RNA–Protein interactions for RNA: ENST00000265044.6

SSR3-201, Transcript of signal sequence receptor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR3, Length 3,716 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-201ENST00000265044 BTBD11A6QL63 1104 aa11.74□□□□□ -0.53
SSR3-201ENST00000265044 TRMT2AQ8IZ69 625 aaKnown RBP11.74□□□□□ -0.53
SSR3-201ENST00000265044 SPG7Q9UQ90 795 aa11.74□□□□□ -0.53
SSR3-201ENST00000265044 DIP2AQ14689 1571 aa11.74□□□□□ -0.53
SSR3-201ENST00000265044 AMOTQ4VCS5 1084 aa11.74□□□□□ -0.53
SSR3-201ENST00000265044 CCDC30Q5VVM6 783 aa11.74□□□□□ -0.53
SSR3-201ENST00000265044 C1orf115Q9H7X2 142 aa11.74□□□□□ -0.53
SSR3-201ENST00000265044 ALDH1L2Q3SY69 923 aa11.73□□□□□ -0.53
SSR3-201ENST00000265044 SYTL4Q96C24 671 aaPredicted RBP11.73□□□□□ -0.53
SSR3-201ENST00000265044 ADAMTS2O95450 1211 aa11.72□□□□□ -0.53
SSR3-201ENST00000265044 RLBP1P12271 317 aa11.72□□□□□ -0.53
SSR3-201ENST00000265044 CDK12Q9NYV4 1490 aaPredicted RBP11.72□□□□□ -0.53
SSR3-201ENST00000265044 KAT6BQ8WYB5 2073 aa11.72□□□□□ -0.53
SSR3-201ENST00000265044 NRXN3Q9Y4C0 1643 aa11.72□□□□□ -0.53
SSR3-201ENST00000265044 VAMP4O75379 141 aa11.72□□□□□ -0.53
SSR3-201ENST00000265044 AIMP1Q12904 312 aaKnown RBP11.71□□□□□ -0.53
SSR3-201ENST00000265044 ARHGEF25Q86VW2 580 aa11.71□□□□□ -0.53
SSR3-201ENST00000265044 NCBP3Q53F19 620 aaKnown RBP11.7□□□□□ -0.54
SSR3-201ENST00000265044 ANKRD45Q5TZF3 282 aa11.7□□□□□ -0.54
SSR3-201ENST00000265044 LMTK3Q96Q04 1460 aa11.7□□□□□ -0.54
SSR3-201ENST00000265044 PDE4AP27815 886 aa11.7□□□□□ -0.54
SSR3-201ENST00000265044 OS9Q13438 667 aaPredicted RBP11.7□□□□□ -0.54
SSR3-201ENST00000265044 BRINP3Q76B58 766 aa11.7□□□□□ -0.54
SSR3-201ENST00000265044 IGSF1Q8N6C5 1336 aa11.69□□□□□ -0.54
SSR3-201ENST00000265044 CABP4P57796 275 aa11.69□□□□□ -0.54
SSR3-201ENST00000265044 AAMPQ13685 434 aa11.69□□□□□ -0.54
SSR3-201ENST00000265044 OVOS2A0A0J9YW53 1432 aa11.69□□□□□ -0.54
SSR3-201ENST00000265044 OVOS2Q6IE36 1432 aa11.69□□□□□ -0.54
SSR3-201ENST00000265044 ARHGEF10O15013 1369 aa11.69□□□□□ -0.54
SSR3-201ENST00000265044 PHF23Q9BUL5 403 aaPredicted RBP11.69□□□□□ -0.54
SSR3-201ENST00000265044 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.69□□□□□ -0.54
SSR3-201ENST00000265044 LGR6Q9HBX8 967 aa11.69□□□□□ -0.54
SSR3-201ENST00000265044 C1orf167Q5SNV9 1468 aa11.68□□□□□ -0.54
SSR3-201ENST00000265044 USP31Q70CQ4 1352 aa11.68□□□□□ -0.54
SSR3-201ENST00000265044 F6X3S4 739 aa11.68□□□□□ -0.54
SSR3-201ENST00000265044 AKAP4Q5JQC9 854 aa11.68□□□□□ -0.54
SSR3-201ENST00000265044 MAP2P11137 1827 aaKnown RBP11.68□□□□□ -0.54
SSR3-201ENST00000265044 CHL1O00533 1208 aa11.68□□□□□ -0.54
SSR3-201ENST00000265044 HMMRO75330 724 aa11.68□□□□□ -0.54
SSR3-201ENST00000265044 LNPKQ9C0E8 428 aa11.68□□□□□ -0.54
SSR3-201ENST00000265044 MAP3K5Q99683 1374 aa11.67□□□□□ -0.54
SSR3-201ENST00000265044 HTATSF1O43719 755 aaKnown RBP11.67□□□□□ -0.54
SSR3-201ENST00000265044 AXIN2Q9Y2T1 843 aa11.67□□□□□ -0.54
SSR3-201ENST00000265044 IFNL2Q8IZJ0 200 aa11.67□□□□□ -0.54
SSR3-201ENST00000265044 MRPL50Q8N5N7 158 aaKnown RBP11.67□□□□□ -0.54
SSR3-201ENST00000265044 UBAP1LF5GYI3 381 aa11.66□□□□□ -0.54
SSR3-201ENST00000265044 IGHDP01880 384 aa11.66□□□□□ -0.54
SSR3-201ENST00000265044 IL17REQ8NFR9 667 aa11.66□□□□□ -0.54
SSR3-201ENST00000265044 TOM1O60784 492 aa11.66□□□□□ -0.54
SSR3-201ENST00000265044 ANXA1P04083 346 aa11.66□□□□□ -0.54
SSR3-201ENST00000265044 SLC39A6Q13433 755 aa11.66□□□□□ -0.54
SSR3-201ENST00000265044 C9orf78Q9NZ63 289 aaPredicted RBP11.66□□□□□ -0.54
SSR3-201ENST00000265044 PDZRN3Q9UPQ7 1066 aa11.66□□□□□ -0.54
SSR3-201ENST00000265044 PCDHB15Q9Y5E8 787 aa11.66□□□□□ -0.54
SSR3-201ENST00000265044 MYL6BP14649 208 aa11.65□□□□□ -0.54
SSR3-201ENST00000265044 ITSN1Q15811 1721 aa11.65□□□□□ -0.54
SSR3-201ENST00000265044 KIAA0232Q92628 1395 aa11.65□□□□□ -0.54
SSR3-201ENST00000265044 HSP90AB1P08238 724 aaKnown RBP11.65□□□□□ -0.54
SSR3-201ENST00000265044 PTCD1O75127 700 aaKnown RBP11.65□□□□□ -0.54
SSR3-201ENST00000265044 ADAMTSL3P82987 1691 aa11.65□□□□□ -0.55
SSR3-201ENST00000265044 LRRC7Q96NW7 1537 aa11.64□□□□□ -0.55
SSR3-201ENST00000265044 USP32Q8NFA0 1604 aa11.64□□□□□ -0.55
SSR3-201ENST00000265044 DDX58O95786 925 aaKnown RBP11.64□□□□□ -0.55
SSR3-201ENST00000265044 RIC3Q7Z5B4 369 aa11.64□□□□□ -0.55
SSR3-201ENST00000265044 FLIIQ13045 1269 aa11.64□□□□□ -0.55
SSR3-201ENST00000265044 NFATC2IPQ8NCF5 419 aa11.64□□□□□ -0.55
SSR3-201ENST00000265044 BTG4Q9NY30 223 aa11.64□□□□□ -0.55
SSR3-201ENST00000265044 SPATA31A3Q5VYP0 1347 aa11.64□□□□□ -0.55
SSR3-201ENST00000265044 NEXNQ0ZGT2 675 aa11.63□□□□□ -0.55
SSR3-201ENST00000265044 FAM161AQ3B820 660 aa11.63□□□□□ -0.55
SSR3-201ENST00000265044 KIF24Q5T7B8 1368 aa11.63□□□□□ -0.55
SSR3-201ENST00000265044 ERBB3P21860 1342 aa11.63□□□□□ -0.55
SSR3-201ENST00000265044 RNMTO43148 476 aaKnown RBP11.63□□□□□ -0.55
SSR3-201ENST00000265044 UBTFL1P0CB47 393 aaPredicted RBP11.63□□□□□ -0.55
SSR3-201ENST00000265044 ZCRB1Q8TBF4 217 aaKnown RBP11.63□□□□□ -0.55
SSR3-201ENST00000265044 RBM42Q9BTD8 480 aaKnown RBP11.63□□□□□ -0.55
SSR3-201ENST00000265044 CCT4P50991 539 aaKnown RBP11.62□□□□□ -0.55
SSR3-201ENST00000265044 MEX3CQ5U5Q3 659 aaKnown RBP11.62□□□□□ -0.55
SSR3-201ENST00000265044 RTL1A6NKG5 1358 aa11.62□□□□□ -0.55
SSR3-201ENST00000265044 ARHGAP45Q92619 1136 aa11.62□□□□□ -0.55
SSR3-201ENST00000265044 KIF20BQ96Q89 1820 aa11.62□□□□□ -0.55
SSR3-201ENST00000265044 CHMP3Q9Y3E7 222 aa11.62□□□□□ -0.55
SSR3-201ENST00000265044 ZNF853P0CG23 659 aa11.61□□□□□ -0.55
SSR3-201ENST00000265044 GNAI3P08754 354 aa11.61□□□□□ -0.55
SSR3-201ENST00000265044 G2E3Q7L622 706 aa11.61□□□□□ -0.55
SSR3-201ENST00000265044 KNDC1Q76NI1 1749 aa11.61□□□□□ -0.55
SSR3-201ENST00000265044 COL3A1P02461 1466 aaPredicted RBP11.61□□□□□ -0.55
SSR3-201ENST00000265044 SRCIN1Q9C0H9 1055 aa11.61□□□□□ -0.55
SSR3-201ENST00000265044 IL2RBP14784 551 aa11.6□□□□□ -0.55
SSR3-201ENST00000265044 CHPF2Q9P2E5 772 aa11.6□□□□□ -0.55
SSR3-201ENST00000265044 PTPRCP08575 1304 aa11.6□□□□□ -0.55
SSR3-201ENST00000265044 GNAI2P04899 355 aa11.6□□□□□ -0.55
SSR3-201ENST00000265044 NGLY1Q96IV0 654 aa11.6□□□□□ -0.55
SSR3-201ENST00000265044 KCNQ3O43525 872 aa11.6□□□□□ -0.55
SSR3-201ENST00000265044 MFAP1P55081 439 aaKnown RBP11.6□□□□□ -0.55
SSR3-201ENST00000265044 DBF4Q9UBU7 674 aaPredicted RBP11.6□□□□□ -0.55
SSR3-201ENST00000265044 HDAC5Q9UQL6 1122 aa11.6□□□□□ -0.55
SSR3-201ENST00000265044 HSP90AA1P07900 732 aaKnown RBP11.59□□□□□ -0.55
SSR3-201ENST00000265044 SETD1AO15047 1707 aaKnown RBP11.59□□□□□ -0.55
SSR3-201ENST00000265044 PI4KAP2A4QPH2 592 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms