RNA–Protein interactions for RNA: ENST00000274170.8

CDH18-201, Transcript of cadherin 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH18, Length 2,809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH18-201ENST00000274170 BRPF3Q9ULD4 1205 aa10.15□□□□□ -0.78
CDH18-201ENST00000274170 NEFMP07197 916 aa10.15□□□□□ -0.78
CDH18-201ENST00000274170 QSER1Q2KHR3 1735 aa10.14□□□□□ -0.79
CDH18-201ENST00000274170 NUP188Q5SRE5 1749 aa10.14□□□□□ -0.79
CDH18-201ENST00000274170 FAM98CQ17RN3 349 aaKnown RBP10.14□□□□□ -0.79
CDH18-201ENST00000274170 FAM196AQ6ZSG2 479 aa10.14□□□□□ -0.79
CDH18-201ENST00000274170 PANK3Q9H999 370 aa10.14□□□□□ -0.79
CDH18-201ENST00000274170 OVOS2A0A0G2JMS6 1433 aa10.14□□□□□ -0.79
CDH18-201ENST00000274170 PER1O15534 1290 aaPredicted RBP10.14□□□□□ -0.79
CDH18-201ENST00000274170 PRKRIP1Q9H875 184 aaPredicted RBP10.14□□□□□ -0.79
CDH18-201ENST00000274170 CCDC9Q9Y3X0 531 aaKnown RBP10.14□□□□□ -0.79
CDH18-201ENST00000274170 STRN4Q9NRL3 753 aa10.13□□□□□ -0.79
CDH18-201ENST00000274170 TOM1L2Q6ZVM7 507 aa10.13□□□□□ -0.79
CDH18-201ENST00000274170 ANKRD24Q8TF21 1146 aa10.13□□□□□ -0.79
CDH18-201ENST00000274170 ZNF831Q5JPB2 1677 aa10.12□□□□□ -0.79
CDH18-201ENST00000274170 AMER1Q5JTC6 1135 aaPredicted RBP10.12□□□□□ -0.79
CDH18-201ENST00000274170 GGNBP2Q9H3C7 697 aa10.12□□□□□ -0.79
CDH18-201ENST00000274170 PPM1GO15355 546 aaPredicted RBP10.12□□□□□ -0.79
CDH18-201ENST00000274170 LY75O60449 1722 aa10.12□□□□□ -0.79
CDH18-201ENST00000274170 PKNOX2Q96KN3 472 aa10.11□□□□□ -0.79
CDH18-201ENST00000274170 BTAF1O14981 1849 aa10.11□□□□□ -0.79
CDH18-201ENST00000274170 AMPHP49418 695 aa10.11□□□□□ -0.79
CDH18-201ENST00000274170 PODXL2Q9NZ53 605 aa10.11□□□□□ -0.79
CDH18-201ENST00000274170 LAS1LQ9Y4W2 734 aaKnown RBP10.11□□□□□ -0.79
CDH18-201ENST00000274170 DOT1LQ8TEK3 1739 aa10.1□□□□□ -0.79
CDH18-201ENST00000274170 NUDCQ9Y266 331 aa10.1□□□□□ -0.79
CDH18-201ENST00000274170 KNSTRNQ9Y448 316 aa10.1□□□□□ -0.79
CDH18-201ENST00000274170 ADAMTS7Q9UKP4 1686 aa10.1□□□□□ -0.79
CDH18-201ENST00000274170 ITGB4P16144 1822 aa10.1□□□□□ -0.79
CDH18-201ENST00000274170 VIRMAQ69YN4 1812 aaKnown RBP10.1□□□□□ -0.79
CDH18-201ENST00000274170 IL2RBP14784 551 aa10.1□□□□□ -0.79
CDH18-201ENST00000274170 GSE1Q14687 1217 aa10.1□□□□□ -0.79
CDH18-201ENST00000274170 RSPH6AQ9H0K4 717 aa10.1□□□□□ -0.79
CDH18-201ENST00000274170 DDB1Q16531 1140 aa10.09□□□□□ -0.79
CDH18-201ENST00000274170 POLKQ9UBT6 870 aa10.09□□□□□ -0.79
CDH18-201ENST00000274170 LRP5O75197 1615 aa10.09□□□□□ -0.79
CDH18-201ENST00000274170 CICQ96RK0 1608 aaPredicted RBP10.09□□□□□ -0.79
CDH18-201ENST00000274170 PDE3BQ13370 1112 aa10.09□□□□□ -0.79
CDH18-201ENST00000274170 COL24A1Q17RW2 1714 aa10.08□□□□□ -0.8
CDH18-201ENST00000274170 CSB-PGBD3P0DP91 1061 aa10.08□□□□□ -0.8
CDH18-201ENST00000274170 FAM9BQ8IZU0 186 aa10.08□□□□□ -0.8
CDH18-201ENST00000274170 MRS2Q9HD23 443 aa10.08□□□□□ -0.8
CDH18-201ENST00000274170 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.08□□□□□ -0.8
CDH18-201ENST00000274170 PAPPAQ13219 1627 aa10.08□□□□□ -0.8
CDH18-201ENST00000274170 COL3A1P02461 1466 aaPredicted RBP10.08□□□□□ -0.8
CDH18-201ENST00000274170 TCERG1O14776 1098 aaKnown RBP10.08□□□□□ -0.8
CDH18-201ENST00000274170 MEGF6O75095 1541 aa10.08□□□□□ -0.8
CDH18-201ENST00000274170 TOGARAM1Q9Y4F4 1720 aa10.07□□□□□ -0.8
CDH18-201ENST00000274170 EXOC5O00471 708 aa10.07□□□□□ -0.8
CDH18-201ENST00000274170 BACH2Q9BYV9 841 aa10.07□□□□□ -0.8
CDH18-201ENST00000274170 FAM43AQ8N2R8 423 aa10.06□□□□□ -0.8
CDH18-201ENST00000274170 BCL11BQ9C0K0 894 aaPredicted RBP10.06□□□□□ -0.8
CDH18-201ENST00000274170 SCN11AQ9UI33 1791 aa10.06□□□□□ -0.8
CDH18-201ENST00000274170 KDRP35968 1356 aa10.06□□□□□ -0.8
CDH18-201ENST00000274170 PLSCR1O15162 318 aa10.06□□□□□ -0.8
CDH18-201ENST00000274170 MS4A1P11836 297 aa10.06□□□□□ -0.8
CDH18-201ENST00000274170 BAG6P46379 1132 aa10.06□□□□□ -0.8
CDH18-201ENST00000274170 SF3B2Q13435 895 aaKnown RBP10.06□□□□□ -0.8
CDH18-201ENST00000274170 NLRP2Q9NX02 1062 aa10.06□□□□□ -0.8
CDH18-201ENST00000274170 IGSF1Q8N6C5 1336 aa10.06□□□□□ -0.8
CDH18-201ENST00000274170 PDE4AP27815 886 aa10.06□□□□□ -0.8
CDH18-201ENST00000274170 RRS1Q15050 365 aaKnown RBP10.06□□□□□ -0.8
CDH18-201ENST00000274170 MORC1Q86VD1 984 aa10.06□□□□□ -0.8
CDH18-201ENST00000274170 MARCH10Q8NA82 808 aaPredicted RBP10.06□□□□□ -0.8
CDH18-201ENST00000274170 HMGB2P26583 209 aaKnown RBP10.05□□□□□ -0.8
CDH18-201ENST00000274170 CASZ1Q86V15 1759 aa10.05□□□□□ -0.8
CDH18-201ENST00000274170 ZBTB7CA1YPR0 619 aa10.05□□□□□ -0.8
CDH18-201ENST00000274170 SOX12O15370 315 aa10.05□□□□□ -0.8
CDH18-201ENST00000274170 HSP90AB2PQ58FF8 381 aa10.05□□□□□ -0.8
CDH18-201ENST00000274170 NBPF6Q5VWK0 638 aa10.05□□□□□ -0.8
CDH18-201ENST00000274170 NBPF4Q96M43 638 aa10.05□□□□□ -0.8
CDH18-201ENST00000274170 TAF1LQ8IZX4 1826 aa10.04□□□□□ -0.8
CDH18-201ENST00000274170 NKX1-1Q15270 411 aaPredicted RBP10.04□□□□□ -0.8
CDH18-201ENST00000274170 EMILIN1Q9Y6C2 1016 aa10.04□□□□□ -0.8
CDH18-201ENST00000274170 FRAT1Q92837 279 aaPredicted RBP10.04□□□□□ -0.8
CDH18-201ENST00000274170 CAMKK2Q96RR4 588 aa10.04□□□□□ -0.8
CDH18-201ENST00000274170 KLHL34Q8N239 644 aa10.03□□□□□ -0.8
CDH18-201ENST00000274170 PCDH11XQ9BZA7 1347 aa10.03□□□□□ -0.8
CDH18-201ENST00000274170 PCDH11YQ9BZA8 1340 aa10.03□□□□□ -0.8
CDH18-201ENST00000274170 TATP17735 454 aaPredicted RBP10.02□□□□□ -0.8
CDH18-201ENST00000274170 EIF4A2Q14240 407 aaKnown RBP10.02□□□□□ -0.8
CDH18-201ENST00000274170 NFKBIBQ15653 356 aa10.02□□□□□ -0.8
CDH18-201ENST00000274170 ZCRB1Q8TBF4 217 aaKnown RBP10.02□□□□□ -0.8
CDH18-201ENST00000274170 SIPA1L3O60292 1781 aaPredicted RBP10.02□□□□□ -0.81
CDH18-201ENST00000274170 A0A0G2JS52 829 aa10.02□□□□□ -0.81
CDH18-201ENST00000274170 NPM2Q86SE8 214 aaKnown RBP10.02□□□□□ -0.81
CDH18-201ENST00000274170 EYA1Q99502 592 aa10.02□□□□□ -0.81
CDH18-201ENST00000274170 C5P01031 1676 aa10.01□□□□□ -0.81
CDH18-201ENST00000274170 FBLN1P23142 703 aa10.01□□□□□ -0.81
CDH18-201ENST00000274170 IL13P35225 146 aa10.01□□□□□ -0.81
CDH18-201ENST00000274170 RAPGEF4Q8WZA2 1011 aa10.01□□□□□ -0.81
CDH18-201ENST00000274170 POLR3GLQ9BT43 218 aa10.01□□□□□ -0.81
CDH18-201ENST00000274170 MRC1P22897 1456 aa10.01□□□□□ -0.81
CDH18-201ENST00000274170 SPG7Q9UQ90 795 aa10□□□□□ -0.81
CDH18-201ENST00000274170 AMOTQ4VCS5 1084 aa10□□□□□ -0.81
CDH18-201ENST00000274170 DDRGK1Q96HY6 314 aa10□□□□□ -0.81
CDH18-201ENST00000274170 TUBGCP6Q96RT7 1819 aa10□□□□□ -0.81
CDH18-201ENST00000274170 COL5A3P25940 1745 aaPredicted RBP9.99□□□□□ -0.81
CDH18-201ENST00000274170 UBR2Q8IWV8 1755 aa9.99□□□□□ -0.81
CDH18-201ENST00000274170 TRIM37O94972 964 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms