RNA–Protein interactions for RNA: ENST00000275233.11

SHPRH-201, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHPRH, Length 6,649 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-201ENST00000275233 JMYQ8N9B5 988 aa14.03□□□□□ -0.16
SHPRH-201ENST00000275233 NOM1Q5C9Z4 860 aaKnown RBP14.02□□□□□ -0.16
SHPRH-201ENST00000275233 STARD3NLO95772 234 aa14.02□□□□□ -0.16
SHPRH-201ENST00000275233 MYCNP04198 464 aaPredicted RBP14.02□□□□□ -0.16
SHPRH-201ENST00000275233 AXDND1Q5T1B0 1012 aaPredicted RBP14.02□□□□□ -0.16
SHPRH-201ENST00000275233 AIDAQ96BJ3 306 aa14.02□□□□□ -0.16
SHPRH-201ENST00000275233 ANKIB1Q9P2G1 1089 aa14.02□□□□□ -0.16
SHPRH-201ENST00000275233 NOL7Q9UMY1 257 aaKnown RBP14.02□□□□□ -0.16
SHPRH-201ENST00000275233 MBD3O95983 291 aa14.02□□□□□ -0.17
SHPRH-201ENST00000275233 ZPR1O75312 459 aa14.02□□□□□ -0.17
SHPRH-201ENST00000275233 TMOD3Q9NYL9 352 aa14.02□□□□□ -0.17
SHPRH-201ENST00000275233 PDE3AQ14432 1141 aa14.02□□□□□ -0.17
SHPRH-201ENST00000275233 KIAA1107Q9UPP5 1409 aa14.01□□□□□ -0.17
SHPRH-201ENST00000275233 K7ELQ4 463 aaPredicted RBP14.01□□□□□ -0.17
SHPRH-201ENST00000275233 AEBP1Q8IUX7 1158 aa14.01□□□□□ -0.17
SHPRH-201ENST00000275233 NSD3Q9BZ95 1437 aa14.01□□□□□ -0.17
SHPRH-201ENST00000275233 CASTP20810 708 aaKnown RBP14.01□□□□□ -0.17
SHPRH-201ENST00000275233 POLR3DP05423 398 aaPredicted RBP14.01□□□□□ -0.17
SHPRH-201ENST00000275233 DHX8Q14562 1220 aaKnown RBP14□□□□□ -0.17
SHPRH-201ENST00000275233 TMEM57Q8N5G2 664 aa14□□□□□ -0.17
SHPRH-201ENST00000275233 CCDC181Q5TID7 509 aa14□□□□□ -0.17
SHPRH-201ENST00000275233 WDR63Q8IWG1 891 aa14□□□□□ -0.17
SHPRH-201ENST00000275233 SPATA32Q96LK8 384 aa14□□□□□ -0.17
SHPRH-201ENST00000275233 RBM10P98175 930 aaKnown RBP14□□□□□ -0.17
SHPRH-201ENST00000275233 SLC52A1Q9NWF4 448 aa14□□□□□ -0.17
SHPRH-201ENST00000275233 SLC4A8Q2Y0W8 1093 aa14□□□□□ -0.17
SHPRH-201ENST00000275233 CCDC184Q52MB2 194 aa14□□□□□ -0.17
SHPRH-201ENST00000275233 H0YHG0 523 aa14□□□□□ -0.17
SHPRH-201ENST00000275233 DUSP27Q5VZP5 1158 aa14□□□□□ -0.17
SHPRH-201ENST00000275233 CENPHQ9H3R5 247 aa14□□□□□ -0.17
SHPRH-201ENST00000275233 CCDC192P0DO97 292 aa14□□□□□ -0.17
SHPRH-201ENST00000275233 KRT85P78386 507 aa14□□□□□ -0.17
SHPRH-201ENST00000275233 SSR1P43307 286 aaKnown RBP13.99□□□□□ -0.17
SHPRH-201ENST00000275233 SNAPC4Q5SXM2 1469 aa13.99□□□□□ -0.17
SHPRH-201ENST00000275233 PAXIP1Q6ZW49 1069 aaPredicted RBP13.99□□□□□ -0.17
SHPRH-201ENST00000275233 CRACR2BQ8N4Y2 399 aaPredicted RBP13.99□□□□□ -0.17
SHPRH-201ENST00000275233 BOLA2Q9H3K6 86 aa13.99□□□□□ -0.17
SHPRH-201ENST00000275233 ERCC4Q92889 916 aaPredicted RBP13.99□□□□□ -0.17
SHPRH-201ENST00000275233 PIP4K2AP48426 406 aaPredicted RBP13.99□□□□□ -0.17
SHPRH-201ENST00000275233 CCDC82Q8N4S0 544 aa13.99□□□□□ -0.17
SHPRH-201ENST00000275233 ARAP1Q96P48 1450 aa13.99□□□□□ -0.17
SHPRH-201ENST00000275233 WDR33Q9C0J8 1336 aaKnown RBP13.98□□□□□ -0.17
SHPRH-201ENST00000275233 CAMK4Q16566 473 aa13.98□□□□□ -0.17
SHPRH-201ENST00000275233 TMPOP42166 694 aaKnown RBP13.98□□□□□ -0.17
SHPRH-201ENST00000275233 FAM193AP78312 1265 aa13.98□□□□□ -0.17
SHPRH-201ENST00000275233 NFE2L2Q16236 605 aa13.98□□□□□ -0.17
SHPRH-201ENST00000275233 IMMTQ16891 758 aaKnown RBP13.98□□□□□ -0.17
SHPRH-201ENST00000275233 TMOD2Q9NZR1 351 aa13.98□□□□□ -0.17
SHPRH-201ENST00000275233 DACH1Q9UI36 760 aa13.98□□□□□ -0.17
SHPRH-201ENST00000275233 SEPT7Q16181 437 aaKnown RBP13.98□□□□□ -0.17
SHPRH-201ENST00000275233 ERICH3Q5RHP9 1530 aa13.98□□□□□ -0.17
SHPRH-201ENST00000275233 HFM1A2PYH4 1435 aa13.98□□□□□ -0.17
SHPRH-201ENST00000275233 TTLL12Q14166 644 aaPredicted RBP13.98□□□□□ -0.17
SHPRH-201ENST00000275233 CEP57L1Q8IYX8 460 aa13.97□□□□□ -0.17
SHPRH-201ENST00000275233 CDKL5O76039 1030 aa13.97□□□□□ -0.17
SHPRH-201ENST00000275233 WDR78Q5VTH9 848 aa13.97□□□□□ -0.17
SHPRH-201ENST00000275233 MKNK2Q9HBH9 465 aa13.97□□□□□ -0.17
SHPRH-201ENST00000275233 CTNNA3Q9UI47 895 aa13.97□□□□□ -0.17
SHPRH-201ENST00000275233 BRPF3Q9ULD4 1205 aa13.97□□□□□ -0.17
SHPRH-201ENST00000275233 GUCY1B3Q02153 619 aa13.97□□□□□ -0.17
SHPRH-201ENST00000275233 BMP2KQ9NSY1 1161 aaPredicted RBP13.97□□□□□ -0.17
SHPRH-201ENST00000275233 F6X3S4 739 aa13.96□□□□□ -0.17
SHPRH-201ENST00000275233 CAVIN4Q5BKX8 364 aa13.96□□□□□ -0.17
SHPRH-201ENST00000275233 GPTP24298 496 aa13.96□□□□□ -0.17
SHPRH-201ENST00000275233 TRMT1LQ7Z2T5 733 aaKnown RBP13.96□□□□□ -0.17
SHPRH-201ENST00000275233 EHBP1L1Q8N3D4 1523 aa13.96□□□□□ -0.17
SHPRH-201ENST00000275233 ERLIN2O94905 339 aa13.96□□□□□ -0.17
SHPRH-201ENST00000275233 ENOX2Q16206 610 aaKnown RBP13.96□□□□□ -0.17
SHPRH-201ENST00000275233 NME9Q86XW9 330 aa13.96□□□□□ -0.17
SHPRH-201ENST00000275233 TSPYL1Q9H0U9 437 aa13.96□□□□□ -0.17
SHPRH-201ENST00000275233 SCLT1Q96NL6 688 aa13.96□□□□□ -0.17
SHPRH-201ENST00000275233 ZNF652Q9Y2D9 606 aa13.96□□□□□ -0.17
SHPRH-201ENST00000275233 CCP110O43303 1012 aa13.96□□□□□ -0.18
SHPRH-201ENST00000275233 CT47B1P0C2W7 299 aaPredicted RBP13.96□□□□□ -0.18
SHPRH-201ENST00000275233 TAX1BP1Q86VP1 789 aa13.96□□□□□ -0.18
SHPRH-201ENST00000275233 CCDC83Q8IWF9 413 aa13.96□□□□□ -0.18
SHPRH-201ENST00000275233 CCDC8Q9H0W5 538 aaPredicted RBP13.96□□□□□ -0.18
SHPRH-201ENST00000275233 NEBLO76041 1014 aa13.95□□□□□ -0.18
SHPRH-201ENST00000275233 DZIP1Q86YF9 867 aaKnown RBP13.95□□□□□ -0.18
SHPRH-201ENST00000275233 PLCD4Q9BRC7 762 aa13.95□□□□□ -0.18
SHPRH-201ENST00000275233 LARP6Q9BRS8 491 aaKnown RBP13.95□□□□□ -0.18
SHPRH-201ENST00000275233 FOXO3O43524 673 aa13.95□□□□□ -0.18
SHPRH-201ENST00000275233 FERMT3Q86UX7 667 aa13.95□□□□□ -0.18
SHPRH-201ENST00000275233 FCHSD2O94868 740 aa13.95□□□□□ -0.18
SHPRH-201ENST00000275233 MRC2Q9UBG0 1479 aa13.95□□□□□ -0.18
SHPRH-201ENST00000275233 SEC63Q9UGP8 760 aaKnown RBP13.95□□□□□ -0.18
SHPRH-201ENST00000275233 CEBPAP49715 358 aaPredicted RBP13.95□□□□□ -0.18
SHPRH-201ENST00000275233 PRPF40BQ6NWY9 871 aaKnown RBP13.95□□□□□ -0.18
SHPRH-201ENST00000275233 POGZQ7Z3K3 1410 aa13.94□□□□□ -0.18
SHPRH-201ENST00000275233 ANKRD30BQ9BXX2 1392 aa13.94□□□□□ -0.18
SHPRH-201ENST00000275233 UBA5Q9GZZ9 404 aa13.94□□□□□ -0.18
SHPRH-201ENST00000275233 HECW1Q76N89 1606 aa13.94□□□□□ -0.18
SHPRH-201ENST00000275233 RANBP6O60518 1105 aaKnown RBP13.94□□□□□ -0.18
SHPRH-201ENST00000275233 IFIT1P09914 478 aaKnown RBP13.94□□□□□ -0.18
SHPRH-201ENST00000275233 CCDC96Q2M329 555 aa13.94□□□□□ -0.18
SHPRH-201ENST00000275233 KCNH5Q8NCM2 988 aa13.94□□□□□ -0.18
SHPRH-201ENST00000275233 ATAD2Q6PL18 1390 aa13.94□□□□□ -0.18
SHPRH-201ENST00000275233 SKAP1Q86WV1 359 aa13.94□□□□□ -0.18
SHPRH-201ENST00000275233 TRMT112Q9UI30 125 aaKnown RBP13.94□□□□□ -0.18
SHPRH-201ENST00000275233 CCDC61Q9Y6R9 512 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms