RNA–Protein interactions for RNA: ENST00000278100.10

BCCIP-201, Transcript of BRCA2 and CDKN1A interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BCCIP, Length 1,236 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCCIP-201ENST00000278100 SYT17Q9BSW7 474 aa16.08■□□□□ 0.16
BCCIP-201ENST00000278100 ZBTB12Q9Y330 459 aaPredicted RBP16.08■□□□□ 0.16
BCCIP-201ENST00000278100 BTAF1O14981 1849 aa16.08■□□□□ 0.16
BCCIP-201ENST00000278100 MTFR1LQ9H019 292 aa16.07■□□□□ 0.16
BCCIP-201ENST00000278100 NLRP2Q9NX02 1062 aa16.07■□□□□ 0.16
BCCIP-201ENST00000278100 ABCC6O95255 1503 aa16.07■□□□□ 0.16
BCCIP-201ENST00000278100 CD163L1Q9NR16 1453 aa16.06■□□□□ 0.16
BCCIP-201ENST00000278100 PAPPAQ13219 1627 aa16.05■□□□□ 0.16
BCCIP-201ENST00000278100 CHD4Q14839 1912 aa16.05■□□□□ 0.16
BCCIP-201ENST00000278100 ERBB3P21860 1342 aa16.04■□□□□ 0.16
BCCIP-201ENST00000278100 ZNF827Q17R98 1081 aa16.04■□□□□ 0.16
BCCIP-201ENST00000278100 KLHL34Q8N239 644 aa16.04■□□□□ 0.16
BCCIP-201ENST00000278100 PLSCR2Q9NRY7 297 aa16.04■□□□□ 0.16
BCCIP-201ENST00000278100 TIMELESSQ9UNS1 1208 aa16.04■□□□□ 0.16
BCCIP-201ENST00000278100 A0A1W2PP64 1363 aa16.03■□□□□ 0.16
BCCIP-201ENST00000278100 IL2RBP14784 551 aa16.03■□□□□ 0.16
BCCIP-201ENST00000278100 ARXQ96QS3 562 aa16.03■□□□□ 0.16
BCCIP-201ENST00000278100 SGIP1Q9BQI5 828 aa16.03■□□□□ 0.16
BCCIP-201ENST00000278100 TMF1P82094 1093 aa16.02■□□□□ 0.16
BCCIP-201ENST00000278100 ANKRD24Q8TF21 1146 aa16.02■□□□□ 0.16
BCCIP-201ENST00000278100 USP54Q70EL1 1684 aa16.02■□□□□ 0.15
BCCIP-201ENST00000278100 SBNO2Q9Y2G9 1366 aa16.01■□□□□ 0.15
BCCIP-201ENST00000278100 SENP3-EIF4A1A0A087X0R7 540 aa16■□□□□ 0.15
BCCIP-201ENST00000278100 HDGFL2Q7Z4V5 671 aaPredicted RBP16■□□□□ 0.15
BCCIP-201ENST00000278100 PELP1Q8IZL8 1130 aaKnown RBP16■□□□□ 0.15
BCCIP-201ENST00000278100 CARD14Q9BXL6 1004 aa16■□□□□ 0.15
BCCIP-201ENST00000278100 LRRC4BQ9NT99 713 aa16■□□□□ 0.15
BCCIP-201ENST00000278100 USP31Q70CQ4 1352 aa16■□□□□ 0.15
BCCIP-201ENST00000278100 EIF4G2P78344 907 aaKnown RBP eCLIP15.99■□□□□ 0.15
BCCIP-201ENST00000278100 LTV1Q96GA3 475 aaPredicted RBP15.99■□□□□ 0.15
BCCIP-201ENST00000278100 TUBGCP6Q96RT7 1819 aa15.98■□□□□ 0.15
BCCIP-201ENST00000278100 KCNQ4P56696 695 aa15.98■□□□□ 0.15
BCCIP-201ENST00000278100 GPR162Q16538 588 aa15.98■□□□□ 0.15
BCCIP-201ENST00000278100 DDX54Q8TDD1 881 aaKnown RBP15.98■□□□□ 0.15
BCCIP-201ENST00000278100 GGNBP2Q9H3C7 697 aa15.98■□□□□ 0.15
BCCIP-201ENST00000278100 UTRNP46939 3433 aa15.97■□□□□ 0.15
BCCIP-201ENST00000278100 CNGB1Q14028 1251 aaPredicted RBP15.97■□□□□ 0.15
BCCIP-201ENST00000278100 DOT1LQ8TEK3 1739 aa15.97■□□□□ 0.15
BCCIP-201ENST00000278100 SYTL4Q96C24 671 aaPredicted RBP15.96■□□□□ 0.15
BCCIP-201ENST00000278100 TERF2IPQ9NYB0 399 aa15.95■□□□□ 0.14
BCCIP-201ENST00000278100 EDC4Q6P2E9 1401 aaKnown RBP15.94■□□□□ 0.14
BCCIP-201ENST00000278100 QSER1Q2KHR3 1735 aa15.94■□□□□ 0.14
BCCIP-201ENST00000278100 C1QTNF8P60827 252 aa15.94■□□□□ 0.14
BCCIP-201ENST00000278100 RGPD2P0DJD1 1756 aa15.94■□□□□ 0.14
BCCIP-201ENST00000278100 PNPLA7Q6ZV29 1317 aa15.94■□□□□ 0.14
BCCIP-201ENST00000278100 FAM208AQ9UK61 1670 aaKnown RBP15.93■□□□□ 0.14
BCCIP-201ENST00000278100 MAP3K5Q99683 1374 aa15.93■□□□□ 0.14
BCCIP-201ENST00000278100 POLD1P28340 1107 aa15.93■□□□□ 0.14
BCCIP-201ENST00000278100 FYB1O15117 783 aa15.92■□□□□ 0.14
BCCIP-201ENST00000278100 MYCNP04198 464 aaPredicted RBP15.92■□□□□ 0.14
BCCIP-201ENST00000278100 TFCP2L1Q9NZI6 479 aa15.92■□□□□ 0.14
BCCIP-201ENST00000278100 SHANK3Q9BYB0 1731 aa15.91■□□□□ 0.14
BCCIP-201ENST00000278100 PRIM1P49642 420 aaKnown RBP15.91■□□□□ 0.14
BCCIP-201ENST00000278100 RRS1Q15050 365 aaKnown RBP15.91■□□□□ 0.14
BCCIP-201ENST00000278100 NLGN2Q8NFZ4 835 aa15.91■□□□□ 0.14
BCCIP-201ENST00000278100 IP6K1Q92551 441 aa15.91■□□□□ 0.14
BCCIP-201ENST00000278100 TNNT2P45379 298 aaPredicted RBP15.9■□□□□ 0.14
BCCIP-201ENST00000278100 SLC27A3Q5K4L6 730 aa15.9■□□□□ 0.14
BCCIP-201ENST00000278100 PANK3Q9H999 370 aa15.9■□□□□ 0.14
BCCIP-201ENST00000278100 LY75O60449 1722 aa15.9■□□□□ 0.14
BCCIP-201ENST00000278100 COL24A1Q17RW2 1714 aa15.89■□□□□ 0.13
BCCIP-201ENST00000278100 PUS7Q96PZ0 661 aaKnown RBP15.89■□□□□ 0.13
BCCIP-201ENST00000278100 ANKRD36BQ8N2N9 1353 aa15.88■□□□□ 0.13
BCCIP-201ENST00000278100 NSD3Q9BZ95 1437 aa15.88■□□□□ 0.13
BCCIP-201ENST00000278100 GIGYF1O75420 1035 aaPredicted RBP15.88■□□□□ 0.13
BCCIP-201ENST00000278100 SLC16A10Q8TF71 515 aa15.88■□□□□ 0.13
BCCIP-201ENST00000278100 MAP3K19Q56UN5 1328 aa15.88■□□□□ 0.13
BCCIP-201ENST00000278100 MEGF6O75095 1541 aa15.88■□□□□ 0.13
BCCIP-201ENST00000278100 NSD2O96028 1365 aa15.87■□□□□ 0.13
BCCIP-201ENST00000278100 HOXC9P31274 260 aa15.87■□□□□ 0.13
BCCIP-201ENST00000278100 AMPHP49418 695 aa15.87■□□□□ 0.13
BCCIP-201ENST00000278100 MSL1Q68DK7 614 aa15.87■□□□□ 0.13
BCCIP-201ENST00000278100 COG3Q96JB2 828 aa15.87■□□□□ 0.13
BCCIP-201ENST00000278100 CCNL1Q9UK58 526 aaPredicted RBP15.87■□□□□ 0.13
BCCIP-201ENST00000278100 KIF7Q2M1P5 1343 aa15.87■□□□□ 0.13
BCCIP-201ENST00000278100 USHBP1Q8N6Y0 703 aa15.86■□□□□ 0.13
BCCIP-201ENST00000278100 ZCRB1Q8TBF4 217 aaKnown RBP15.85■□□□□ 0.13
BCCIP-201ENST00000278100 YBX3P16989 372 aaKnown RBP eCLIP15.84■□□□□ 0.134e-8■■□□□ 13.2
BCCIP-201ENST00000278100 EMILIN1Q9Y6C2 1016 aa15.84■□□□□ 0.13
BCCIP-201ENST00000278100 PPM1GO15355 546 aaPredicted RBP15.83■□□□□ 0.12
BCCIP-201ENST00000278100 CDCA8Q53HL2 280 aa15.83■□□□□ 0.12
BCCIP-201ENST00000278100 COL23A1Q86Y22 540 aaPredicted RBP15.83■□□□□ 0.12
BCCIP-201ENST00000278100 C5P01031 1676 aa15.83■□□□□ 0.12
BCCIP-201ENST00000278100 WASHC2AQ641Q2 1341 aa15.8■□□□□ 0.12
BCCIP-201ENST00000278100 HSP90AB2PQ58FF8 381 aa15.8■□□□□ 0.12
BCCIP-201ENST00000278100 NBPF6Q5VWK0 638 aa15.8■□□□□ 0.12
BCCIP-201ENST00000278100 NBPF4Q96M43 638 aa15.8■□□□□ 0.12
BCCIP-201ENST00000278100 WWC3Q9ULE0 1092 aa15.79■□□□□ 0.12
BCCIP-201ENST00000278100 GOLGB1Q14789 3259 aaKnown RBP15.79■□□□□ 0.12
BCCIP-201ENST00000278100 TAF1LQ8IZX4 1826 aa15.78■□□□□ 0.12
BCCIP-201ENST00000278100 SLC24A1O60721 1099 aa15.78■□□□□ 0.12
BCCIP-201ENST00000278100 GABBR2O75899 941 aa15.78■□□□□ 0.12
BCCIP-201ENST00000278100 RAPGEF4Q8WZA2 1011 aa15.78■□□□□ 0.12
BCCIP-201ENST00000278100 SMG6Q86US8 1419 aaKnown RBP15.77■□□□□ 0.12
BCCIP-201ENST00000278100 ATP10DQ9P241 1426 aa15.77■□□□□ 0.12
BCCIP-201ENST00000278100 RTL1A6NKG5 1358 aa15.77■□□□□ 0.12
BCCIP-201ENST00000278100 GRIN3BO60391 1043 aa15.77■□□□□ 0.12
BCCIP-201ENST00000278100 TOGARAM1Q9Y4F4 1720 aa15.77■□□□□ 0.11
BCCIP-201ENST00000278100 KIF20BQ96Q89 1820 aa15.76■□□□□ 0.11
BCCIP-201ENST00000278100 TATP17735 454 aaPredicted RBP15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms