RNA–Protein interactions for RNA: ENST00000272602.6

CNGA3-201, Transcript of cyclic nucleotide gated channel alpha 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNGA3, Length 3,470 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA3-201ENST00000272602 TMEM94Q12767 1356 aa13.2□□□□□ -0.3
CNGA3-201ENST00000272602 NUCB1Q02818 461 aa13.19□□□□□ -0.3
CNGA3-201ENST00000272602 SLC4A10Q6U841 1118 aa13.19□□□□□ -0.3
CNGA3-201ENST00000272602 C17orf53Q8N3J3 647 aaPredicted RBP13.19□□□□□ -0.3
CNGA3-201ENST00000272602 C19orf44Q9H6X5 657 aa13.19□□□□□ -0.3
CNGA3-201ENST00000272602 LMTK3Q96Q04 1460 aa13.19□□□□□ -0.3
CNGA3-201ENST00000272602 CLTCQ00610 1675 aaKnown RBP13.19□□□□□ -0.3
CNGA3-201ENST00000272602 PPIP5K1Q6PFW1 1433 aa13.19□□□□□ -0.3
CNGA3-201ENST00000272602 CDC45O75419 566 aa13.19□□□□□ -0.3
CNGA3-201ENST00000272602 CLTCL1P53675 1640 aa13.19□□□□□ -0.3
CNGA3-201ENST00000272602 ARAP3Q8WWN8 1544 aa13.19□□□□□ -0.3
CNGA3-201ENST00000272602 ST18O60284 1047 aa13.19□□□□□ -0.3
CNGA3-201ENST00000272602 A0A1W2PP64 1363 aa13.18□□□□□ -0.3
CNGA3-201ENST00000272602 BMP2KLQ5H9B9 411 aa13.18□□□□□ -0.3
CNGA3-201ENST00000272602 C8orf37Q96NL8 207 aa13.18□□□□□ -0.3
CNGA3-201ENST00000272602 SLAIN2Q9P270 581 aa13.18□□□□□ -0.3
CNGA3-201ENST00000272602 KDM5DQ9BY66 1539 aa13.18□□□□□ -0.3
CNGA3-201ENST00000272602 MAPK8IP2Q13387 824 aaPredicted RBP13.18□□□□□ -0.3
CNGA3-201ENST00000272602 GDPD2Q9HCC8 539 aa13.18□□□□□ -0.3
CNGA3-201ENST00000272602 LMBRD1Q9NUN5 540 aa13.18□□□□□ -0.3
CNGA3-201ENST00000272602 TTC21BQ7Z4L5 1316 aa13.17□□□□□ -0.3
CNGA3-201ENST00000272602 ZNF500O60304 480 aaPredicted RBP13.17□□□□□ -0.3
CNGA3-201ENST00000272602 PIP4K2AP48426 406 aaPredicted RBP13.17□□□□□ -0.3
CNGA3-201ENST00000272602 PPP4R3BQ5MIZ7 849 aa13.17□□□□□ -0.3
CNGA3-201ENST00000272602 FRMPD1Q5SYB0 1578 aa13.17□□□□□ -0.3
CNGA3-201ENST00000272602 AK9Q5TCS8 1911 aa13.17□□□□□ -0.3
CNGA3-201ENST00000272602 TERF1P54274 439 aa13.17□□□□□ -0.3
CNGA3-201ENST00000272602 ZNF445P59923 1031 aa13.17□□□□□ -0.3
CNGA3-201ENST00000272602 NGLY1Q96IV0 654 aa13.17□□□□□ -0.3
CNGA3-201ENST00000272602 CCDC94Q9BW85 323 aaPredicted RBP13.17□□□□□ -0.3
CNGA3-201ENST00000272602 DDIT3P35638 169 aa13.16□□□□□ -0.3
CNGA3-201ENST00000272602 RABEP1Q15276 862 aa13.16□□□□□ -0.3
CNGA3-201ENST00000272602 ZBTB40Q9NUA8 1239 aa13.16□□□□□ -0.3
CNGA3-201ENST00000272602 CASC1Q6TDU7 716 aa13.16□□□□□ -0.3
CNGA3-201ENST00000272602 BBXQ8WY36 941 aaPredicted RBP13.16□□□□□ -0.3
CNGA3-201ENST00000272602 TTC12Q9H892 705 aaPredicted RBP13.16□□□□□ -0.3
CNGA3-201ENST00000272602 TMEM63CQ9P1W3 806 aa13.16□□□□□ -0.3
CNGA3-201ENST00000272602 A2ML1A8K2U0 1454 aa13.16□□□□□ -0.3
CNGA3-201ENST00000272602 MPRIPQ6WCQ1 1025 aa13.16□□□□□ -0.3
CNGA3-201ENST00000272602 CADPS2Q86UW7 1296 aa13.16□□□□□ -0.3
CNGA3-201ENST00000272602 KIF2CQ99661 725 aa13.16□□□□□ -0.3
CNGA3-201ENST00000272602 ZNF771Q7L3S4 317 aaPredicted RBP13.15□□□□□ -0.3
CNGA3-201ENST00000272602 PPRC1Q5VV67 1664 aaKnown RBP13.15□□□□□ -0.3
CNGA3-201ENST00000272602 CHAF1AQ13111 956 aaPredicted RBP13.15□□□□□ -0.3
CNGA3-201ENST00000272602 HS1BP3Q53T59 392 aa13.15□□□□□ -0.3
CNGA3-201ENST00000272602 PHF23Q9BUL5 403 aaPredicted RBP13.15□□□□□ -0.3
CNGA3-201ENST00000272602 USP25Q9UHP3 1055 aa13.15□□□□□ -0.3
CNGA3-201ENST00000272602 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.15□□□□□ -0.3
CNGA3-201ENST00000272602 PHACTR3Q96KR7 559 aa13.15□□□□□ -0.3
CNGA3-201ENST00000272602 TSPY26PQ9H489 355 aa13.15□□□□□ -0.3
CNGA3-201ENST00000272602 POLKQ9UBT6 870 aa13.15□□□□□ -0.3
CNGA3-201ENST00000272602 TRPM1Q7Z4N2 1603 aa13.14□□□□□ -0.31
CNGA3-201ENST00000272602 CDK11BP21127 795 aaKnown RBP13.14□□□□□ -0.31
CNGA3-201ENST00000272602 AIMP1Q12904 312 aaKnown RBP13.14□□□□□ -0.31
CNGA3-201ENST00000272602 KRT24Q2M2I5 525 aa13.14□□□□□ -0.31
CNGA3-201ENST00000272602 LRSAM1Q6UWE0 723 aa13.14□□□□□ -0.31
CNGA3-201ENST00000272602 GPT2Q8TD30 523 aa13.14□□□□□ -0.31
CNGA3-201ENST00000272602 NSFL1CQ9UNZ2 370 aaKnown RBP13.14□□□□□ -0.31
CNGA3-201ENST00000272602 PTPRTO14522 1441 aa13.14□□□□□ -0.31
CNGA3-201ENST00000272602 PTCD1O75127 700 aaKnown RBP13.14□□□□□ -0.31
CNGA3-201ENST00000272602 TMPOP42166 694 aaKnown RBP13.14□□□□□ -0.31
CNGA3-201ENST00000272602 NEK4P51957 841 aa13.14□□□□□ -0.31
CNGA3-201ENST00000272602 RAPGEF4Q8WZA2 1011 aa13.14□□□□□ -0.31
CNGA3-201ENST00000272602 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.14□□□□□ -0.31
CNGA3-201ENST00000272602 EFCAB6Q5THR3 1501 aa13.13□□□□□ -0.31
CNGA3-201ENST00000272602 KIF3AQ9Y496 699 aa13.13□□□□□ -0.31
CNGA3-201ENST00000272602 CFAP74Q9C0B2 1584 aa13.13□□□□□ -0.31
CNGA3-201ENST00000272602 ANXA1P04083 346 aa13.13□□□□□ -0.31
CNGA3-201ENST00000272602 SYAP1Q96A49 352 aaPredicted RBP13.13□□□□□ -0.31
CNGA3-201ENST00000272602 MSH6P52701 1360 aa13.13□□□□□ -0.31
CNGA3-201ENST00000272602 INO80Q9ULG1 1556 aaPredicted RBP13.13□□□□□ -0.31
CNGA3-201ENST00000272602 C16orf71Q8IYS4 520 aaPredicted RBP13.12□□□□□ -0.31
CNGA3-201ENST00000272602 CROCC2H7BZ55 1655 aa13.12□□□□□ -0.31
CNGA3-201ENST00000272602 GCP02774 474 aa13.12□□□□□ -0.31
CNGA3-201ENST00000272602 ATAD2Q6PL18 1390 aa13.12□□□□□ -0.31
CNGA3-201ENST00000272602 POLR3AO14802 1390 aaPredicted RBP13.12□□□□□ -0.31
CNGA3-201ENST00000272602 TEFQ10587 303 aa13.11□□□□□ -0.31
CNGA3-201ENST00000272602 SPC24Q8NBT2 197 aa13.11□□□□□ -0.31
CNGA3-201ENST00000272602 GCC1Q96CN9 775 aa13.11□□□□□ -0.31
CNGA3-201ENST00000272602 PDCL2Q8N4E4 241 aa13.11□□□□□ -0.31
CNGA3-201ENST00000272602 MAP3K4Q9Y6R4 1608 aa13.11□□□□□ -0.31
CNGA3-201ENST00000272602 MCM5P33992 734 aa13.11□□□□□ -0.31
CNGA3-201ENST00000272602 HMGN5P82970 282 aaKnown RBP13.11□□□□□ -0.31
CNGA3-201ENST00000272602 ACSBG1Q96GR2 724 aa13.11□□□□□ -0.31
CNGA3-201ENST00000272602 CGNQ9P2M7 1197 aaKnown RBP13.11□□□□□ -0.31
CNGA3-201ENST00000272602 VIRMAQ69YN4 1812 aaKnown RBP13.1□□□□□ -0.31
CNGA3-201ENST00000272602 NOLC1Q14978 699 aaKnown RBP eCLIP13.1□□□□□ -0.31
CNGA3-201ENST00000272602 INTS3Q68E01 1043 aaKnown RBP13.1□□□□□ -0.31
CNGA3-201ENST00000272602 MAP3K19Q56UN5 1328 aa13.1□□□□□ -0.31
CNGA3-201ENST00000272602 PTPRMP28827 1452 aa13.1□□□□□ -0.31
CNGA3-201ENST00000272602 PLXNC1O60486 1568 aa13.1□□□□□ -0.31
CNGA3-201ENST00000272602 RNF17Q9BXT8 1623 aaKnown RBP13.1□□□□□ -0.31
CNGA3-201ENST00000272602 MBD3O95983 291 aa13.1□□□□□ -0.31
CNGA3-201ENST00000272602 SMARCA5O60264 1052 aaPredicted RBP13.09□□□□□ -0.31
CNGA3-201ENST00000272602 DMTNQ08495 405 aa13.09□□□□□ -0.31
CNGA3-201ENST00000272602 C1orf141Q5JVX7 400 aa13.09□□□□□ -0.31
CNGA3-201ENST00000272602 ZNF530Q6P9A1 599 aaPredicted RBP13.09□□□□□ -0.31
CNGA3-201ENST00000272602 PDLIM2Q96JY6 352 aa13.09□□□□□ -0.31
CNGA3-201ENST00000272602 CHMP4BQ9H444 224 aaKnown RBP13.09□□□□□ -0.31
CNGA3-201ENST00000272602 KIF13AQ9H1H9 1805 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms