RNA–Protein interactions for RNA: ENST00000269834.1

ZIM3-201, Transcript of zinc finger imprinted 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZIM3, Length 2,627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZIM3-201ENST00000269834 ERCC5P28715 1186 aaPredicted RBP9.99□□□□□ -0.81
ZIM3-201ENST00000269834 SF3A1Q15459 793 aaKnown RBP9.99□□□□□ -0.81
ZIM3-201ENST00000269834 TMEM259Q4ZIN3 620 aa9.99□□□□□ -0.81
ZIM3-201ENST00000269834 DHX38Q92620 1227 aaKnown RBP9.99□□□□□ -0.81
ZIM3-201ENST00000269834 TRPM2O94759 1503 aa9.99□□□□□ -0.81
ZIM3-201ENST00000269834 DEPDC5O75140 1603 aa9.99□□□□□ -0.81
ZIM3-201ENST00000269834 CDHR5Q9HBB8 845 aa9.99□□□□□ -0.81
ZIM3-201ENST00000269834 WDR7Q9Y4E6 1490 aa9.98□□□□□ -0.81
ZIM3-201ENST00000269834 HNRNPMP52272 730 aaKnown RBP eCLIP9.98□□□□□ -0.81
ZIM3-201ENST00000269834 CNGB1Q14028 1251 aaPredicted RBP9.98□□□□□ -0.81
ZIM3-201ENST00000269834 PRR29P0C7W0 189 aa9.98□□□□□ -0.81
ZIM3-201ENST00000269834 BIN2Q9UBW5 565 aaPredicted RBP9.98□□□□□ -0.81
ZIM3-201ENST00000269834 KDM5AP29375 1690 aaKnown RBP9.98□□□□□ -0.81
ZIM3-201ENST00000269834 LTBP4Q8N2S1 1624 aa9.97□□□□□ -0.81
ZIM3-201ENST00000269834 PARNO95453 639 aaKnown RBP9.97□□□□□ -0.81
ZIM3-201ENST00000269834 TMF1P82094 1093 aa9.97□□□□□ -0.81
ZIM3-201ENST00000269834 ABCC1P33527 1531 aa9.97□□□□□ -0.81
ZIM3-201ENST00000269834 PIK3C2GO75747 1445 aa9.97□□□□□ -0.81
ZIM3-201ENST00000269834 SCAPERQ9BY12 1400 aa9.97□□□□□ -0.81
ZIM3-201ENST00000269834 MAFBQ9Y5Q3 323 aaPredicted RBP9.97□□□□□ -0.81
ZIM3-201ENST00000269834 NPC1L1Q9UHC9 1359 aa9.96□□□□□ -0.81
ZIM3-201ENST00000269834 SOWAHDA6NJG2 315 aa9.96□□□□□ -0.81
ZIM3-201ENST00000269834 PRR7Q8TB68 274 aa9.96□□□□□ -0.81
ZIM3-201ENST00000269834 GJD4Q96KN9 370 aaPredicted RBP9.96□□□□□ -0.81
ZIM3-201ENST00000269834 IQSEC3Q9UPP2 1182 aaPredicted RBP9.96□□□□□ -0.81
ZIM3-201ENST00000269834 ASXL1Q8IXJ9 1541 aa9.96□□□□□ -0.81
ZIM3-201ENST00000269834 PPP2R2DQ66LE6 453 aa9.96□□□□□ -0.82
ZIM3-201ENST00000269834 TEX2Q8IWB9 1127 aa9.96□□□□□ -0.82
ZIM3-201ENST00000269834 LARGE2Q8N3Y3 721 aa9.96□□□□□ -0.82
ZIM3-201ENST00000269834 HMX1Q9NP08 348 aaPredicted RBP9.96□□□□□ -0.82
ZIM3-201ENST00000269834 TET3O43151 1660 aa9.96□□□□□ -0.82
ZIM3-201ENST00000269834 KDM2BQ8NHM5 1336 aa9.96□□□□□ -0.82
ZIM3-201ENST00000269834 EIF3AQ14152 1382 aaKnown RBP9.95□□□□□ -0.82
ZIM3-201ENST00000269834 ARAP3Q8WWN8 1544 aa9.95□□□□□ -0.82
ZIM3-201ENST00000269834 TBC1D9Q6ZT07 1266 aa9.95□□□□□ -0.82
ZIM3-201ENST00000269834 NBPF1Q3BBV0 1214 aa9.95□□□□□ -0.82
ZIM3-201ENST00000269834 STAC3Q96MF2 364 aa9.95□□□□□ -0.82
ZIM3-201ENST00000269834 NLGN1Q8N2Q7 840 aa9.94□□□□□ -0.82
ZIM3-201ENST00000269834 TANGO6Q9C0B7 1094 aa9.94□□□□□ -0.82
ZIM3-201ENST00000269834 PIF1Q9H611 641 aa9.94□□□□□ -0.82
ZIM3-201ENST00000269834 SALL2Q9Y467 1007 aaPredicted RBP9.94□□□□□ -0.82
ZIM3-201ENST00000269834 SCAF11Q99590 1463 aaKnown RBP9.94□□□□□ -0.82
ZIM3-201ENST00000269834 EVI5LQ96CN4 794 aa9.94□□□□□ -0.82
ZIM3-201ENST00000269834 CDCA7LQ96GN5 454 aa9.94□□□□□ -0.82
ZIM3-201ENST00000269834 ZNF521Q96K83 1311 aa9.94□□□□□ -0.82
ZIM3-201ENST00000269834 MYO3AQ8NEV4 1616 aa9.94□□□□□ -0.82
ZIM3-201ENST00000269834 USP17L8P0C7I0 530 aa9.93□□□□□ -0.82
ZIM3-201ENST00000269834 ALG2Q9H553 416 aa9.93□□□□□ -0.82
ZIM3-201ENST00000269834 PANK3Q9H999 370 aa9.93□□□□□ -0.82
ZIM3-201ENST00000269834 CLTCL1P53675 1640 aa9.93□□□□□ -0.82
ZIM3-201ENST00000269834 ZCCHC11Q5TAX3 1644 aaKnown RBP9.93□□□□□ -0.82
ZIM3-201ENST00000269834 ERCC3P19447 782 aa9.93□□□□□ -0.82
ZIM3-201ENST00000269834 FOXD4L6Q3SYB3 417 aaPredicted RBP9.93□□□□□ -0.82
ZIM3-201ENST00000269834 GORABQ5T7V8 394 aa9.93□□□□□ -0.82
ZIM3-201ENST00000269834 FOXD4L3Q6VB84 417 aaPredicted RBP9.93□□□□□ -0.82
ZIM3-201ENST00000269834 CENPQQ7L2Z9 268 aaPredicted RBP9.93□□□□□ -0.82
ZIM3-201ENST00000269834 ZNF579Q8NAF0 562 aaKnown RBP9.93□□□□□ -0.82
ZIM3-201ENST00000269834 UPF1Q92900 1129 aaKnown RBP eCLIP9.93□□□□□ -0.82
ZIM3-201ENST00000269834 CRBNQ96SW2 442 aa9.93□□□□□ -0.82
ZIM3-201ENST00000269834 IFT172Q9UG01 1749 aa9.93□□□□□ -0.82
ZIM3-201ENST00000269834 CCDC144BQ3MJ40 725 aa9.92□□□□□ -0.82
ZIM3-201ENST00000269834 SPACA7Q96KW9 195 aa9.92□□□□□ -0.82
ZIM3-201ENST00000269834 PTPRTO14522 1441 aa9.92□□□□□ -0.82
ZIM3-201ENST00000269834 ZFYVE16Q7Z3T8 1539 aa9.92□□□□□ -0.82
ZIM3-201ENST00000269834 VWDEQ8N2E2 1590 aa9.92□□□□□ -0.82
ZIM3-201ENST00000269834 HDLBPQ00341 1268 aaKnown RBP9.91□□□□□ -0.82
ZIM3-201ENST00000269834 CC2D1BQ5T0F9 858 aaKnown RBP9.91□□□□□ -0.82
ZIM3-201ENST00000269834 SENP3-EIF4A1A0A087X0R7 540 aa9.91□□□□□ -0.82
ZIM3-201ENST00000269834 PLCH2O75038 1416 aa9.91□□□□□ -0.82
ZIM3-201ENST00000269834 GLI2P10070 1586 aa9.91□□□□□ -0.82
ZIM3-201ENST00000269834 FBXO33Q7Z6M2 555 aa9.91□□□□□ -0.82
ZIM3-201ENST00000269834 RTEL1-TNFRSF6BF6WH68 1400 aa9.9□□□□□ -0.82
ZIM3-201ENST00000269834 PLEKHH1Q9ULM0 1364 aa9.9□□□□□ -0.82
ZIM3-201ENST00000269834 NEFMP07197 916 aa9.9□□□□□ -0.82
ZIM3-201ENST00000269834 ZNF710Q8N1W2 664 aa9.9□□□□□ -0.82
ZIM3-201ENST00000269834 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.9□□□□□ -0.82
ZIM3-201ENST00000269834 MYOM2P54296 1465 aa9.9□□□□□ -0.82
ZIM3-201ENST00000269834 FAM69CQ0P6D2 419 aa9.9□□□□□ -0.82
ZIM3-201ENST00000269834 APBB1IPQ7Z5R6 666 aaPredicted RBP9.9□□□□□ -0.82
ZIM3-201ENST00000269834 SGSM3Q96HU1 749 aa9.9□□□□□ -0.82
ZIM3-201ENST00000269834 NPDC1Q9NQX5 325 aaPredicted RBP9.9□□□□□ -0.82
ZIM3-201ENST00000269834 GABBR1Q9UBS5 961 aa9.9□□□□□ -0.82
ZIM3-201ENST00000269834 INO80Q9ULG1 1556 aaPredicted RBP9.9□□□□□ -0.83
ZIM3-201ENST00000269834 NINLQ9Y2I6 1382 aa9.9□□□□□ -0.83
ZIM3-201ENST00000269834 DUSP27Q5VZP5 1158 aa9.89□□□□□ -0.83
ZIM3-201ENST00000269834 RIC3Q7Z5B4 369 aa9.89□□□□□ -0.83
ZIM3-201ENST00000269834 PIK3R5Q8WYR1 880 aa9.89□□□□□ -0.83
ZIM3-201ENST00000269834 TMA7Q9Y2S6 64 aaKnown RBP9.89□□□□□ -0.83
ZIM3-201ENST00000269834 MAP3K4Q9Y6R4 1608 aa9.89□□□□□ -0.83
ZIM3-201ENST00000269834 PPP2R1AP30153 589 aa9.89□□□□□ -0.83
ZIM3-201ENST00000269834 GTF2F1P35269 517 aaKnown RBP eCLIP9.89□□□□□ -0.83
ZIM3-201ENST00000269834 FGD1P98174 961 aa9.89□□□□□ -0.83
ZIM3-201ENST00000269834 EGFLAMQ63HQ2 1017 aa9.89□□□□□ -0.83
ZIM3-201ENST00000269834 NGEFQ8N5V2 710 aa9.89□□□□□ -0.83
ZIM3-201ENST00000269834 NKTRP30414 1462 aaKnown RBP9.89□□□□□ -0.83
ZIM3-201ENST00000269834 SSFA2P28290 1259 aa9.88□□□□□ -0.83
ZIM3-201ENST00000269834 RGL3Q3MIN7 710 aa9.88□□□□□ -0.83
ZIM3-201ENST00000269834 ABCA6Q8N139 1617 aa9.88□□□□□ -0.83
ZIM3-201ENST00000269834 MAP3K9P80192 1104 aa9.88□□□□□ -0.83
ZIM3-201ENST00000269834 WDR43Q15061 677 aaKnown RBP eCLIP9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms