RNA–Protein interactions for RNA: ENST00000263735.8

EPCAM-201, Transcript of epithelial cell adhesion molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPCAM, Length 1,724 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-201ENST00000263735 CT47B1P0C2W7 299 aaPredicted RBP30.96■■■□□ 2.55
EPCAM-201ENST00000263735 ZNF853P0CG23 659 aa30.95■■■□□ 2.55
EPCAM-201ENST00000263735 RTF1Q92541 710 aaKnown RBP30.95■■■□□ 2.55
EPCAM-201ENST00000263735 CSB-PGBD3P0DP91 1061 aa30.95■■■□□ 2.54
EPCAM-201ENST00000263735 IRX6P78412 446 aaPredicted RBP30.95■■■□□ 2.54
EPCAM-201ENST00000263735 CFAP44Q96MT7 982 aa30.95■■■□□ 2.54
EPCAM-201ENST00000263735 NLRP2Q9NX02 1062 aa30.95■■■□□ 2.54
EPCAM-201ENST00000263735 GNAT3A8MTJ3 354 aa30.94■■■□□ 2.54
EPCAM-201ENST00000263735 DCTN1Q14203 1278 aa30.94■■■□□ 2.54
EPCAM-201ENST00000263735 PLCH1Q4KWH8 1693 aa30.93■■■□□ 2.54
EPCAM-201ENST00000263735 AMOTQ4VCS5 1084 aa30.93■■■□□ 2.54
EPCAM-201ENST00000263735 WDR17Q8IZU2 1322 aa30.93■■■□□ 2.54
EPCAM-201ENST00000263735 PLEKHO1Q53GL0 409 aaPredicted RBP30.92■■■□□ 2.54
EPCAM-201ENST00000263735 MCM10Q7L590 875 aa30.92■■■□□ 2.54
EPCAM-201ENST00000263735 CRB1P82279 1406 aa30.92■■■□□ 2.54
EPCAM-201ENST00000263735 CERKQ8TCT0 537 aa30.91■■■□□ 2.54
EPCAM-201ENST00000263735 LAS1LQ9Y4W2 734 aaKnown RBP30.91■■■□□ 2.54
EPCAM-201ENST00000263735 ADAMTS7Q9UKP4 1686 aa30.9■■■□□ 2.54
EPCAM-201ENST00000263735 EXOSC9Q06265 439 aaKnown RBP30.9■■■□□ 2.54
EPCAM-201ENST00000263735 SCN11AQ9UI33 1791 aa30.89■■■□□ 2.54
EPCAM-201ENST00000263735 GOLGA6L2Q8N9W4 650 aaPredicted RBP30.88■■■□□ 2.53
EPCAM-201ENST00000263735 RAPGEF4Q8WZA2 1011 aa30.88■■■□□ 2.53
EPCAM-201ENST00000263735 MBIPQ9NS73 344 aa30.87■■■□□ 2.53
EPCAM-201ENST00000263735 MEGF6O75095 1541 aa30.87■■■□□ 2.53
EPCAM-201ENST00000263735 SIPA1L3O60292 1781 aaPredicted RBP30.86■■■□□ 2.53
EPCAM-201ENST00000263735 AKAP4Q5JQC9 854 aa30.85■■■□□ 2.53
EPCAM-201ENST00000263735 NWD2Q9ULI1 1742 aa30.85■■■□□ 2.53
EPCAM-201ENST00000263735 NRAPQ86VF7 1730 aa30.84■■■□□ 2.53
EPCAM-201ENST00000263735 RARSP54136 660 aaKnown RBP30.84■■■□□ 2.53
EPCAM-201ENST00000263735 WNK3Q9BYP7 1800 aa30.84■■■□□ 2.53
EPCAM-201ENST00000263735 OVOS2A0A0G2JMS6 1433 aa30.84■■■□□ 2.53
EPCAM-201ENST00000263735 TATP17735 454 aaPredicted RBP30.84■■■□□ 2.53
EPCAM-201ENST00000263735 ZNF530Q6P9A1 599 aaPredicted RBP30.84■■■□□ 2.53
EPCAM-201ENST00000263735 KDM3BQ7LBC6 1761 aa30.84■■■□□ 2.53
EPCAM-201ENST00000263735 CHL1O00533 1208 aa30.83■■■□□ 2.53
EPCAM-201ENST00000263735 CEMIPQ8WUJ3 1361 aa30.83■■■□□ 2.53
EPCAM-201ENST00000263735 TOM1L2Q6ZVM7 507 aa30.82■■■□□ 2.52
EPCAM-201ENST00000263735 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP30.82■■■□□ 2.521e-7■■□□□ 12.1
EPCAM-201ENST00000263735 BCAR3O75815 825 aa30.81■■■□□ 2.52
EPCAM-201ENST00000263735 ZNF428Q96B54 188 aa30.81■■■□□ 2.52
EPCAM-201ENST00000263735 C1orf141Q5JVX7 400 aa30.81■■■□□ 2.52
EPCAM-201ENST00000263735 SHANK3Q9BYB0 1731 aa30.81■■■□□ 2.52
EPCAM-201ENST00000263735 PLIN1O60240 522 aa30.8■■■□□ 2.52
EPCAM-201ENST00000263735 IL17REQ8NFR9 667 aa30.8■■■□□ 2.52
EPCAM-201ENST00000263735 CARD10Q9BWT7 1032 aa30.8■■■□□ 2.52
EPCAM-201ENST00000263735 EVA1CP58658 441 aa30.78■■■□□ 2.52
EPCAM-201ENST00000263735 BTG4Q9NY30 223 aa30.78■■■□□ 2.52
EPCAM-201ENST00000263735 SPG7Q9UQ90 795 aa30.78■■■□□ 2.52
EPCAM-201ENST00000263735 STRN4Q9NRL3 753 aa30.77■■■□□ 2.52
EPCAM-201ENST00000263735 BABAM1Q9NWV8 329 aa30.77■■■□□ 2.52
EPCAM-201ENST00000263735 CACNA1FO60840 1977 aa30.76■■■□□ 2.52
EPCAM-201ENST00000263735 LARP1Q6PKG0 1096 aaKnown RBP30.75■■■□□ 2.51
EPCAM-201ENST00000263735 JCADQ9P266 1359 aa30.75■■■□□ 2.51
EPCAM-201ENST00000263735 ALDH1L2Q3SY69 923 aa30.73■■■□□ 2.51
EPCAM-201ENST00000263735 TSPYL4Q9UJ04 414 aa30.73■■■□□ 2.51
EPCAM-201ENST00000263735 PPP4R2Q9NY27 417 aa30.73■■■□□ 2.51
EPCAM-201ENST00000263735 TAF7Q15545 349 aaPredicted RBP30.72■■■□□ 2.51
EPCAM-201ENST00000263735 TWISTNBQ3B726 338 aaPredicted RBP30.72■■■□□ 2.51
EPCAM-201ENST00000263735 VAMP4O75379 141 aa30.71■■■□□ 2.51
EPCAM-201ENST00000263735 SMC4Q9NTJ3 1288 aa30.7■■■□□ 2.51
EPCAM-201ENST00000263735 RNMTO43148 476 aaKnown RBP30.7■■■□□ 2.5
EPCAM-201ENST00000263735 TSPYL6Q8N831 410 aa30.7■■■□□ 2.5
EPCAM-201ENST00000263735 C8orf58Q8NAV2 365 aa30.7■■■□□ 2.5
EPCAM-201ENST00000263735 SSH1Q8WYL5 1049 aa30.7■■■□□ 2.5
EPCAM-201ENST00000263735 LGR6Q9HBX8 967 aa30.7■■■□□ 2.5
EPCAM-201ENST00000263735 CANXP27824 592 aaKnown RBP30.69■■■□□ 2.5
EPCAM-201ENST00000263735 MPRIPQ6WCQ1 1025 aa30.69■■■□□ 2.5
EPCAM-201ENST00000263735 IFNL2Q8IZJ0 200 aa30.69■■■□□ 2.5
EPCAM-201ENST00000263735 BCL2L13Q9BXK5 485 aa30.69■■■□□ 2.5
EPCAM-201ENST00000263735 IL2RBP14784 551 aa30.68■■■□□ 2.5
EPCAM-201ENST00000263735 PHKG2P15735 406 aa30.68■■■□□ 2.5
EPCAM-201ENST00000263735 TEFQ10587 303 aa30.67■■■□□ 2.5
EPCAM-201ENST00000263735 PDE3AQ14432 1141 aa30.67■■■□□ 2.5
EPCAM-201ENST00000263735 ADAMTS2O95450 1211 aa30.67■■■□□ 2.5
EPCAM-201ENST00000263735 C20orf194Q5TEA3 1177 aa30.67■■■□□ 2.5
EPCAM-201ENST00000263735 MRC1P22897 1456 aa30.66■■■□□ 2.5
EPCAM-201ENST00000263735 BRPF1P55201 1214 aaPredicted RBP30.66■■■□□ 2.5
EPCAM-201ENST00000263735 MIS18AQ9NYP9 233 aa30.66■■■□□ 2.5
EPCAM-201ENST00000263735 KIF16BQ96L93 1317 aa30.65■■■□□ 2.5
EPCAM-201ENST00000263735 KDM6AO15550 1401 aaPredicted RBP30.65■■■□□ 2.5
EPCAM-201ENST00000263735 EXOC6Q8TAG9 804 aa30.65■■■□□ 2.5
EPCAM-201ENST00000263735 FRAT1Q92837 279 aaPredicted RBP30.65■■■□□ 2.5
EPCAM-201ENST00000263735 SLIT2O94813 1529 aa30.65■■■□□ 2.5
EPCAM-201ENST00000263735 PCDH11XQ9BZA7 1347 aa30.65■■■□□ 2.5
EPCAM-201ENST00000263735 PCDH11YQ9BZA8 1340 aa30.65■■■□□ 2.5
EPCAM-201ENST00000263735 NUTM2BA6NNL0 878 aaPredicted RBP30.64■■■□□ 2.5
EPCAM-201ENST00000263735 NUTM2EB1AL46 878 aaPredicted RBP30.64■■■□□ 2.5
EPCAM-201ENST00000263735 NUTM2AQ8IVF1 878 aaPredicted RBP30.64■■■□□ 2.5
EPCAM-201ENST00000263735 ELL2O00472 640 aaPredicted RBP30.64■■■□□ 2.5
EPCAM-201ENST00000263735 HSP90AB1P08238 724 aaKnown RBP30.63■■■□□ 2.49
EPCAM-201ENST00000263735 CRBNQ96SW2 442 aa30.63■■■□□ 2.49
EPCAM-201ENST00000263735 CYP27B1O15528 508 aa30.62■■■□□ 2.49
EPCAM-201ENST00000263735 ZCRB1Q8TBF4 217 aaKnown RBP30.62■■■□□ 2.49
EPCAM-201ENST00000263735 DISP2A7MBM2 1401 aa30.62■■■□□ 2.49
EPCAM-201ENST00000263735 SOS1Q07889 1333 aaPredicted RBP30.62■■■□□ 2.49
EPCAM-201ENST00000263735 SPATA31A6Q5VVP1 1343 aa30.62■■■□□ 2.49
EPCAM-201ENST00000263735 TNKS1BP1Q9C0C2 1729 aaKnown RBP30.62■■■□□ 2.49
EPCAM-201ENST00000263735 ZKSCAN2Q63HK3 967 aa30.61■■■□□ 2.49
EPCAM-201ENST00000263735 KRT24Q2M2I5 525 aa30.6■■■□□ 2.49
EPCAM-201ENST00000263735 DCAF5Q96JK2 942 aa30.59■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms