RNA–Protein interactions for RNA: ENST00000268673.11

PDPK1-201, Transcript of 3-phosphoinositide dependent protein kinase 1, humanhuman

TSL 1 (best) BASIC

Gene PDPK1, Length 4,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPK1-201ENST00000268673 CCDC70Q6NSX1 233 aa17.59■□□□□ 0.41
PDPK1-201ENST00000268673 ZMYM3Q14202 1370 aa17.59■□□□□ 0.41
PDPK1-201ENST00000268673 ZHX1Q9UKY1 873 aaPredicted RBP17.58■□□□□ 0.4
PDPK1-201ENST00000268673 APPP05067 770 aa17.58■□□□□ 0.4
PDPK1-201ENST00000268673 PRIM1P49642 420 aaKnown RBP17.58■□□□□ 0.4
PDPK1-201ENST00000268673 SPATA32Q96LK8 384 aa17.58■□□□□ 0.4
PDPK1-201ENST00000268673 FSD1Q9BTV5 496 aa17.58■□□□□ 0.4
PDPK1-201ENST00000268673 TNNQ9UQP3 1299 aa17.58■□□□□ 0.4
PDPK1-201ENST00000268673 KIF2AO00139 706 aaPredicted RBP17.57■□□□□ 0.4
PDPK1-201ENST00000268673 SMC2O95347 1197 aa17.57■□□□□ 0.4
PDPK1-201ENST00000268673 MX1P20591 662 aa17.57■□□□□ 0.4
PDPK1-201ENST00000268673 CREBRFQ8IUR6 639 aa17.57■□□□□ 0.4
PDPK1-201ENST00000268673 ZNF396Q96N95 335 aaPredicted RBP17.57■□□□□ 0.4
PDPK1-201ENST00000268673 EIF2AK4Q9P2K8 1649 aaKnown RBP17.57■□□□□ 0.4
PDPK1-201ENST00000268673 NPC1L1Q9UHC9 1359 aa17.57■□□□□ 0.4
PDPK1-201ENST00000268673 WDR62O43379 1518 aa17.57■□□□□ 0.4
PDPK1-201ENST00000268673 ITSN2Q9NZM3 1697 aa17.57■□□□□ 0.4
PDPK1-201ENST00000268673 PDRG1Q9NUG6 133 aa17.57■□□□□ 0.4
PDPK1-201ENST00000268673 TRIM29Q14134 588 aa17.57■□□□□ 0.4
PDPK1-201ENST00000268673 PLEKHO1Q53GL0 409 aaPredicted RBP17.57■□□□□ 0.4
PDPK1-201ENST00000268673 CGNQ9P2M7 1197 aaKnown RBP17.57■□□□□ 0.4
PDPK1-201ENST00000268673 NOL7Q9UMY1 257 aaKnown RBP17.57■□□□□ 0.4
PDPK1-201ENST00000268673 SMARCA5O60264 1052 aaPredicted RBP17.57■□□□□ 0.4
PDPK1-201ENST00000268673 ERC1Q8IUD2 1116 aa17.57■□□□□ 0.4
PDPK1-201ENST00000268673 THUMPD2Q9BTF0 503 aaKnown RBP17.57■□□□□ 0.4
PDPK1-201ENST00000268673 DNMT1P26358 1616 aaKnown RBP17.57■□□□□ 0.4
PDPK1-201ENST00000268673 AKAP17AQ02040 695 aaKnown RBP17.56■□□□□ 0.4
PDPK1-201ENST00000268673 GCC2Q8IWJ2 1684 aa17.56■□□□□ 0.4
PDPK1-201ENST00000268673 MAGI3Q5TCQ9 1506 aa17.56■□□□□ 0.4
PDPK1-201ENST00000268673 NOLC1Q14978 699 aaKnown RBP eCLIP17.56■□□□□ 0.4
PDPK1-201ENST00000268673 ADGRF5Q8IZF2 1346 aa17.56■□□□□ 0.4
PDPK1-201ENST00000268673 EXOC6BQ9Y2D4 811 aa17.55■□□□□ 0.4
PDPK1-201ENST00000268673 OLFM4Q6UX06 510 aa17.55■□□□□ 0.4
PDPK1-201ENST00000268673 RBM42Q9BTD8 480 aaKnown RBP17.55■□□□□ 0.4
PDPK1-201ENST00000268673 MARCH6O60337 910 aa17.55■□□□□ 0.4
PDPK1-201ENST00000268673 FAM135AQ9P2D6 1515 aa17.55■□□□□ 0.4
PDPK1-201ENST00000268673 FOSBP53539 338 aa17.55■□□□□ 0.4
PDPK1-201ENST00000268673 NEUROD6Q96NK8 337 aa17.55■□□□□ 0.4
PDPK1-201ENST00000268673 VPS37DQ86XT2 251 aa17.54■□□□□ 0.4
PDPK1-201ENST00000268673 JAKMIP1Q96N16 626 aaKnown RBP17.54■□□□□ 0.4
PDPK1-201ENST00000268673 ZBTB40Q9NUA8 1239 aa17.54■□□□□ 0.4
PDPK1-201ENST00000268673 CFAP45Q9UL16 551 aa17.54■□□□□ 0.4
PDPK1-201ENST00000268673 NOC3LQ8WTT2 800 aaKnown RBP17.54■□□□□ 0.4
PDPK1-201ENST00000268673 CCDC94Q9BW85 323 aaPredicted RBP17.54■□□□□ 0.4
PDPK1-201ENST00000268673 RTEL1-TNFRSF6BF6WH68 1400 aa17.54■□□□□ 0.4
PDPK1-201ENST00000268673 ADAMTS12P58397 1594 aa17.53■□□□□ 0.4
PDPK1-201ENST00000268673 ANKRD20A12PQ8NF67 263 aa17.53■□□□□ 0.4
PDPK1-201ENST00000268673 TMX3Q96JJ7 454 aa17.53■□□□□ 0.4
PDPK1-201ENST00000268673 AK7Q96M32 723 aa17.53■□□□□ 0.4
PDPK1-201ENST00000268673 UBE2HP62256 183 aa17.53■□□□□ 0.4
PDPK1-201ENST00000268673 PTPN14Q15678 1187 aa17.53■□□□□ 0.4
PDPK1-201ENST00000268673 CEP57L1Q8IYX8 460 aa17.53■□□□□ 0.4
PDPK1-201ENST00000268673 SCAND2PQ9GZW5 306 aaPredicted RBP17.53■□□□□ 0.4
PDPK1-201ENST00000268673 NUP153P49790 1475 aaKnown RBP17.53■□□□□ 0.4
PDPK1-201ENST00000268673 BLOC1S2Q6QNY1 142 aa17.53■□□□□ 0.4
PDPK1-201ENST00000268673 GDPD2Q9HCC8 539 aa17.53■□□□□ 0.4
PDPK1-201ENST00000268673 SH2B1Q9NRF2 756 aaPredicted RBP17.53■□□□□ 0.4
PDPK1-201ENST00000268673 FSD2A1L4K1 749 aa17.53■□□□□ 0.4
PDPK1-201ENST00000268673 ANKLE2Q86XL3 938 aa17.53■□□□□ 0.4
PDPK1-201ENST00000268673 SMAP1Q8IYB5 467 aaPredicted RBP17.53■□□□□ 0.4
PDPK1-201ENST00000268673 GRIN2AQ12879 1464 aa17.52■□□□□ 0.4
PDPK1-201ENST00000268673 IPO7O95373 1038 aaKnown RBP17.52■□□□□ 0.4
PDPK1-201ENST00000268673 TNNT1P13805 278 aa17.52■□□□□ 0.4
PDPK1-201ENST00000268673 TRDNQ13061 729 aa17.52■□□□□ 0.4
PDPK1-201ENST00000268673 FILIP1Q7Z7B0 1213 aa17.52■□□□□ 0.4
PDPK1-201ENST00000268673 LIMCH1Q9UPQ0 1083 aa17.52■□□□□ 0.4
PDPK1-201ENST00000268673 FMNL2Q96PY5 1086 aa17.52■□□□□ 0.39
PDPK1-201ENST00000268673 ZNF445P59923 1031 aa17.52■□□□□ 0.39
PDPK1-201ENST00000268673 CASTP20810 708 aaKnown RBP17.51■□□□□ 0.39
PDPK1-201ENST00000268673 RAPGEF6Q8TEU7 1601 aa17.51■□□□□ 0.39
PDPK1-201ENST00000268673 NOL10Q9BSC4 688 aaKnown RBP17.51■□□□□ 0.39
PDPK1-201ENST00000268673 IL1RAPL2Q9NP60 686 aa17.51■□□□□ 0.39
PDPK1-201ENST00000268673 CCDC61Q9Y6R9 512 aa17.51■□□□□ 0.39
PDPK1-201ENST00000268673 CWC27Q6UX04 472 aaKnown RBP17.51■□□□□ 0.39
PDPK1-201ENST00000268673 LEKR1Q6ZMV7 388 aa17.51■□□□□ 0.39
PDPK1-201ENST00000268673 KIF18AQ8NI77 898 aa17.51■□□□□ 0.39
PDPK1-201ENST00000268673 ERCC4Q92889 916 aaPredicted RBP17.51■□□□□ 0.39
PDPK1-201ENST00000268673 GTPBP4Q9BZE4 634 aaKnown RBP17.51■□□□□ 0.39
PDPK1-201ENST00000268673 PES1O00541 588 aaKnown RBP17.5■□□□□ 0.39
PDPK1-201ENST00000268673 NEMFO60524 1076 aa17.5■□□□□ 0.39
PDPK1-201ENST00000268673 HCLS1P14317 486 aaPredicted RBP17.5■□□□□ 0.39
PDPK1-201ENST00000268673 MEX3CQ5U5Q3 659 aaKnown RBP17.5■□□□□ 0.39
PDPK1-201ENST00000268673 SDSP20132 328 aa17.5■□□□□ 0.39
PDPK1-201ENST00000268673 CEBPZQ03701 1054 aaKnown RBP17.5■□□□□ 0.39
PDPK1-201ENST00000268673 MAP4K4O95819 1239 aaPredicted RBP17.5■□□□□ 0.39
PDPK1-201ENST00000268673 PDILTQ8N807 584 aa17.5■□□□□ 0.39
PDPK1-201ENST00000268673 CCDC83Q8IWF9 413 aa17.5■□□□□ 0.39
PDPK1-201ENST00000268673 SHANK2Q9UPX8 1470 aa17.49■□□□□ 0.39
PDPK1-201ENST00000268673 STK38Q15208 465 aa17.49■□□□□ 0.39
PDPK1-201ENST00000268673 ZNF608Q9ULD9 1512 aaPredicted RBP17.49■□□□□ 0.39
PDPK1-201ENST00000268673 STX6O43752 255 aa17.49■□□□□ 0.39
PDPK1-201ENST00000268673 HDGFL1Q5TGJ6 251 aa17.49■□□□□ 0.39
PDPK1-201ENST00000268673 CALCOCO1Q9P1Z2 691 aa17.49■□□□□ 0.39
PDPK1-201ENST00000268673 CAMK4Q16566 473 aa17.49■□□□□ 0.39
PDPK1-201ENST00000268673 C16orf45Q96MC5 204 aaPredicted RBP17.49■□□□□ 0.39
PDPK1-201ENST00000268673 PTPRCP08575 1304 aa17.49■□□□□ 0.39
PDPK1-201ENST00000268673 ANAPC15P60006 121 aa17.49■□□□□ 0.39
PDPK1-201ENST00000268673 UBXN4Q92575 508 aa17.49■□□□□ 0.39
PDPK1-201ENST00000268673 RAB11FIP3O75154 756 aa17.48■□□□□ 0.39
PDPK1-201ENST00000268673 TATP17735 454 aaPredicted RBP17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms