RNA–Protein interactions for RNA: ENST00000265334.8

CDKL3-201, Transcript of cyclin dependent kinase like 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CDKL3, Length 2,130 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3-201ENST00000265334 NUTM2GQ5VZR2 741 aa15.16■□□□□ 0.02
CDKL3-201ENST00000265334 ZBTB40Q9NUA8 1239 aa15.16■□□□□ 0.02
CDKL3-201ENST00000265334 SLIT3O75094 1523 aa15.15■□□□□ 0.02
CDKL3-201ENST00000265334 KRT28Q7Z3Y7 464 aa15.15■□□□□ 0.02
CDKL3-201ENST00000265334 KCNH5Q8NCM2 988 aa15.15■□□□□ 0.02
CDKL3-201ENST00000265334 LTN1O94822 1766 aa15.14■□□□□ 0.01
CDKL3-201ENST00000265334 ALS2Q96Q42 1657 aa15.14■□□□□ 0.01
CDKL3-201ENST00000265334 HOXC9P31274 260 aa15.14■□□□□ 0.01
CDKL3-201ENST00000265334 ITPRIPQ8IWB1 547 aa15.14■□□□□ 0.01
CDKL3-201ENST00000265334 PDZRN3Q9UPQ7 1066 aa15.14■□□□□ 0.01
CDKL3-201ENST00000265334 USP19O94966 1318 aa15.13■□□□□ 0.01
CDKL3-201ENST00000265334 DCTN1Q14203 1278 aa15.13■□□□□ 0.01
CDKL3-201ENST00000265334 C8orf58Q8NAV2 365 aa15.13■□□□□ 0.01
CDKL3-201ENST00000265334 IGSF1Q8N6C5 1336 aa15.13■□□□□ 0.01
CDKL3-201ENST00000265334 ZNF335Q9H4Z2 1342 aaPredicted RBP15.13■□□□□ 0.01
CDKL3-201ENST00000265334 CHL1O00533 1208 aa15.13■□□□□ 0.01
CDKL3-201ENST00000265334 TWISTNBQ3B726 338 aaPredicted RBP15.13■□□□□ 0.01
CDKL3-201ENST00000265334 CRB1P82279 1406 aa15.11■□□□□ 0.01
CDKL3-201ENST00000265334 NPHP3Q7Z494 1330 aa15.11■□□□□ 0.01
CDKL3-201ENST00000265334 XPCQ01831 940 aaPredicted RBP15.11■□□□□ 0.01
CDKL3-201ENST00000265334 IP6K1Q92551 441 aa15.11■□□□□ 0.01
CDKL3-201ENST00000265334 KIAA0232Q92628 1395 aa15.11■□□□□ 0.01
CDKL3-201ENST00000265334 ABCC4O15439 1325 aa15.1■□□□□ 0.01
CDKL3-201ENST00000265334 SMC5Q8IY18 1101 aa15.1■□□□□ 0.01
CDKL3-201ENST00000265334 EYA1Q99502 592 aa15.1■□□□□ 0.01
CDKL3-201ENST00000265334 GCP02774 474 aa15.09■□□□□ 0.01
CDKL3-201ENST00000265334 DDRGK1Q96HY6 314 aa15.09■□□□□ 0.01
CDKL3-201ENST00000265334 PXDNQ92626 1479 aa15.09■□□□□ 0.01
CDKL3-201ENST00000265334 ELL2O00472 640 aaPredicted RBP15.08■□□□□ 0.01
CDKL3-201ENST00000265334 ZBTB7BO15156 539 aaPredicted RBP15.08■□□□□ 0.01
CDKL3-201ENST00000265334 MCM10Q7L590 875 aa15.08■□□□□ 0
CDKL3-201ENST00000265334 ARHGEF25Q86VW2 580 aa15.08■□□□□ 0
CDKL3-201ENST00000265334 MTHFSDQ2M296 383 aaKnown RBP15.07■□□□□ 0
CDKL3-201ENST00000265334 LRRC37A3O60309 1634 aa15.07■□□□□ 0
CDKL3-201ENST00000265334 CHMP4BQ9H444 224 aaKnown RBP15.07■□□□□ 0
CDKL3-201ENST00000265334 TNS3Q68CZ2 1445 aa15.06■□□□□ 0
CDKL3-201ENST00000265334 MED1Q15648 1581 aaPredicted RBP15.06■□□□□ 0
CDKL3-201ENST00000265334 API5Q9BZZ5 524 aaKnown RBP15.06■□□□□ 0
CDKL3-201ENST00000265334 HAP1P54257 671 aaPredicted RBP15.05■□□□□ 0
CDKL3-201ENST00000265334 BRINP3Q76B58 766 aa15.05■□□□□ 0
CDKL3-201ENST00000265334 SLAIN2Q9P270 581 aa15.05■□□□□ -0
CDKL3-201ENST00000265334 HTATSF1O43719 755 aaKnown RBP15.04■□□□□ -0
CDKL3-201ENST00000265334 LMOD2Q6P5Q4 547 aa15.04■□□□□ -0
CDKL3-201ENST00000265334 GAS2L2Q8NHY3 880 aa15.04■□□□□ -0
CDKL3-201ENST00000265334 RGS12O14924 1447 aa15.04■□□□□ -0
CDKL3-201ENST00000265334 SEC24BO95487 1268 aa15.04■□□□□ -0
CDKL3-201ENST00000265334 SPATA31A3Q5VYP0 1347 aa15.03■□□□□ -0
CDKL3-201ENST00000265334 CRYBG1Q9Y4K1 1723 aa15.03■□□□□ -0
CDKL3-201ENST00000265334 KRT24Q2M2I5 525 aa15.03■□□□□ -0
CDKL3-201ENST00000265334 DDX17Q92841 729 aaKnown RBP15.03■□□□□ -0
CDKL3-201ENST00000265334 NCAPD2Q15021 1401 aa15.02■□□□□ -0
CDKL3-201ENST00000265334 NUCB1Q02818 461 aa15.02□□□□□ -0.01
CDKL3-201ENST00000265334 INTS3Q68E01 1043 aaKnown RBP15.02□□□□□ -0.01
CDKL3-201ENST00000265334 ABCC6O95255 1503 aa15.01□□□□□ -0.01
CDKL3-201ENST00000265334 SOS2Q07890 1332 aaPredicted RBP15.01□□□□□ -0.01
CDKL3-201ENST00000265334 CAMTA1Q9Y6Y1 1673 aa15.01□□□□□ -0.01
CDKL3-201ENST00000265334 RTF1Q92541 710 aaKnown RBP15.01□□□□□ -0.01
CDKL3-201ENST00000265334 LTV1Q96GA3 475 aaPredicted RBP15.01□□□□□ -0.01
CDKL3-201ENST00000265334 CACNA1FO60840 1977 aa15□□□□□ -0.01
CDKL3-201ENST00000265334 SIRT2Q8IXJ6 389 aa14.99□□□□□ -0.01
CDKL3-201ENST00000265334 PTPRCP08575 1304 aa14.99□□□□□ -0.01
CDKL3-201ENST00000265334 NBPF6Q5VWK0 638 aa14.99□□□□□ -0.01
CDKL3-201ENST00000265334 NBPF4Q96M43 638 aa14.99□□□□□ -0.01
CDKL3-201ENST00000265334 RGPD2P0DJD1 1756 aa14.99□□□□□ -0.01
CDKL3-201ENST00000265334 COL18A1P39060 1754 aa14.99□□□□□ -0.01
CDKL3-201ENST00000265334 NHSL1Q5SYE7 1610 aa14.98□□□□□ -0.01
CDKL3-201ENST00000265334 GNAT3A8MTJ3 354 aa14.98□□□□□ -0.01
CDKL3-201ENST00000265334 GCC1Q96CN9 775 aa14.98□□□□□ -0.01
CDKL3-201ENST00000265334 MIS18AQ9NYP9 233 aa14.98□□□□□ -0.01
CDKL3-201ENST00000265334 TSPYL4Q9UJ04 414 aa14.98□□□□□ -0.01
CDKL3-201ENST00000265334 CPDO75976 1380 aa14.97□□□□□ -0.01
CDKL3-201ENST00000265334 MAP3K5Q99683 1374 aa14.97□□□□□ -0.01
CDKL3-201ENST00000265334 LMO7Q8WWI1 1683 aa14.97□□□□□ -0.01
CDKL3-201ENST00000265334 CHD1LQ86WJ1 897 aa14.97□□□□□ -0.01
CDKL3-201ENST00000265334 BABAM1Q9NWV8 329 aa14.97□□□□□ -0.01
CDKL3-201ENST00000265334 ZBTB7CA1YPR0 619 aa14.96□□□□□ -0.01
CDKL3-201ENST00000265334 IL17REQ8NFR9 667 aa14.96□□□□□ -0.01
CDKL3-201ENST00000265334 ANKRD24Q8TF21 1146 aa14.96□□□□□ -0.01
CDKL3-201ENST00000265334 C1orf115Q9H7X2 142 aa14.96□□□□□ -0.01
CDKL3-201ENST00000265334 AXIN2Q9Y2T1 843 aa14.96□□□□□ -0.01
CDKL3-201ENST00000265334 RGPD5Q99666 1765 aa14.96□□□□□ -0.01
CDKL3-201ENST00000265334 FAM208AQ9UK61 1670 aaKnown RBP14.95□□□□□ -0.02
CDKL3-201ENST00000265334 ZC3H6P61129 1189 aaKnown RBP14.95□□□□□ -0.02
CDKL3-201ENST00000265334 TBC1D32Q96NH3 1257 aa14.95□□□□□ -0.02
CDKL3-201ENST00000265334 LTBP4Q8N2S1 1624 aa14.95□□□□□ -0.02
CDKL3-201ENST00000265334 ERBB3P21860 1342 aa14.95□□□□□ -0.02
CDKL3-201ENST00000265334 SOS1Q07889 1333 aaPredicted RBP14.95□□□□□ -0.02
CDKL3-201ENST00000265334 USHBP1Q8N6Y0 703 aa14.95□□□□□ -0.02
CDKL3-201ENST00000265334 ATP10DQ9P241 1426 aa14.94□□□□□ -0.02
CDKL3-201ENST00000265334 SLC4A2P04920 1241 aa14.94□□□□□ -0.02
CDKL3-201ENST00000265334 LRRC59Q96AG4 307 aaKnown RBP14.94□□□□□ -0.02
CDKL3-201ENST00000265334 PLEKHG5O94827 1062 aa14.93□□□□□ -0.02
CDKL3-201ENST00000265334 LNPKQ9C0E8 428 aa14.93□□□□□ -0.02
CDKL3-201ENST00000265334 CEMIPQ8WUJ3 1361 aa14.93□□□□□ -0.02
CDKL3-201ENST00000265334 SLC4A3P48751 1232 aa14.93□□□□□ -0.02
CDKL3-201ENST00000265334 CABLES1Q8TDN4 633 aa14.93□□□□□ -0.02
CDKL3-201ENST00000265334 NBR1Q14596 966 aa14.92□□□□□ -0.02
CDKL3-201ENST00000265334 TAF7Q15545 349 aaPredicted RBP14.92□□□□□ -0.02
CDKL3-201ENST00000265334 N4BP2Q86UW6 1770 aaPredicted RBP14.92□□□□□ -0.02
CDKL3-201ENST00000265334 PLEKHG2Q9H7P9 1386 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms