RNA–Protein interactions for RNA: ENST00000284770.9

PDLIM3-202, Transcript of PDZ and LIM domain 3, humanhuman

TSL 1 (best) BASIC

Gene PDLIM3, Length 1,766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-202ENST00000284770 LMOD3Q0VAK6 560 aa24.78■■□□□ 1.56
PDLIM3-202ENST00000284770 WDR63Q8IWG1 891 aa24.78■■□□□ 1.56
PDLIM3-202ENST00000284770 MEX3CQ5U5Q3 659 aaKnown RBP24.77■■□□□ 1.56
PDLIM3-202ENST00000284770 UNC5CLQ8IV45 518 aa24.77■■□□□ 1.56
PDLIM3-202ENST00000284770 MEGF6O75095 1541 aa24.77■■□□□ 1.56
PDLIM3-202ENST00000284770 CDCA7LQ96GN5 454 aa24.76■■□□□ 1.55
PDLIM3-202ENST00000284770 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.76■■□□□ 1.55
PDLIM3-202ENST00000284770 USP35Q9P2H5 1018 aa24.76■■□□□ 1.55
PDLIM3-202ENST00000284770 BCL9LQ86UU0 1499 aa24.76■■□□□ 1.55
PDLIM3-202ENST00000284770 IL2RBP14784 551 aa24.75■■□□□ 1.55
PDLIM3-202ENST00000284770 DLG5Q8TDM6 1919 aa24.74■■□□□ 1.55
PDLIM3-202ENST00000284770 GNAT3A8MTJ3 354 aa24.73■■□□□ 1.55
PDLIM3-202ENST00000284770 HTATSF1O43719 755 aaKnown RBP24.73■■□□□ 1.55
PDLIM3-202ENST00000284770 SPG7Q9UQ90 795 aa24.73■■□□□ 1.55
PDLIM3-202ENST00000284770 OVOS2A0A0G2JMS6 1433 aa24.73■■□□□ 1.55
PDLIM3-202ENST00000284770 SPATA31A1Q5TZJ5 1347 aa24.72■■□□□ 1.55
PDLIM3-202ENST00000284770 SLFN5Q08AF3 891 aa24.72■■□□□ 1.55
PDLIM3-202ENST00000284770 ZNF530Q6P9A1 599 aaPredicted RBP24.72■■□□□ 1.55
PDLIM3-202ENST00000284770 RTF1Q92541 710 aaKnown RBP24.72■■□□□ 1.55
PDLIM3-202ENST00000284770 SPINK5Q9NQ38 1064 aaPredicted RBP24.72■■□□□ 1.55
PDLIM3-202ENST00000284770 USP21Q9UK80 565 aa24.72■■□□□ 1.55
PDLIM3-202ENST00000284770 MAP3K5Q99683 1374 aa24.71■■□□□ 1.55
PDLIM3-202ENST00000284770 SPATA31A5Q5VU36 1347 aa24.71■■□□□ 1.55
PDLIM3-202ENST00000284770 SPATA31A7Q8IWB4 1347 aa24.71■■□□□ 1.55
PDLIM3-202ENST00000284770 E9PSI1 815 aa24.71■■□□□ 1.55
PDLIM3-202ENST00000284770 THRAP3Q9Y2W1 955 aaKnown RBP24.71■■□□□ 1.55
PDLIM3-202ENST00000284770 IL16Q14005 1332 aa24.7■■□□□ 1.55
PDLIM3-202ENST00000284770 CALD1Q05682 793 aaKnown RBP24.7■■□□□ 1.55
PDLIM3-202ENST00000284770 VPS72Q15906 364 aa24.7■■□□□ 1.55
PDLIM3-202ENST00000284770 AKAP4Q5JQC9 854 aa24.7■■□□□ 1.55
PDLIM3-202ENST00000284770 DCTN1Q14203 1278 aa24.7■■□□□ 1.54
PDLIM3-202ENST00000284770 TRMT2AQ8IZ69 625 aaKnown RBP24.7■■□□□ 1.54
PDLIM3-202ENST00000284770 THUMPD2Q9BTF0 503 aaKnown RBP24.7■■□□□ 1.54
PDLIM3-202ENST00000284770 PARP4Q9UKK3 1724 aaKnown RBP24.69■■□□□ 1.54
PDLIM3-202ENST00000284770 C1orf141Q5JVX7 400 aa24.69■■□□□ 1.54
PDLIM3-202ENST00000284770 MCM10Q7L590 875 aa24.69■■□□□ 1.54
PDLIM3-202ENST00000284770 AFF2P51816 1311 aa24.68■■□□□ 1.54
PDLIM3-202ENST00000284770 ZCRB1Q8TBF4 217 aaKnown RBP24.67■■□□□ 1.54
PDLIM3-202ENST00000284770 CCDC9Q9Y3X0 531 aaKnown RBP24.67■■□□□ 1.54
PDLIM3-202ENST00000284770 DISP2A7MBM2 1401 aa24.67■■□□□ 1.54
PDLIM3-202ENST00000284770 PKD1L3Q7Z443 1732 aa24.67■■□□□ 1.54
PDLIM3-202ENST00000284770 DUSP27Q5VZP5 1158 aa24.67■■□□□ 1.54
PDLIM3-202ENST00000284770 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.66■■□□□ 1.54
PDLIM3-202ENST00000284770 CDCA7Q9BWT1 371 aaPredicted RBP24.66■■□□□ 1.54
PDLIM3-202ENST00000284770 IFNL2Q8IZJ0 200 aa24.65■■□□□ 1.54
PDLIM3-202ENST00000284770 IL17REQ8NFR9 667 aa24.65■■□□□ 1.54
PDLIM3-202ENST00000284770 PHKG2P15735 406 aa24.65■■□□□ 1.54
PDLIM3-202ENST00000284770 BARGINQ6ZT62 677 aa24.65■■□□□ 1.54
PDLIM3-202ENST00000284770 MYH16Q9H6N6 1097 aa24.65■■□□□ 1.54
PDLIM3-202ENST00000284770 CYP27B1O15528 508 aa24.64■■□□□ 1.53
PDLIM3-202ENST00000284770 PCDH11XQ9BZA7 1347 aa24.63■■□□□ 1.53
PDLIM3-202ENST00000284770 PCDH11YQ9BZA8 1340 aa24.63■■□□□ 1.53
PDLIM3-202ENST00000284770 IFT57Q9NWB7 429 aa24.63■■□□□ 1.53
PDLIM3-202ENST00000284770 CEMIPQ8WUJ3 1361 aa24.62■■□□□ 1.53
PDLIM3-202ENST00000284770 ZNF853P0CG23 659 aa24.62■■□□□ 1.53
PDLIM3-202ENST00000284770 GNAI1P63096 354 aa24.62■■□□□ 1.53
PDLIM3-202ENST00000284770 MPRIPQ6WCQ1 1025 aa24.62■■□□□ 1.53
PDLIM3-202ENST00000284770 CFAP44Q96MT7 982 aa24.62■■□□□ 1.53
PDLIM3-202ENST00000284770 GTF3C3Q9Y5Q9 886 aa24.62■■□□□ 1.53
PDLIM3-202ENST00000284770 LGR6Q9HBX8 967 aa24.61■■□□□ 1.53
PDLIM3-202ENST00000284770 RNMTO43148 476 aaKnown RBP24.59■■□□□ 1.53
PDLIM3-202ENST00000284770 HSP90AB1P08238 724 aaKnown RBP24.59■■□□□ 1.53
PDLIM3-202ENST00000284770 LAS1LQ9Y4W2 734 aaKnown RBP24.59■■□□□ 1.53
PDLIM3-202ENST00000284770 WNK3Q9BYP7 1800 aa24.59■■□□□ 1.53
PDLIM3-202ENST00000284770 EXOC5O00471 708 aa24.59■■□□□ 1.53
PDLIM3-202ENST00000284770 TRPC5Q9UL62 973 aaPredicted RBP24.59■■□□□ 1.53
PDLIM3-202ENST00000284770 TSR2Q969E8 191 aaKnown RBP24.58■■□□□ 1.53
PDLIM3-202ENST00000284770 DCAF5Q96JK2 942 aa24.58■■□□□ 1.53
PDLIM3-202ENST00000284770 FANCIQ9NVI1 1328 aa24.58■■□□□ 1.53
PDLIM3-202ENST00000284770 LRRC37A3O60309 1634 aa24.58■■□□□ 1.53
PDLIM3-202ENST00000284770 ATRNO75882 1429 aa24.58■■□□□ 1.52
PDLIM3-202ENST00000284770 DDX54Q8TDD1 881 aaKnown RBP24.57■■□□□ 1.52
PDLIM3-202ENST00000284770 CHL1O00533 1208 aa24.57■■□□□ 1.52
PDLIM3-202ENST00000284770 GJD4Q96KN9 370 aaPredicted RBP24.57■■□□□ 1.52
PDLIM3-202ENST00000284770 SHANK3Q9BYB0 1731 aa24.56■■□□□ 1.52
PDLIM3-202ENST00000284770 NKX1-1Q15270 411 aaPredicted RBP24.56■■□□□ 1.52
PDLIM3-202ENST00000284770 FAM98CQ17RN3 349 aaKnown RBP24.56■■□□□ 1.52
PDLIM3-202ENST00000284770 MBIPQ9NS73 344 aa24.56■■□□□ 1.52
PDLIM3-202ENST00000284770 ADAMTS7Q9UKP4 1686 aa24.56■■□□□ 1.52
PDLIM3-202ENST00000284770 TAF7Q15545 349 aaPredicted RBP24.55■■□□□ 1.52
PDLIM3-202ENST00000284770 DDB1Q16531 1140 aa24.55■■□□□ 1.52
PDLIM3-202ENST00000284770 KDM6AO15550 1401 aaPredicted RBP24.55■■□□□ 1.52
PDLIM3-202ENST00000284770 TEFQ10587 303 aa24.54■■□□□ 1.52
PDLIM3-202ENST00000284770 TNS2Q63HR2 1409 aa24.54■■□□□ 1.52
PDLIM3-202ENST00000284770 QTRT2Q9H974 415 aaKnown RBP24.54■■□□□ 1.52
PDLIM3-202ENST00000284770 SUPT16HQ9Y5B9 1047 aaKnown RBP24.54■■□□□ 1.52
PDLIM3-202ENST00000284770 BABAM1Q9NWV8 329 aa24.54■■□□□ 1.52
PDLIM3-202ENST00000284770 ZNF772Q68DY9 489 aaPredicted RBP24.52■■□□□ 1.52
PDLIM3-202ENST00000284770 GLI3P10071 1580 aa24.52■■□□□ 1.52
PDLIM3-202ENST00000284770 MIS18AQ9NYP9 233 aa24.51■■□□□ 1.51
PDLIM3-202ENST00000284770 TSPYL4Q9UJ04 414 aa24.51■■□□□ 1.51
PDLIM3-202ENST00000284770 SCN11AQ9UI33 1791 aa24.5■■□□□ 1.51
PDLIM3-202ENST00000284770 EXOSC9Q06265 439 aaKnown RBP24.5■■□□□ 1.51
PDLIM3-202ENST00000284770 SLC52A2Q9HAB3 445 aa24.49■■□□□ 1.51
PDLIM3-202ENST00000284770 VIRMAQ69YN4 1812 aaKnown RBP24.49■■□□□ 1.51
PDLIM3-202ENST00000284770 ONECUT3O60422 494 aaPredicted RBP24.49■■□□□ 1.51
PDLIM3-202ENST00000284770 RCAN3Q9UKA8 241 aa24.48■■□□□ 1.51
PDLIM3-202ENST00000284770 ERVV-2B6SEH9 535 aa24.47■■□□□ 1.51
PDLIM3-202ENST00000284770 BTBD11A6QL63 1104 aa24.47■■□□□ 1.51
PDLIM3-202ENST00000284770 CT47B1P0C2W7 299 aaPredicted RBP24.47■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms