RNA–Protein interactions for RNA: ENST00000264709.7

DNMT3A-201, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 9,501 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-201ENST00000264709 C9orf78Q9NZ63 289 aaPredicted RBP13.81□□□□□ -0.2
DNMT3A-201ENST00000264709 PANK2Q9BZ23 570 aa13.81□□□□□ -0.2
DNMT3A-201ENST00000264709 CFAP65Q6ZU64 1925 aaKnown RBP13.81□□□□□ -0.2
DNMT3A-201ENST00000264709 TRIM27P14373 513 aa13.8□□□□□ -0.2
DNMT3A-201ENST00000264709 MYO6Q9UM54 1294 aa13.8□□□□□ -0.2
DNMT3A-201ENST00000264709 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.8□□□□□ -0.2
DNMT3A-201ENST00000264709 SAFBQ15424 915 aaKnown RBP eCLIP13.8□□□□□ -0.2
DNMT3A-201ENST00000264709 PRG4Q92954 1404 aaPredicted RBP13.8□□□□□ -0.2
DNMT3A-201ENST00000264709 SMTNL1A8MU46 457 aa13.8□□□□□ -0.2
DNMT3A-201ENST00000264709 DDX58O95786 925 aaKnown RBP13.8□□□□□ -0.2
DNMT3A-201ENST00000264709 GPATCH8Q9UKJ3 1502 aaKnown RBP13.8□□□□□ -0.2
DNMT3A-201ENST00000264709 KIF1BO60333 1816 aa13.79□□□□□ -0.2
DNMT3A-201ENST00000264709 CCDC191Q8NCU4 936 aa13.79□□□□□ -0.2
DNMT3A-201ENST00000264709 SPATA32Q96LK8 384 aa13.79□□□□□ -0.2
DNMT3A-201ENST00000264709 STK26Q9P289 416 aa13.79□□□□□ -0.2
DNMT3A-201ENST00000264709 FAM200AQ8TCP9 573 aa13.79□□□□□ -0.2
DNMT3A-201ENST00000264709 NOLC1Q14978 699 aaKnown RBP eCLIP13.79□□□□□ -0.2
DNMT3A-201ENST00000264709 OGFRQ9NZT2 677 aa13.79□□□□□ -0.2
DNMT3A-201ENST00000264709 TBC1D9Q6ZT07 1266 aa13.79□□□□□ -0.2
DNMT3A-201ENST00000264709 SSH1Q8WYL5 1049 aa13.79□□□□□ -0.2
DNMT3A-201ENST00000264709 GORABQ5T7V8 394 aa13.79□□□□□ -0.2
DNMT3A-201ENST00000264709 LMOD2Q6P5Q4 547 aa13.79□□□□□ -0.2
DNMT3A-201ENST00000264709 TMEM57Q8N5G2 664 aa13.78□□□□□ -0.2
DNMT3A-201ENST00000264709 G3BP1Q13283 466 aaKnown RBP eCLIP13.78□□□□□ -0.24e-6■□□□□ 9.2
DNMT3A-201ENST00000264709 MYRIPQ8NFW9 859 aa13.78□□□□□ -0.2
DNMT3A-201ENST00000264709 ADCY5O95622 1261 aa13.78□□□□□ -0.2
DNMT3A-201ENST00000264709 SSFA2P28290 1259 aa13.78□□□□□ -0.2
DNMT3A-201ENST00000264709 CCDC30Q5VVM6 783 aa13.78□□□□□ -0.2
DNMT3A-201ENST00000264709 UTP14CQ5TAP6 766 aaKnown RBP13.78□□□□□ -0.2
DNMT3A-201ENST00000264709 LARP1BQ659C4 914 aaKnown RBP13.77□□□□□ -0.2
DNMT3A-201ENST00000264709 MAST1Q9Y2H9 1570 aa13.77□□□□□ -0.2
DNMT3A-201ENST00000264709 SPC24Q8NBT2 197 aa13.77□□□□□ -0.2
DNMT3A-201ENST00000264709 GOLGA6L7A0A1B0GV03 622 aa13.77□□□□□ -0.2
DNMT3A-201ENST00000264709 SMC2O95347 1197 aa13.77□□□□□ -0.2
DNMT3A-201ENST00000264709 TRDNQ13061 729 aa13.77□□□□□ -0.2
DNMT3A-201ENST00000264709 PTPRCP08575 1304 aa13.77□□□□□ -0.21
DNMT3A-201ENST00000264709 PBRM1Q86U86 1689 aa13.77□□□□□ -0.21
DNMT3A-201ENST00000264709 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.77□□□□□ -0.21
DNMT3A-201ENST00000264709 DISP3Q9P2K9 1392 aa13.77□□□□□ -0.21
DNMT3A-201ENST00000264709 TMPOP42166 694 aaKnown RBP13.77□□□□□ -0.21
DNMT3A-201ENST00000264709 CCDC47Q96A33 483 aaKnown RBP13.77□□□□□ -0.21
DNMT3A-201ENST00000264709 LUC7LQ9NQ29 371 aaKnown RBP13.77□□□□□ -0.21
DNMT3A-201ENST00000264709 GGT6Q6P531 493 aa13.76□□□□□ -0.21
DNMT3A-201ENST00000264709 CCDC150Q8NCX0 1101 aa13.76□□□□□ -0.21
DNMT3A-201ENST00000264709 RRAGDQ9NQL2 400 aaPredicted RBP13.76□□□□□ -0.21
DNMT3A-201ENST00000264709 REREQ9P2R6 1566 aa13.76□□□□□ -0.21
DNMT3A-201ENST00000264709 PLXNC1O60486 1568 aa13.76□□□□□ -0.21
DNMT3A-201ENST00000264709 ANKRD36BQ8N2N9 1353 aa13.76□□□□□ -0.21
DNMT3A-201ENST00000264709 PUS7Q96PZ0 661 aaKnown RBP13.76□□□□□ -0.21
DNMT3A-201ENST00000264709 ANO10Q9NW15 660 aa13.76□□□□□ -0.21
DNMT3A-201ENST00000264709 RAB11FIP3O75154 756 aa13.76□□□□□ -0.21
DNMT3A-201ENST00000264709 KIAA0556O60303 1618 aa13.75□□□□□ -0.21
DNMT3A-201ENST00000264709 UPF3BQ9BZI7 483 aaKnown RBP13.75□□□□□ -0.21
DNMT3A-201ENST00000264709 PPP1R9BQ96SB3 815 aa13.75□□□□□ -0.21
DNMT3A-201ENST00000264709 CBX1P83916 185 aa13.75□□□□□ -0.21
DNMT3A-201ENST00000264709 GAS2L2Q8NHY3 880 aa13.75□□□□□ -0.21
DNMT3A-201ENST00000264709 LIMCH1Q9UPQ0 1083 aa13.75□□□□□ -0.21
DNMT3A-201ENST00000264709 PZPP20742 1482 aa13.75□□□□□ -0.21
DNMT3A-201ENST00000264709 AKAP17AQ02040 695 aaKnown RBP13.75□□□□□ -0.21
DNMT3A-201ENST00000264709 PIBF1Q8WXW3 757 aa13.75□□□□□ -0.21
DNMT3A-201ENST00000264709 FILIP1LQ4L180 1135 aa13.75□□□□□ -0.21
DNMT3A-201ENST00000264709 RASSF8Q8NHQ8 419 aa13.75□□□□□ -0.21
DNMT3A-201ENST00000264709 CLIP2Q9UDT6 1046 aa13.75□□□□□ -0.21
DNMT3A-201ENST00000264709 ZHX1Q9UKY1 873 aaPredicted RBP13.75□□□□□ -0.21
DNMT3A-201ENST00000264709 PRKAR2BP31323 418 aa13.74□□□□□ -0.21
DNMT3A-201ENST00000264709 AMPHP49418 695 aa13.74□□□□□ -0.21
DNMT3A-201ENST00000264709 STX1AQ16623 288 aa13.74□□□□□ -0.21
DNMT3A-201ENST00000264709 GOLGA6L10A6NI86 522 aa13.74□□□□□ -0.21
DNMT3A-201ENST00000264709 MX1P20591 662 aa13.74□□□□□ -0.21
DNMT3A-201ENST00000264709 ADGRL1O94910 1474 aa13.74□□□□□ -0.21
DNMT3A-201ENST00000264709 TNNT1P13805 278 aa13.74□□□□□ -0.21
DNMT3A-201ENST00000264709 NOL10Q9BSC4 688 aaKnown RBP13.74□□□□□ -0.21
DNMT3A-201ENST00000264709 TSR2Q969E8 191 aaKnown RBP13.74□□□□□ -0.21
DNMT3A-201ENST00000264709 CHMP3Q9Y3E7 222 aa13.74□□□□□ -0.21
DNMT3A-201ENST00000264709 CDKL5O76039 1030 aa13.73□□□□□ -0.21
DNMT3A-201ENST00000264709 RALYLQ86SE5 291 aaKnown RBP13.73□□□□□ -0.21
DNMT3A-201ENST00000264709 ARHGEF11O15085 1522 aa13.73□□□□□ -0.21
DNMT3A-201ENST00000264709 EPB41L2O43491 1005 aaKnown RBP13.73□□□□□ -0.21
DNMT3A-201ENST00000264709 TTC22Q5TAA0 569 aa13.73□□□□□ -0.21
DNMT3A-201ENST00000264709 ELL2O00472 640 aaPredicted RBP13.73□□□□□ -0.21
DNMT3A-201ENST00000264709 C16orf45Q96MC5 204 aaPredicted RBP13.73□□□□□ -0.21
DNMT3A-201ENST00000264709 EIF4G3O43432 1585 aaKnown RBP13.73□□□□□ -0.21
DNMT3A-201ENST00000264709 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.73□□□□□ -0.21
DNMT3A-201ENST00000264709 ZNF397Q8NF99 534 aaPredicted RBP13.73□□□□□ -0.21
DNMT3A-201ENST00000264709 NFE2L2Q16236 605 aa13.73□□□□□ -0.21
DNMT3A-201ENST00000264709 NPHP3Q7Z494 1330 aa13.72□□□□□ -0.21
DNMT3A-201ENST00000264709 CAGE1Q8TC20 777 aa13.72□□□□□ -0.21
DNMT3A-201ENST00000264709 IGHDP01880 384 aa13.72□□□□□ -0.21
DNMT3A-201ENST00000264709 STK38Q15208 465 aa13.72□□□□□ -0.21
DNMT3A-201ENST00000264709 ARHGEF5Q12774 1597 aa13.72□□□□□ -0.21
DNMT3A-201ENST00000264709 XBP1P17861 261 aa13.72□□□□□ -0.21
DNMT3A-201ENST00000264709 PES1O00541 588 aaKnown RBP13.72□□□□□ -0.21
DNMT3A-201ENST00000264709 STX6O43752 255 aa13.72□□□□□ -0.21
DNMT3A-201ENST00000264709 PDE4CQ08493 712 aa13.72□□□□□ -0.21
DNMT3A-201ENST00000264709 RRP12Q5JTH9 1297 aaKnown RBP13.72□□□□□ -0.21
DNMT3A-201ENST00000264709 ME1P48163 572 aa13.71□□□□□ -0.21
DNMT3A-201ENST00000264709 ZFYVE9O95405 1425 aa13.71□□□□□ -0.21
DNMT3A-201ENST00000264709 DNAAF4Q8WXU2 420 aa13.71□□□□□ -0.21
DNMT3A-201ENST00000264709 BLOC1S2Q6QNY1 142 aa13.71□□□□□ -0.21
DNMT3A-201ENST00000264709 CCDC83Q8IWF9 413 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms