RNA–Protein interactions for RNA: ENST00000264346.11

HERC6-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERC6, Length 3,779 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-201ENST00000264346 K7ELQ4 463 aaPredicted RBP15.32■□□□□ 0.04
HERC6-201ENST00000264346 PLEKHO1Q53GL0 409 aaPredicted RBP15.32■□□□□ 0.04
HERC6-201ENST00000264346 PPP6R1Q9UPN7 881 aa15.32■□□□□ 0.04
HERC6-201ENST00000264346 INSRP06213 1382 aa15.31■□□□□ 0.04
HERC6-201ENST00000264346 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.31■□□□□ 0.04
HERC6-201ENST00000264346 LARP6Q9BRS8 491 aaKnown RBP15.31■□□□□ 0.04
HERC6-201ENST00000264346 MADDQ8WXG6 1647 aa15.31■□□□□ 0.04
HERC6-201ENST00000264346 ZBTB7BO15156 539 aaPredicted RBP15.31■□□□□ 0.04
HERC6-201ENST00000264346 G3BP1Q13283 466 aaKnown RBP eCLIP15.31■□□□□ 0.04
HERC6-201ENST00000264346 TAF7Q15545 349 aaPredicted RBP15.31■□□□□ 0.04
HERC6-201ENST00000264346 SMC5Q8IY18 1101 aa15.31■□□□□ 0.04
HERC6-201ENST00000264346 LRRC59Q96AG4 307 aaKnown RBP15.31■□□□□ 0.04
HERC6-201ENST00000264346 MYOM2P54296 1465 aa15.31■□□□□ 0.04
HERC6-201ENST00000264346 SPHKAPQ2M3C7 1700 aa15.31■□□□□ 0.04
HERC6-201ENST00000264346 EFCAB6Q5THR3 1501 aa15.31■□□□□ 0.04
HERC6-201ENST00000264346 CHMP4AQ9BY43 222 aa15.31■□□□□ 0.04
HERC6-201ENST00000264346 MLH3Q9UHC1 1453 aa15.3■□□□□ 0.04
HERC6-201ENST00000264346 SYTL4Q96C24 671 aaPredicted RBP15.3■□□□□ 0.04
HERC6-201ENST00000264346 TAF7LQ5H9L4 462 aa15.3■□□□□ 0.04
HERC6-201ENST00000264346 KAT6BQ8WYB5 2073 aa15.3■□□□□ 0.04
HERC6-201ENST00000264346 HSP90B1P14625 803 aaKnown RBP15.29■□□□□ 0.04
HERC6-201ENST00000264346 CAVIN1Q6NZI2 390 aaKnown RBP15.29■□□□□ 0.04
HERC6-201ENST00000264346 MAP3K4Q9Y6R4 1608 aa15.29■□□□□ 0.04
HERC6-201ENST00000264346 ERC2O15083 957 aa15.29■□□□□ 0.04
HERC6-201ENST00000264346 PRPF40AO75400 957 aaKnown RBP15.29■□□□□ 0.04
HERC6-201ENST00000264346 MSNP26038 577 aaKnown RBP15.29■□□□□ 0.04
HERC6-201ENST00000264346 BMP2KLQ5H9B9 411 aa15.29■□□□□ 0.04
HERC6-201ENST00000264346 CLASRPQ8N2M8 674 aaKnown RBP15.29■□□□□ 0.04
HERC6-201ENST00000264346 EVA1CP58658 441 aa15.29■□□□□ 0.04
HERC6-201ENST00000264346 RNF214Q8ND24 703 aa15.29■□□□□ 0.04
HERC6-201ENST00000264346 JARID2Q92833 1246 aaPredicted RBP15.29■□□□□ 0.04
HERC6-201ENST00000264346 DDX58O95786 925 aaKnown RBP15.28■□□□□ 0.04
HERC6-201ENST00000264346 RABEP1Q15276 862 aa15.28■□□□□ 0.04
HERC6-201ENST00000264346 RNF17Q9BXT8 1623 aaKnown RBP15.27■□□□□ 0.04
HERC6-201ENST00000264346 FOSBP53539 338 aa15.27■□□□□ 0.04
HERC6-201ENST00000264346 NEUROD6Q96NK8 337 aa15.27■□□□□ 0.04
HERC6-201ENST00000264346 STRN4Q9NRL3 753 aa15.27■□□□□ 0.04
HERC6-201ENST00000264346 SSFA2P28290 1259 aa15.27■□□□□ 0.03
HERC6-201ENST00000264346 CWC27Q6UX04 472 aaKnown RBP15.27■□□□□ 0.03
HERC6-201ENST00000264346 NEO1Q92859 1461 aa15.27■□□□□ 0.03
HERC6-201ENST00000264346 ABCC3O15438 1527 aa15.27■□□□□ 0.03
HERC6-201ENST00000264346 PI4KAP2A4QPH2 592 aa15.26■□□□□ 0.03
HERC6-201ENST00000264346 VPS37CA5D8V6 355 aaPredicted RBP15.26■□□□□ 0.03
HERC6-201ENST00000264346 PIP4K2AP48426 406 aaPredicted RBP15.26■□□□□ 0.03
HERC6-201ENST00000264346 RBM10P98175 930 aaKnown RBP15.26■□□□□ 0.03
HERC6-201ENST00000264346 PI4KAP1Q8N8J0 262 aa15.26■□□□□ 0.03
HERC6-201ENST00000264346 SDSP20132 328 aa15.26■□□□□ 0.03
HERC6-201ENST00000264346 PODXL2Q9NZ53 605 aa15.26■□□□□ 0.03
HERC6-201ENST00000264346 ABCA6Q8N139 1617 aa15.25■□□□□ 0.03
HERC6-201ENST00000264346 CEP152O94986 1710 aa15.25■□□□□ 0.03
HERC6-201ENST00000264346 MPNDQ8N594 471 aa15.25■□□□□ 0.03
HERC6-201ENST00000264346 ARHGAP45Q92619 1136 aa15.25■□□□□ 0.03
HERC6-201ENST00000264346 HDAC5Q9UQL6 1122 aa15.25■□□□□ 0.03
HERC6-201ENST00000264346 SHROOM2Q13796 1616 aa15.25■□□□□ 0.03
HERC6-201ENST00000264346 MX1P20591 662 aa15.25■□□□□ 0.03
HERC6-201ENST00000264346 CHRNA2Q15822 529 aa15.25■□□□□ 0.03
HERC6-201ENST00000264346 TNPO1Q92973 898 aaKnown RBP15.25■□□□□ 0.03
HERC6-201ENST00000264346 NUCB2P80303 420 aa15.25■□□□□ 0.03
HERC6-201ENST00000264346 CLASP1Q7Z460 1538 aa15.24■□□□□ 0.03
HERC6-201ENST00000264346 PRR36Q9H6K5 1346 aa15.24■□□□□ 0.03
HERC6-201ENST00000264346 PHAXQ9H814 394 aaKnown RBP15.24■□□□□ 0.03
HERC6-201ENST00000264346 CCDC85AQ96PX6 553 aaPredicted RBP15.24■□□□□ 0.03
HERC6-201ENST00000264346 HECW2Q9P2P5 1572 aa15.23■□□□□ 0.03
HERC6-201ENST00000264346 POLR1AO95602 1720 aaPredicted RBP15.23■□□□□ 0.03
HERC6-201ENST00000264346 NPHP1O15259 732 aa15.23■□□□□ 0.03
HERC6-201ENST00000264346 SKOR2Q2VWA4 1001 aaPredicted RBP15.23■□□□□ 0.03
HERC6-201ENST00000264346 ANKRD44Q8N8A2 993 aa15.23■□□□□ 0.03
HERC6-201ENST00000264346 DTNBO60941 627 aa15.23■□□□□ 0.03
HERC6-201ENST00000264346 SLC39A6Q13433 755 aa15.23■□□□□ 0.03
HERC6-201ENST00000264346 TTC22Q5TAA0 569 aa15.23■□□□□ 0.03
HERC6-201ENST00000264346 CEP85Q6P2H3 762 aa15.23■□□□□ 0.03
HERC6-201ENST00000264346 CABLES1Q8TDN4 633 aa15.23■□□□□ 0.03
HERC6-201ENST00000264346 DNAJC2Q99543 621 aaKnown RBP15.23■□□□□ 0.03
HERC6-201ENST00000264346 FSD1Q9BTV5 496 aa15.23■□□□□ 0.03
HERC6-201ENST00000264346 CHPF2Q9P2E5 772 aa15.23■□□□□ 0.03
HERC6-201ENST00000264346 PTCD1O75127 700 aaKnown RBP15.22■□□□□ 0.03
HERC6-201ENST00000264346 ZKSCAN1P17029 563 aaPredicted RBP15.22■□□□□ 0.03
HERC6-201ENST00000264346 PPP1R42Q7Z4L9 355 aa15.22■□□□□ 0.03
HERC6-201ENST00000264346 PTMSP20962 102 aa15.22■□□□□ 0.03
HERC6-201ENST00000264346 CNTROBQ8N137 903 aa15.22■□□□□ 0.03
HERC6-201ENST00000264346 ZFYVE9O95405 1425 aa15.22■□□□□ 0.03
HERC6-201ENST00000264346 EDC4Q6P2E9 1401 aaKnown RBP15.22■□□□□ 0.03
HERC6-201ENST00000264346 ZRSR1Q15695 479 aaKnown RBP15.22■□□□□ 0.03
HERC6-201ENST00000264346 AACSQ86V21 672 aa15.22■□□□□ 0.03
HERC6-201ENST00000264346 PLEKHM2Q8IWE5 1019 aa15.22■□□□□ 0.03
HERC6-201ENST00000264346 RUFY2Q8WXA3 655 aa15.22■□□□□ 0.03
HERC6-201ENST00000264346 FAM177BA6PVY3 158 aa15.21■□□□□ 0.03
HERC6-201ENST00000264346 TATP17735 454 aaPredicted RBP15.21■□□□□ 0.03
HERC6-201ENST00000264346 SMC3Q9UQE7 1217 aa15.21■□□□□ 0.03
HERC6-201ENST00000264346 PTPRCP08575 1304 aa15.21■□□□□ 0.02
HERC6-201ENST00000264346 HSP90AB4PQ58FF6 505 aa15.2■□□□□ 0.02
HERC6-201ENST00000264346 CCDC8Q9H0W5 538 aaPredicted RBP15.2■□□□□ 0.02
HERC6-201ENST00000264346 SPG7Q9UQ90 795 aa15.2■□□□□ 0.02
HERC6-201ENST00000264346 PPRC1Q5VV67 1664 aaKnown RBP15.2■□□□□ 0.02
HERC6-201ENST00000264346 DNAAF4Q8WXU2 420 aa15.2■□□□□ 0.02
HERC6-201ENST00000264346 ORAI2Q96SN7 254 aa15.2■□□□□ 0.02
HERC6-201ENST00000264346 DCTPP1Q9H773 170 aa15.2■□□□□ 0.02
HERC6-201ENST00000264346 MSH6P52701 1360 aa15.2■□□□□ 0.02
HERC6-201ENST00000264346 CHL1O00533 1208 aa15.19■□□□□ 0.02
HERC6-201ENST00000264346 TOM1L2Q6ZVM7 507 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms