□□□□□ -0.32
ERCC3-201ENST00000285398 CDK12Q9NYV4 1490 aaPredicted RBP13.06□□□□□ -0.32
ERCC3-201ENST00000285398 MSNP26038 577 aaKnown RBP13.06□□□□□ -0.32
ERCC3-201ENST00000285398 DDIT3P35638 169 aa13.06□□□□□ -0.32
ERCC3-201ENST00000285398 GAS2L3Q86XJ1 694 aa13.06□□□□□ -0.32
ERCC3-201ENST00000285398 LRRC59Q96AG4 307 aaKnown RBP13.06□□□□□ -0.32
ERCC3-201ENST00000285398 RUNDC1Q96C34 613 aa13.06□□□□□ -0.32
ERCC3-201ENST00000285398 PPP1R9BQ96SB3 815 aa13.06□□□□□ -0.32
ERCC3-201ENST00000285398 TRPM3Q9HCF6 1732 aaPredicted RBP13.06□□□□□ -0.32
ERCC3-201ENST00000285398 UBAP1LF5GYI3 381 aa13.06□□□□□ -0.32
ERCC3-201ENST00000285398 PLEKHF1Q96S99 279 aa13.06□□□□□ -0.32
ERCC3-201ENST00000285398 TNNQ9UQP3 1299 aa13.06□□□□□ -0.32
ERCC3-201ENST00000285398 FLT4P35916 1363 aa13.05□□□□□ -0.32
ERCC3-201ENST00000285398 FGD1P98174 961 aa13.05□□□□□ -0.32
ERCC3-201ENST00000285398 EYA1Q99502 592 aa13.05□□□□□ -0.32
ERCC3-201ENST00000285398 SOS2Q07890 1332 aaPredicted RBP13.05□□□□□ -0.32
ERCC3-201ENST00000285398 SBNO1A3KN83 1393 aa13.05□□□□□ -0.32
ERCC3-201ENST00000285398 HAP1P54257 671 aaPredicted RBP13.05□□□□□ -0.32
ERCC3-201ENST00000285398 TNPO1Q92973 898 aaKnown RBP13.05□□□□□ -0.32
ERCC3-201ENST00000285398 TNS3Q68CZ2 1445 aa13.05□□□□□ -0.32
ERCC3-201ENST00000285398 ARHGEF25Q86VW2 580 aa13.04□□□□□ -0.32
ERCC3-201ENST00000285398 WDR63Q8IWG1 891 aa13.04□□□□□ -0.32
ERCC3-201ENST00000285398 KCNH5Q8NCM2 988 aa13.04□□□□□ -0.32
ERCC3-201ENST00000285398 SNX21Q969T3 373 aa13.04□□□□□ -0.32
ERCC3-201ENST00000285398 SMC5Q8IY18 1101 aa13.04□□□□□ -0.32
ERCC3-201ENST00000285398 NASPP49321 788 aaPredicted RBP13.03□□□□□ -0.32
ERCC3-201ENST00000285398 THUMPD2Q9BTF0 503 aaKnown RBP13.03□□□□□ -0.32
ERCC3-201ENST00000285398 MED1Q15648 1581 aaPredicted RBP13.03□□□□□ -0.32
ERCC3-201ENST00000285398 MVPQ14764 893 aaKnown RBP13.03□□□□□ -0.32
ERCC3-201ENST00000285398 NFAT5O94916 1531 aa13.03□□□□□ -0.32
ERCC3-201ENST00000285398 RAB3GAP1Q15042 981 aa13.03□□□□□ -0.32
ERCC3-201ENST00000285398 PRDM4Q9UKN5 801 aa13.03□□□□□ -0.32
ERCC3-201ENST00000285398 NBPF6Q5VWK0 638 aa13.02□□□□□ -0.32
ERCC3-201ENST00000285398 IP6K1Q92551 441 aa13.02□□□□□ -0.32
ERCC3-201ENST00000285398 NBPF4Q96M43 638 aa13.02□□□□□ -0.32
ERCC3-201ENST00000285398 KIAA0232Q92628 1395 aa13.02□□□□□ -0.33
ERCC3-201ENST00000285398 GOLGA6L22H0YM25 854 aa13.02□□□□□ -0.33
ERCC3-201ENST00000285398 FCHSD2O94868 740 aa13.02□□□□□ -0.33
ERCC3-201ENST00000285398 TMPOP42166 694 aaKnown RBP13.02□□□□□ -0.33
ERCC3-201ENST00000285398 CCDC27Q2M243 656 aa13.02□□□□□ -0.33
ERCC3-201ENST00000285398 MTERF4Q7Z6M4 381 aaKnown RBP13.02□□□□□ -0.33
ERCC3-201ENST00000285398 FAM83GA6ND36 823 aa13.01□□□□□ -0.33
ERCC3-201ENST00000285398 RBM25P49756 843 aaKnown RBP13.01□□□□□ -0.33
ERCC3-201ENST00000285398 RIPK4P57078 832 aa13.01□□□□□ -0.33
ERCC3-201ENST00000285398 DCTN1Q14203 1278 aa13.01□□□□□ -0.33
ERCC3-201ENST00000285398 BCL2L13Q9BXK5 485 aa13.01□□□□□ -0.33
ERCC3-201ENST00000285398 IBTKQ9P2D0 1353 aaPredicted RBP13.01□□□□□ -0.33
ERCC3-201ENST00000285398 ALS2Q96Q42 1657 aa13.01□□□□□ -0.33
ERCC3-201ENST00000285398 HSP90AB1P08238 724 aaKnown RBP13.01□□□□□ -0.33
ERCC3-201ENST00000285398 HS1BP3Q53T59 392 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms