RNA–Protein interactions for RNA: ENST00000273179.9

CTDSPL-201, Transcript of CTD small phosphatase like, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CTDSPL, Length 4,459 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-201ENST00000273179 C10orf67Q8IYJ2 551 aa10.57□□□□□ -0.72
CTDSPL-201ENST00000273179 NAP1L4Q99733 375 aaKnown RBP10.57□□□□□ -0.72
CTDSPL-201ENST00000273179 FGD6Q6ZV73 1430 aa10.57□□□□□ -0.72
CTDSPL-201ENST00000273179 MAGI3Q5TCQ9 1506 aa10.57□□□□□ -0.72
CTDSPL-201ENST00000273179 LRRIQ1Q96JM4 1722 aa10.57□□□□□ -0.72
CTDSPL-201ENST00000273179 PBRM1Q86U86 1689 aa10.57□□□□□ -0.72
CTDSPL-201ENST00000273179 NCOA2Q15596 1464 aa10.57□□□□□ -0.72
CTDSPL-201ENST00000273179 FLT3P36888 993 aa10.57□□□□□ -0.72
CTDSPL-201ENST00000273179 CLUAP1Q96AJ1 413 aa10.57□□□□□ -0.72
CTDSPL-201ENST00000273179 RPGRIP1LQ68CZ1 1315 aa10.57□□□□□ -0.72
CTDSPL-201ENST00000273179 KIF16BQ96L93 1317 aa10.57□□□□□ -0.72
CTDSPL-201ENST00000273179 U2SURPO15042 1029 aaKnown RBP10.57□□□□□ -0.72
CTDSPL-201ENST00000273179 PRPF4BQ13523 1007 aaKnown RBP10.57□□□□□ -0.72
CTDSPL-201ENST00000273179 CCDC92Q53HC0 331 aaPredicted RBP10.57□□□□□ -0.72
CTDSPL-201ENST00000273179 ARMC9Q7Z3E5 817 aa10.57□□□□□ -0.72
CTDSPL-201ENST00000273179 MCM6Q14566 821 aa10.56□□□□□ -0.72
CTDSPL-201ENST00000273179 DNAAF4Q8WXU2 420 aa10.56□□□□□ -0.72
CTDSPL-201ENST00000273179 SASS6Q6UVJ0 657 aa10.56□□□□□ -0.72
CTDSPL-201ENST00000273179 UBAP1Q9NZ09 502 aa10.56□□□□□ -0.72
CTDSPL-201ENST00000273179 HNRNPUQ00839 825 aaKnown RBP eCLIP10.56□□□□□ -0.726e-6■□□□□ 10.9
CTDSPL-201ENST00000273179 TTC31Q49AM3 519 aaPredicted RBP10.56□□□□□ -0.72
CTDSPL-201ENST00000273179 COMMD10Q9Y6G5 202 aa10.56□□□□□ -0.72
CTDSPL-201ENST00000273179 COPB2P35606 906 aa10.56□□□□□ -0.72
CTDSPL-201ENST00000273179 MKRN3Q13064 507 aaKnown RBP10.56□□□□□ -0.72
CTDSPL-201ENST00000273179 UBA5Q9GZZ9 404 aa10.56□□□□□ -0.72
CTDSPL-201ENST00000273179 CFDP1Q9UEE9 299 aaPredicted RBP10.56□□□□□ -0.72
CTDSPL-201ENST00000273179 DIS3Q9Y2L1 958 aaKnown RBP10.56□□□□□ -0.72
CTDSPL-201ENST00000273179 MAPKBP1O60336 1514 aa10.56□□□□□ -0.72
CTDSPL-201ENST00000273179 OFD1O75665 1012 aa10.55□□□□□ -0.72
CTDSPL-201ENST00000273179 RUFY1Q96T51 708 aa10.55□□□□□ -0.72
CTDSPL-201ENST00000273179 CFAP43Q8NDM7 1665 aa10.55□□□□□ -0.72
CTDSPL-201ENST00000273179 hCG_2014768A0A024R1R8 64 aa10.55□□□□□ -0.72
CTDSPL-201ENST00000273179 TTLL5Q6EMB2 1281 aa10.55□□□□□ -0.72
CTDSPL-201ENST00000273179 ZSCAN30Q86W11 494 aa10.55□□□□□ -0.72
CTDSPL-201ENST00000273179 DDX12PQ92771 950 aa10.55□□□□□ -0.72
CTDSPL-201ENST00000273179 RABL2AQ9UBK7 228 aaPredicted RBP10.55□□□□□ -0.72
CTDSPL-201ENST00000273179 CCDC189A1A4V9 331 aa10.55□□□□□ -0.72
CTDSPL-201ENST00000273179 KCNH8Q96L42 1107 aa10.55□□□□□ -0.72
CTDSPL-201ENST00000273179 FBXO9Q9UK97 447 aaPredicted RBP10.54□□□□□ -0.72
CTDSPL-201ENST00000273179 IFT140Q96RY7 1462 aa10.54□□□□□ -0.72
CTDSPL-201ENST00000273179 MAP3K1Q13233 1512 aa10.54□□□□□ -0.72
CTDSPL-201ENST00000273179 A0A1B0GUL7 405 aa10.54□□□□□ -0.72
CTDSPL-201ENST00000273179 NAT1P18440 290 aa10.54□□□□□ -0.72
CTDSPL-201ENST00000273179 GABPB1Q06547 395 aaPredicted RBP10.54□□□□□ -0.72
CTDSPL-201ENST00000273179 C1orf131Q8NDD1 294 aaKnown RBP10.54□□□□□ -0.72
CTDSPL-201ENST00000273179 V9GYY5 206 aaPredicted RBP10.54□□□□□ -0.72
CTDSPL-201ENST00000273179 FAM114A1Q8IWE2 563 aa10.54□□□□□ -0.72
CTDSPL-201ENST00000273179 MED4Q9NPJ6 270 aa10.54□□□□□ -0.72
CTDSPL-201ENST00000273179 ADAMTS12P58397 1594 aa10.54□□□□□ -0.72
CTDSPL-201ENST00000273179 IQGAP2Q13576 1575 aa10.54□□□□□ -0.72
CTDSPL-201ENST00000273179 SAMD9Q5K651 1589 aa10.54□□□□□ -0.72
CTDSPL-201ENST00000273179 FMNL2Q96PY5 1086 aa10.54□□□□□ -0.72
CTDSPL-201ENST00000273179 SPATS2LQ9NUQ6 558 aaKnown RBP10.54□□□□□ -0.72
CTDSPL-201ENST00000273179 ECEL1O95672 775 aa10.53□□□□□ -0.72
CTDSPL-201ENST00000273179 CHCHD4Q8N4Q1 142 aa10.53□□□□□ -0.72
CTDSPL-201ENST00000273179 ZNF396Q96N95 335 aaPredicted RBP10.53□□□□□ -0.72
CTDSPL-201ENST00000273179 TRDNQ13061 729 aa10.53□□□□□ -0.72
CTDSPL-201ENST00000273179 JRKLQ9Y4A0 524 aa10.53□□□□□ -0.72
CTDSPL-201ENST00000273179 MRFAP1Q9Y605 127 aa10.53□□□□□ -0.72
CTDSPL-201ENST00000273179 GUCY2CP25092 1073 aa10.52□□□□□ -0.72
CTDSPL-201ENST00000273179 JMYQ8N9B5 988 aa10.52□□□□□ -0.72
CTDSPL-201ENST00000273179 SPC24Q8NBT2 197 aa10.52□□□□□ -0.72
CTDSPL-201ENST00000273179 ATRIPQ8WXE1 791 aa10.52□□□□□ -0.72
CTDSPL-201ENST00000273179 CRACR2AQ9BSW2 395 aa10.52□□□□□ -0.72
CTDSPL-201ENST00000273179 MNAT1P51948 309 aa10.52□□□□□ -0.73
CTDSPL-201ENST00000273179 CCDC65Q8IXS2 484 aa10.52□□□□□ -0.73
CTDSPL-201ENST00000273179 VPS37AQ8NEZ2 397 aa10.52□□□□□ -0.73
CTDSPL-201ENST00000273179 RBM33Q96EV2 1170 aaKnown RBP10.52□□□□□ -0.73
CTDSPL-201ENST00000273179 JPH4Q96JJ6 628 aa10.52□□□□□ -0.73
CTDSPL-201ENST00000273179 ITM2BQ9Y287 266 aa10.52□□□□□ -0.73
CTDSPL-201ENST00000273179 EIF4G3O43432 1585 aaKnown RBP10.52□□□□□ -0.73
CTDSPL-201ENST00000273179 HSP90B2PQ58FF3 399 aa10.52□□□□□ -0.73
CTDSPL-201ENST00000273179 IKBKGQ9Y6K9 419 aa10.52□□□□□ -0.73
CTDSPL-201ENST00000273179 CCDC173Q0VFZ6 552 aa10.52□□□□□ -0.73
CTDSPL-201ENST00000273179 PKD2Q13563 968 aa10.52□□□□□ -0.73
CTDSPL-201ENST00000273179 ZSCAN26Q16670 478 aa10.52□□□□□ -0.73
CTDSPL-201ENST00000273179 TTC30AQ86WT1 665 aa10.52□□□□□ -0.73
CTDSPL-201ENST00000273179 RSPH9Q9H1X1 276 aaPredicted RBP10.52□□□□□ -0.73
CTDSPL-201ENST00000273179 WDR62O43379 1518 aa10.51□□□□□ -0.73
CTDSPL-201ENST00000273179 PPFIA4O75335 1185 aa10.51□□□□□ -0.73
CTDSPL-201ENST00000273179 RMDN2Q96LZ7 410 aa10.51□□□□□ -0.73
CTDSPL-201ENST00000273179 SLC4A3P48751 1232 aa10.51□□□□□ -0.73
CTDSPL-201ENST00000273179 ANKRD24Q8TF21 1146 aa10.51□□□□□ -0.73
CTDSPL-201ENST00000273179 C17orf50Q8WW18 174 aa10.51□□□□□ -0.73
CTDSPL-201ENST00000273179 ARHGEF10LQ9HCE6 1279 aa10.51□□□□□ -0.73
CTDSPL-201ENST00000273179 MYOM3Q5VTT5 1437 aa10.51□□□□□ -0.73
CTDSPL-201ENST00000273179 GOLGA6L10A6NI86 522 aa10.51□□□□□ -0.73
CTDSPL-201ENST00000273179 IRX1P78414 480 aaPredicted RBP10.51□□□□□ -0.73
CTDSPL-201ENST00000273179 MYLK4Q86YV6 388 aaPredicted RBP10.51□□□□□ -0.73
CTDSPL-201ENST00000273179 CCAR1Q8IX12 1150 aaKnown RBP10.51□□□□□ -0.73
CTDSPL-201ENST00000273179 MPHOSPH6Q99547 160 aaKnown RBP10.51□□□□□ -0.73
CTDSPL-201ENST00000273179 CEP126Q9P2H0 1117 aa10.51□□□□□ -0.73
CTDSPL-201ENST00000273179 PAXBP1Q9Y5B6 917 aa10.51□□□□□ -0.73
CTDSPL-201ENST00000273179 EPRSP07814 1512 aaKnown RBP10.51□□□□□ -0.73
CTDSPL-201ENST00000273179 CARMIL2Q6F5E8 1435 aa10.51□□□□□ -0.73
CTDSPL-201ENST00000273179 CCDC196A0A1B0GTZ2 297 aa10.5□□□□□ -0.73
CTDSPL-201ENST00000273179 DNAJC14Q6Y2X3 702 aaPredicted RBP10.5□□□□□ -0.73
CTDSPL-201ENST00000273179 ABCF2Q9UG63 623 aa10.5□□□□□ -0.73
CTDSPL-201ENST00000273179 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.5□□□□□ -0.732e-6■■□□□ 12.3
CTDSPL-201ENST00000273179 CCDC146Q8IYE0 955 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms