RNA–Protein interactions for RNA: ENST00000268896.9

PCTP-201, Transcript of phosphatidylcholine transfer protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCTP, Length 2,044 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCTP-201ENST00000268896 RARSP54136 660 aaKnown RBP20.87■□□□□ 0.93
PCTP-201ENST00000268896 NCAPD2Q15021 1401 aa20.87■□□□□ 0.93
PCTP-201ENST00000268896 C20orf194Q5TEA3 1177 aa20.87■□□□□ 0.93
PCTP-201ENST00000268896 MAP3K5Q99683 1374 aa20.87■□□□□ 0.93
PCTP-201ENST00000268896 MIS18AQ9NYP9 233 aa20.87■□□□□ 0.93
PCTP-201ENST00000268896 ABCC6O95255 1503 aa20.86■□□□□ 0.93
PCTP-201ENST00000268896 ELL2O00472 640 aaPredicted RBP20.86■□□□□ 0.93
PCTP-201ENST00000268896 PLEKHO1Q53GL0 409 aaPredicted RBP20.86■□□□□ 0.93
PCTP-201ENST00000268896 ZNF530Q6P9A1 599 aaPredicted RBP20.86■□□□□ 0.93
PCTP-201ENST00000268896 TOM1L2Q6ZVM7 507 aa20.85■□□□□ 0.93
PCTP-201ENST00000268896 LMO7Q8WWI1 1683 aa20.85■□□□□ 0.93
PCTP-201ENST00000268896 COL16A1Q07092 1604 aaPredicted RBP20.85■□□□□ 0.93
PCTP-201ENST00000268896 RAPGEF4Q8WZA2 1011 aa20.85■□□□□ 0.93
PCTP-201ENST00000268896 FRAT1Q92837 279 aaPredicted RBP20.85■□□□□ 0.93
PCTP-201ENST00000268896 CRB1P82279 1406 aa20.84■□□□□ 0.93
PCTP-201ENST00000268896 CANXP27824 592 aaKnown RBP20.84■□□□□ 0.93
PCTP-201ENST00000268896 EXOC6Q8TAG9 804 aa20.84■□□□□ 0.93
PCTP-201ENST00000268896 FAM208AQ9UK61 1670 aaKnown RBP20.84■□□□□ 0.93
PCTP-201ENST00000268896 EVA1CP58658 441 aa20.83■□□□□ 0.93
PCTP-201ENST00000268896 TSPYL6Q8N831 410 aa20.83■□□□□ 0.93
PCTP-201ENST00000268896 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.83■□□□□ 0.93
PCTP-201ENST00000268896 IL17REQ8NFR9 667 aa20.83■□□□□ 0.93
PCTP-201ENST00000268896 COL5A2P05997 1499 aaPredicted RBP20.83■□□□□ 0.93
PCTP-201ENST00000268896 WDR17Q8IZU2 1322 aa20.82■□□□□ 0.92
PCTP-201ENST00000268896 NUTM2BA6NNL0 878 aaPredicted RBP20.82■□□□□ 0.92
PCTP-201ENST00000268896 NUTM2EB1AL46 878 aaPredicted RBP20.82■□□□□ 0.92
PCTP-201ENST00000268896 TATP17735 454 aaPredicted RBP20.82■□□□□ 0.92
PCTP-201ENST00000268896 AMOTQ4VCS5 1084 aa20.82■□□□□ 0.92
PCTP-201ENST00000268896 ERICH6BQ5W0A0 696 aa20.82■□□□□ 0.92
PCTP-201ENST00000268896 NUTM2AQ8IVF1 878 aaPredicted RBP20.82■□□□□ 0.92
PCTP-201ENST00000268896 MEGF6O75095 1541 aa20.82■□□□□ 0.92
PCTP-201ENST00000268896 HTATSF1O43719 755 aaKnown RBP20.82■□□□□ 0.92
PCTP-201ENST00000268896 ADAMTS2O95450 1211 aa20.82■□□□□ 0.92
PCTP-201ENST00000268896 LARP1Q6PKG0 1096 aaKnown RBP20.82■□□□□ 0.92
PCTP-201ENST00000268896 CERKQ8TCT0 537 aa20.82■□□□□ 0.92
PCTP-201ENST00000268896 CRBNQ96SW2 442 aa20.82■□□□□ 0.92
PCTP-201ENST00000268896 LGR6Q9HBX8 967 aa20.82■□□□□ 0.92
PCTP-201ENST00000268896 BTG4Q9NY30 223 aa20.82■□□□□ 0.92
PCTP-201ENST00000268896 KRT24Q2M2I5 525 aa20.81■□□□□ 0.92
PCTP-201ENST00000268896 C1orf141Q5JVX7 400 aa20.81■□□□□ 0.92
PCTP-201ENST00000268896 MPRIPQ6WCQ1 1025 aa20.81■□□□□ 0.92
PCTP-201ENST00000268896 TSPYL4Q9UJ04 414 aa20.81■□□□□ 0.92
PCTP-201ENST00000268896 COL22A1Q8NFW1 1626 aaPredicted RBP20.81■□□□□ 0.92
PCTP-201ENST00000268896 CHL1O00533 1208 aa20.8■□□□□ 0.92
PCTP-201ENST00000268896 AKAP4Q5JQC9 854 aa20.8■□□□□ 0.92
PCTP-201ENST00000268896 C8orf58Q8NAV2 365 aa20.8■□□□□ 0.92
PCTP-201ENST00000268896 SMC4Q9NTJ3 1288 aa20.8■□□□□ 0.92
PCTP-201ENST00000268896 PPP4R2Q9NY27 417 aa20.8■□□□□ 0.92
PCTP-201ENST00000268896 USP35Q9P2H5 1018 aa20.8■□□□□ 0.92
PCTP-201ENST00000268896 TCERG1O14776 1098 aaKnown RBP20.79■□□□□ 0.92
PCTP-201ENST00000268896 CT47B1P0C2W7 299 aaPredicted RBP20.79■□□□□ 0.92
PCTP-201ENST00000268896 B4GALNT3Q6L9W6 998 aa20.79■□□□□ 0.92
PCTP-201ENST00000268896 SSH1Q8WYL5 1049 aa20.79■□□□□ 0.92
PCTP-201ENST00000268896 TWISTNBQ3B726 338 aaPredicted RBP20.78■□□□□ 0.92
PCTP-201ENST00000268896 LRRC37A3O60309 1634 aa20.77■□□□□ 0.92
PCTP-201ENST00000268896 VAMP4O75379 141 aa20.77■□□□□ 0.92
PCTP-201ENST00000268896 TNNQ9UQP3 1299 aa20.77■□□□□ 0.92
PCTP-201ENST00000268896 PELP1Q8IZL8 1130 aaKnown RBP20.76■□□□□ 0.91
PCTP-201ENST00000268896 SPG7Q9UQ90 795 aa20.75■□□□□ 0.91
PCTP-201ENST00000268896 COL14A1Q05707 1796 aaKnown RBP20.74■□□□□ 0.91
PCTP-201ENST00000268896 RNMTO43148 476 aaKnown RBP20.74■□□□□ 0.91
PCTP-201ENST00000268896 TAF7Q15545 349 aaPredicted RBP20.74■□□□□ 0.91
PCTP-201ENST00000268896 PANK1Q8TE04 598 aa20.74■□□□□ 0.91
PCTP-201ENST00000268896 CARD10Q9BWT7 1032 aa20.74■□□□□ 0.91
PCTP-201ENST00000268896 CLUAP1Q96AJ1 413 aa20.73■□□□□ 0.91
PCTP-201ENST00000268896 CEMIPQ8WUJ3 1361 aa20.73■□□□□ 0.91
PCTP-201ENST00000268896 TEFQ10587 303 aa20.73■□□□□ 0.91
PCTP-201ENST00000268896 NOB1Q9ULX3 412 aaKnown RBP20.72■□□□□ 0.91
PCTP-201ENST00000268896 VIRMAQ69YN4 1812 aaKnown RBP20.72■□□□□ 0.91
PCTP-201ENST00000268896 PHKG2P15735 406 aa20.71■□□□□ 0.91
PCTP-201ENST00000268896 ALDH1L2Q3SY69 923 aa20.7■□□□□ 0.9
PCTP-201ENST00000268896 COG6Q9Y2V7 657 aa20.7■□□□□ 0.9
PCTP-201ENST00000268896 OVOS2A0A0G2JMS6 1433 aa20.7■□□□□ 0.9
PCTP-201ENST00000268896 CYP27B1O15528 508 aa20.7■□□□□ 0.9
PCTP-201ENST00000268896 IL2RBP14784 551 aa20.7■□□□□ 0.9
PCTP-201ENST00000268896 ZKSCAN2Q63HK3 967 aa20.7■□□□□ 0.9
PCTP-201ENST00000268896 IFNL2Q8IZJ0 200 aa20.7■□□□□ 0.9
PCTP-201ENST00000268896 CCDC136Q96JN2 1154 aa20.7■□□□□ 0.9
PCTP-201ENST00000268896 RLBP1P12271 317 aa20.69■□□□□ 0.9
PCTP-201ENST00000268896 BTBD11A6QL63 1104 aa20.68■□□□□ 0.9
PCTP-201ENST00000268896 MRPL50Q8N5N7 158 aaKnown RBP20.68■□□□□ 0.9
PCTP-201ENST00000268896 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.68■□□□□ 0.9
PCTP-201ENST00000268896 PARP4Q9UKK3 1724 aaKnown RBP20.68■□□□□ 0.9
PCTP-201ENST00000268896 KCNQ3O43525 872 aa20.68■□□□□ 0.9
PCTP-201ENST00000268896 ZCRB1Q8TBF4 217 aaKnown RBP20.68■□□□□ 0.9
PCTP-201ENST00000268896 PKD1L3Q7Z443 1732 aa20.68■□□□□ 0.9
PCTP-201ENST00000268896 PLCH1Q4KWH8 1693 aa20.68■□□□□ 0.9
PCTP-201ENST00000268896 PDE3AQ14432 1141 aa20.67■□□□□ 0.9
PCTP-201ENST00000268896 ZNF428Q96B54 188 aa20.67■□□□□ 0.9
PCTP-201ENST00000268896 FTSJ3Q8IY81 847 aaKnown RBP20.66■□□□□ 0.9
PCTP-201ENST00000268896 DDX54Q8TDD1 881 aaKnown RBP20.66■□□□□ 0.9
PCTP-201ENST00000268896 NECTIN2Q92692 538 aa20.66■□□□□ 0.9
PCTP-201ENST00000268896 KDM6AO15550 1401 aaPredicted RBP20.66■□□□□ 0.9
PCTP-201ENST00000268896 TRIM27P14373 513 aa20.66■□□□□ 0.9
PCTP-201ENST00000268896 JCADQ9P266 1359 aa20.66■□□□□ 0.9
PCTP-201ENST00000268896 KIF16BQ96L93 1317 aa20.65■□□□□ 0.9
PCTP-201ENST00000268896 ATF7IPQ6VMQ6 1270 aa20.65■□□□□ 0.9
PCTP-201ENST00000268896 DZIP1LQ8IYY4 767 aaKnown RBP20.64■□□□□ 0.89
PCTP-201ENST00000268896 PCDH11XQ9BZA7 1347 aa20.64■□□□□ 0.89
PCTP-201ENST00000268896 PCDH11YQ9BZA8 1340 aa20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 152.5 ms