RNA–Protein interactions for RNA: ENST00000281834.3

TNFSF4-201, Transcript of TNF superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF4, Length 3,470 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4-201ENST00000281834 NBPF4Q96M43 638 aa7.58□□□□□ -1.2
TNFSF4-201ENST00000281834 NCBP3Q53F19 620 aaKnown RBP7.57□□□□□ -1.2
TNFSF4-201ENST00000281834 SIRT2Q8IXJ6 389 aa7.57□□□□□ -1.2
TNFSF4-201ENST00000281834 FOXD4L1Q9NU39 408 aa7.57□□□□□ -1.2
TNFSF4-201ENST00000281834 SBNO1A3KN83 1393 aa7.57□□□□□ -1.2
TNFSF4-201ENST00000281834 AAMPQ13685 434 aa7.57□□□□□ -1.2
TNFSF4-201ENST00000281834 LGR6Q9HBX8 967 aa7.57□□□□□ -1.2
TNFSF4-201ENST00000281834 CSB-PGBD3P0DP91 1061 aa7.57□□□□□ -1.2
TNFSF4-201ENST00000281834 TSHZ3Q63HK5 1081 aa7.57□□□□□ -1.2
TNFSF4-201ENST00000281834 SMC5Q8IY18 1101 aa7.57□□□□□ -1.2
TNFSF4-201ENST00000281834 OTUD7AQ8TE49 926 aaPredicted RBP7.57□□□□□ -1.2
TNFSF4-201ENST00000281834 USP19O94966 1318 aa7.56□□□□□ -1.2
TNFSF4-201ENST00000281834 ZNF530Q6P9A1 599 aaPredicted RBP7.56□□□□□ -1.2
TNFSF4-201ENST00000281834 IL17REQ8NFR9 667 aa7.56□□□□□ -1.2
TNFSF4-201ENST00000281834 C3P01024 1663 aa7.56□□□□□ -1.2
TNFSF4-201ENST00000281834 FRAT2O75474 233 aaPredicted RBP7.56□□□□□ -1.2
TNFSF4-201ENST00000281834 TEFQ10587 303 aa7.56□□□□□ -1.2
TNFSF4-201ENST00000281834 BECN1Q14457 450 aa7.56□□□□□ -1.2
TNFSF4-201ENST00000281834 NFKBIBQ15653 356 aa7.56□□□□□ -1.2
TNFSF4-201ENST00000281834 C22orf23Q9BZE7 217 aa7.56□□□□□ -1.2
TNFSF4-201ENST00000281834 KCNQ3O43525 872 aa7.55□□□□□ -1.2
TNFSF4-201ENST00000281834 GCP02774 474 aa7.55□□□□□ -1.2
TNFSF4-201ENST00000281834 NUCB1Q02818 461 aa7.55□□□□□ -1.2
TNFSF4-201ENST00000281834 CHRNA2Q15822 529 aa7.55□□□□□ -1.2
TNFSF4-201ENST00000281834 HDGFL1Q5TGJ6 251 aa7.55□□□□□ -1.2
TNFSF4-201ENST00000281834 NLRP2Q9NX02 1062 aa7.55□□□□□ -1.2
TNFSF4-201ENST00000281834 EXOC6BQ9Y2D4 811 aa7.55□□□□□ -1.2
TNFSF4-201ENST00000281834 FER1L4A9Z1Z3 1794 aa7.55□□□□□ -1.2
TNFSF4-201ENST00000281834 DIP2AQ14689 1571 aa7.55□□□□□ -1.2
TNFSF4-201ENST00000281834 ATF3P18847 181 aa7.55□□□□□ -1.2
TNFSF4-201ENST00000281834 KRT28Q7Z3Y7 464 aa7.55□□□□□ -1.2
TNFSF4-201ENST00000281834 MSH6P52701 1360 aa7.55□□□□□ -1.2
TNFSF4-201ENST00000281834 IGSF1Q8N6C5 1336 aa7.54□□□□□ -1.2
TNFSF4-201ENST00000281834 HAP1P54257 671 aaPredicted RBP7.54□□□□□ -1.2
TNFSF4-201ENST00000281834 ARHGAP45Q92619 1136 aa7.54□□□□□ -1.2
TNFSF4-201ENST00000281834 CHMP4BQ9H444 224 aaKnown RBP7.54□□□□□ -1.2
TNFSF4-201ENST00000281834 PHAXQ9H814 394 aaKnown RBP7.54□□□□□ -1.2
TNFSF4-201ENST00000281834 ABCC4O15439 1325 aa7.54□□□□□ -1.2
TNFSF4-201ENST00000281834 HSP90AA1P07900 732 aaKnown RBP7.54□□□□□ -1.2
TNFSF4-201ENST00000281834 FLIIQ13045 1269 aa7.54□□□□□ -1.2
TNFSF4-201ENST00000281834 USP31Q70CQ4 1352 aa7.54□□□□□ -1.2
TNFSF4-201ENST00000281834 ANKRD26Q9UPS8 1709 aa7.54□□□□□ -1.2
TNFSF4-201ENST00000281834 ITSN1Q15811 1721 aa7.54□□□□□ -1.2
TNFSF4-201ENST00000281834 ARHGAP23Q9P227 1491 aa7.54□□□□□ -1.2
TNFSF4-201ENST00000281834 CEP170BQ9Y4F5 1589 aaPredicted RBP7.54□□□□□ -1.2
TNFSF4-201ENST00000281834 PTCH1Q13635 1447 aa7.53□□□□□ -1.2
TNFSF4-201ENST00000281834 AIMP1Q12904 312 aaKnown RBP7.53□□□□□ -1.2
TNFSF4-201ENST00000281834 TAF7Q15545 349 aaPredicted RBP7.53□□□□□ -1.2
TNFSF4-201ENST00000281834 C1orf141Q5JVX7 400 aa7.53□□□□□ -1.2
TNFSF4-201ENST00000281834 TBC1D32Q96NH3 1257 aa7.53□□□□□ -1.2
TNFSF4-201ENST00000281834 TBC1D2Q9BYX2 928 aa7.53□□□□□ -1.2
TNFSF4-201ENST00000281834 AXIN2Q9Y2T1 843 aa7.53□□□□□ -1.2
TNFSF4-201ENST00000281834 PIK3R4Q99570 1358 aa7.53□□□□□ -1.2
TNFSF4-201ENST00000281834 RGPD8O14715 1765 aaPredicted RBP7.53□□□□□ -1.2
TNFSF4-201ENST00000281834 CCDC30Q5VVM6 783 aa7.53□□□□□ -1.2
TNFSF4-201ENST00000281834 ANKRD24Q8TF21 1146 aa7.53□□□□□ -1.2
TNFSF4-201ENST00000281834 IP6K1Q92551 441 aa7.53□□□□□ -1.2
TNFSF4-201ENST00000281834 RIMS1Q86UR5 1692 aaKnown RBP7.53□□□□□ -1.2
TNFSF4-201ENST00000281834 ARHGEF10O15013 1369 aa7.53□□□□□ -1.2
TNFSF4-201ENST00000281834 PIP4K2AP48426 406 aaPredicted RBP7.53□□□□□ -1.2
TNFSF4-201ENST00000281834 GCC1Q96CN9 775 aa7.53□□□□□ -1.2
TNFSF4-201ENST00000281834 SLIT1O75093 1534 aa7.52□□□□□ -1.2
TNFSF4-201ENST00000281834 BTBD11A6QL63 1104 aa7.52□□□□□ -1.21
TNFSF4-201ENST00000281834 CEP85Q6P2H3 762 aa7.52□□□□□ -1.21
TNFSF4-201ENST00000281834 SSH2Q76I76 1423 aa7.52□□□□□ -1.21
TNFSF4-201ENST00000281834 PRAMEF22A3QJZ6 481 aa7.52□□□□□ -1.21
TNFSF4-201ENST00000281834 SLC39A6Q13433 755 aa7.52□□□□□ -1.21
TNFSF4-201ENST00000281834 RBM42Q9BTD8 480 aaKnown RBP7.52□□□□□ -1.21
TNFSF4-201ENST00000281834 IL1RAPL2Q9NP60 686 aa7.52□□□□□ -1.21
TNFSF4-201ENST00000281834 TBC1D9Q6ZT07 1266 aa7.51□□□□□ -1.21
TNFSF4-201ENST00000281834 CHPF2Q9P2E5 772 aa7.51□□□□□ -1.21
TNFSF4-201ENST00000281834 USP35Q9P2H5 1018 aa7.51□□□□□ -1.21
TNFSF4-201ENST00000281834 LRRFIP2Q9Y608 721 aaKnown RBP7.51□□□□□ -1.21
TNFSF4-201ENST00000281834 MAP3K5Q99683 1374 aa7.51□□□□□ -1.21
TNFSF4-201ENST00000281834 INTS3Q68E01 1043 aaKnown RBP7.51□□□□□ -1.21
TNFSF4-201ENST00000281834 KCNH5Q8NCM2 988 aa7.51□□□□□ -1.21
TNFSF4-201ENST00000281834 MON2Q7Z3U7 1717 aa7.51□□□□□ -1.21
TNFSF4-201ENST00000281834 NPHP4O75161 1426 aaPredicted RBP7.51□□□□□ -1.21
TNFSF4-201ENST00000281834 CRB1P82279 1406 aa7.51□□□□□ -1.21
TNFSF4-201ENST00000281834 HSCBQ8IWL3 235 aa7.51□□□□□ -1.21
TNFSF4-201ENST00000281834 PEAK1Q9H792 1746 aa7.51□□□□□ -1.21
TNFSF4-201ENST00000281834 TRIM6-TRIM34B2RNG4 842 aa7.5□□□□□ -1.21
TNFSF4-201ENST00000281834 BRPF1P55201 1214 aaPredicted RBP7.5□□□□□ -1.21
TNFSF4-201ENST00000281834 PLEKHO1Q53GL0 409 aaPredicted RBP7.5□□□□□ -1.21
TNFSF4-201ENST00000281834 GZF1Q9H116 711 aaPredicted RBP7.5□□□□□ -1.21
TNFSF4-201ENST00000281834 A0A0G2JS52 829 aa7.5□□□□□ -1.21
TNFSF4-201ENST00000281834 PNMA6EA0A0J9YXQ4 647 aa7.5□□□□□ -1.21
TNFSF4-201ENST00000281834 PI4KAP2A4QPH2 592 aa7.5□□□□□ -1.21
TNFSF4-201ENST00000281834 HMMRO75330 724 aa7.5□□□□□ -1.21
TNFSF4-201ENST00000281834 MAP4K4O95819 1239 aaPredicted RBP7.5□□□□□ -1.21
TNFSF4-201ENST00000281834 GNAI2P04899 355 aa7.5□□□□□ -1.21
TNFSF4-201ENST00000281834 HSP90AB1P08238 724 aaKnown RBP7.5□□□□□ -1.21
TNFSF4-201ENST00000281834 ANKRD44Q8N8A2 993 aa7.5□□□□□ -1.21
TNFSF4-201ENST00000281834 PI4KAP1Q8N8J0 262 aa7.5□□□□□ -1.21
TNFSF4-201ENST00000281834 RAPGEF4Q8WZA2 1011 aa7.5□□□□□ -1.21
TNFSF4-201ENST00000281834 RILPL2Q969X0 211 aa7.5□□□□□ -1.21
TNFSF4-201ENST00000281834 C19orf44Q9H6X5 657 aa7.5□□□□□ -1.21
TNFSF4-201ENST00000281834 PTPRCP08575 1304 aa7.5□□□□□ -1.21
TNFSF4-201ENST00000281834 UBTFL1P0CB47 393 aaPredicted RBP7.5□□□□□ -1.21
TNFSF4-201ENST00000281834 MYL6BP14649 208 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms