RNA–Protein interactions for RNA: ENST00000263212.9

PPM1F-201, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1F, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PPM1F, Length 5,143 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1F-201ENST00000263212 TTC39AQ5SRH9 613 aa17.43■□□□□ 0.38
PPM1F-201ENST00000263212 IL16Q14005 1332 aa17.43■□□□□ 0.38
PPM1F-201ENST00000263212 CASTP20810 708 aaKnown RBP17.42■□□□□ 0.38
PPM1F-201ENST00000263212 NUDT16Q96DE0 195 aaKnown RBP17.42■□□□□ 0.38
PPM1F-201ENST00000263212 TRIM34Q9BYJ4 488 aa17.42■□□□□ 0.38
PPM1F-201ENST00000263212 CTNNA3Q9UI47 895 aa17.42■□□□□ 0.38
PPM1F-201ENST00000263212 OFD1O75665 1012 aa17.42■□□□□ 0.38
PPM1F-201ENST00000263212 TRIM22Q8IYM9 498 aa17.42■□□□□ 0.38
PPM1F-201ENST00000263212 PDCL2Q8N4E4 241 aa17.42■□□□□ 0.38
PPM1F-201ENST00000263212 SH2B1Q9NRF2 756 aaPredicted RBP17.42■□□□□ 0.38
PPM1F-201ENST00000263212 PEG3Q9GZU2 1588 aa17.42■□□□□ 0.38
PPM1F-201ENST00000263212 RALGAPBQ86X10 1494 aa17.41■□□□□ 0.38
PPM1F-201ENST00000263212 ESCO1Q5FWF5 840 aa17.41■□□□□ 0.38
PPM1F-201ENST00000263212 SMARCA5O60264 1052 aaPredicted RBP17.41■□□□□ 0.38
PPM1F-201ENST00000263212 HDAC1Q13547 482 aaPredicted RBP17.41■□□□□ 0.38
PPM1F-201ENST00000263212 SCAND2PQ9GZW5 306 aaPredicted RBP17.41■□□□□ 0.38
PPM1F-201ENST00000263212 GNAT3A8MTJ3 354 aa17.41■□□□□ 0.38
PPM1F-201ENST00000263212 RAD21O60216 631 aa17.41■□□□□ 0.38
PPM1F-201ENST00000263212 NUTM1Q86Y26 1132 aa17.41■□□□□ 0.38
PPM1F-201ENST00000263212 NCBP3Q53F19 620 aaKnown RBP17.4■□□□□ 0.38
PPM1F-201ENST00000263212 TTLL5Q6EMB2 1281 aa17.4■□□□□ 0.38
PPM1F-201ENST00000263212 TBC1D9Q6ZT07 1266 aa17.4■□□□□ 0.38
PPM1F-201ENST00000263212 PPFIBP1Q86W92 1011 aa17.4■□□□□ 0.38
PPM1F-201ENST00000263212 ADGRF5Q8IZF2 1346 aa17.4■□□□□ 0.38
PPM1F-201ENST00000263212 MCM5P33992 734 aa17.4■□□□□ 0.38
PPM1F-201ENST00000263212 KIF6Q6ZMV9 814 aa17.4■□□□□ 0.38
PPM1F-201ENST00000263212 PTPRKQ15262 1439 aa17.4■□□□□ 0.38
PPM1F-201ENST00000263212 CDKL5O76039 1030 aa17.4■□□□□ 0.38
PPM1F-201ENST00000263212 FILIP1Q7Z7B0 1213 aa17.4■□□□□ 0.38
PPM1F-201ENST00000263212 MAGEC2Q9UBF1 373 aaPredicted RBP17.4■□□□□ 0.38
PPM1F-201ENST00000263212 KIF2AO00139 706 aaPredicted RBP17.39■□□□□ 0.38
PPM1F-201ENST00000263212 KDM4AO75164 1064 aa17.39■□□□□ 0.37
PPM1F-201ENST00000263212 KLHL40Q2TBA0 621 aa17.39■□□□□ 0.37
PPM1F-201ENST00000263212 ZSCAN25Q6NSZ9 544 aa17.39■□□□□ 0.37
PPM1F-201ENST00000263212 SMTNL1A8MU46 457 aa17.39■□□□□ 0.37
PPM1F-201ENST00000263212 FYB1O15117 783 aa17.39■□□□□ 0.37
PPM1F-201ENST00000263212 LEKR1Q6ZMV7 388 aa17.39■□□□□ 0.37
PPM1F-201ENST00000263212 TCEAL9Q9UHQ7 104 aa17.39■□□□□ 0.37
PPM1F-201ENST00000263212 MCM10Q7L590 875 aa17.38■□□□□ 0.37
PPM1F-201ENST00000263212 CCDC83Q8IWF9 413 aa17.38■□□□□ 0.37
PPM1F-201ENST00000263212 PARD3Q8TEW0 1356 aa17.38■□□□□ 0.37
PPM1F-201ENST00000263212 BAG4O95429 457 aaKnown RBP17.38■□□□□ 0.37
PPM1F-201ENST00000263212 PTPRCP08575 1304 aa17.38■□□□□ 0.37
PPM1F-201ENST00000263212 RRP12Q5JTH9 1297 aaKnown RBP17.38■□□□□ 0.37
PPM1F-201ENST00000263212 NACAP1Q9BZK3 213 aa17.38■□□□□ 0.37
PPM1F-201ENST00000263212 THOC2Q8NI27 1593 aaKnown RBP17.38■□□□□ 0.37
PPM1F-201ENST00000263212 BRPF1P55201 1214 aaPredicted RBP17.37■□□□□ 0.37
PPM1F-201ENST00000263212 THEMISQ8N1K5 641 aaPredicted RBP17.37■□□□□ 0.37
PPM1F-201ENST00000263212 ZNHIT6Q9NWK9 470 aaKnown RBP17.37■□□□□ 0.37
PPM1F-201ENST00000263212 BTBD11A6QL63 1104 aa17.37■□□□□ 0.37
PPM1F-201ENST00000263212 SLC3A2P08195 630 aaKnown RBP17.37■□□□□ 0.37
PPM1F-201ENST00000263212 CNNM1Q9NRU3 951 aa17.37■□□□□ 0.37
PPM1F-201ENST00000263212 FAM135AQ9P2D6 1515 aa17.37■□□□□ 0.37
PPM1F-201ENST00000263212 EPS15P42566 896 aa17.37■□□□□ 0.37
PPM1F-201ENST00000263212 DCTN1Q14203 1278 aa17.37■□□□□ 0.37
PPM1F-201ENST00000263212 RBM33Q96EV2 1170 aaKnown RBP17.37■□□□□ 0.37
PPM1F-201ENST00000263212 LIMCH1Q9UPQ0 1083 aa17.37■□□□□ 0.37
PPM1F-201ENST00000263212 ERLIN1O75477 346 aa17.37■□□□□ 0.37
PPM1F-201ENST00000263212 RAPGEF3O95398 923 aa17.36■□□□□ 0.37
PPM1F-201ENST00000263212 FERMT3Q86UX7 667 aa17.36■□□□□ 0.37
PPM1F-201ENST00000263212 CEP126Q9P2H0 1117 aa17.36■□□□□ 0.37
PPM1F-201ENST00000263212 SPG7Q9UQ90 795 aa17.36■□□□□ 0.37
PPM1F-201ENST00000263212 PRPF40BQ6NWY9 871 aaKnown RBP17.35■□□□□ 0.37
PPM1F-201ENST00000263212 ARHGAP45Q92619 1136 aa17.35■□□□□ 0.37
PPM1F-201ENST00000263212 LAMC3Q9Y6N6 1575 aa17.35■□□□□ 0.37
PPM1F-201ENST00000263212 C8orf34Q49A92 452 aa17.35■□□□□ 0.37
PPM1F-201ENST00000263212 BICRAQ9NZM4 1560 aa17.35■□□□□ 0.37
PPM1F-201ENST00000263212 CABP4P57796 275 aa17.35■□□□□ 0.37
PPM1F-201ENST00000263212 NUCB1Q02818 461 aa17.35■□□□□ 0.37
PPM1F-201ENST00000263212 CCDC57Q2TAC2 916 aa17.35■□□□□ 0.37
PPM1F-201ENST00000263212 MIS18AQ9NYP9 233 aa17.35■□□□□ 0.37
PPM1F-201ENST00000263212 PCDHB15Q9Y5E8 787 aa17.35■□□□□ 0.37
PPM1F-201ENST00000263212 PDCL3Q9H2J4 239 aa17.34■□□□□ 0.37
PPM1F-201ENST00000263212 CCDC69A6NI79 296 aa17.34■□□□□ 0.37
PPM1F-201ENST00000263212 EIF3JO75822 258 aaKnown RBP17.34■□□□□ 0.37
PPM1F-201ENST00000263212 XPCQ01831 940 aaPredicted RBP17.34■□□□□ 0.37
PPM1F-201ENST00000263212 MYL6BP14649 208 aa17.34■□□□□ 0.37
PPM1F-201ENST00000263212 UGGT2Q9NYU1 1516 aa17.34■□□□□ 0.37
PPM1F-201ENST00000263212 H0YHG0 523 aa17.34■□□□□ 0.37
PPM1F-201ENST00000263212 STIM1Q13586 685 aa17.34■□□□□ 0.37
PPM1F-201ENST00000263212 ANO10Q9NW15 660 aa17.34■□□□□ 0.37
PPM1F-201ENST00000263212 GRIN2AQ12879 1464 aa17.33■□□□□ 0.37
PPM1F-201ENST00000263212 TAF7Q15545 349 aaPredicted RBP17.33■□□□□ 0.37
PPM1F-201ENST00000263212 TTC22Q5TAA0 569 aa17.33■□□□□ 0.36
PPM1F-201ENST00000263212 CCDC43Q96MW1 224 aaKnown RBP17.33■□□□□ 0.36
PPM1F-201ENST00000263212 GNL3LQ9NVN8 582 aaKnown RBP17.33■□□□□ 0.36
PPM1F-201ENST00000263212 DDX11Q96FC9 970 aa17.33■□□□□ 0.36
PPM1F-201ENST00000263212 C14orf93Q9H972 538 aaKnown RBP17.33■□□□□ 0.36
PPM1F-201ENST00000263212 MYO6Q9UM54 1294 aa17.33■□□□□ 0.36
PPM1F-201ENST00000263212 EMILIN1Q9Y6C2 1016 aa17.33■□□□□ 0.36
PPM1F-201ENST00000263212 PTPN14Q15678 1187 aa17.33■□□□□ 0.36
PPM1F-201ENST00000263212 UBXN4Q92575 508 aa17.33■□□□□ 0.36
PPM1F-201ENST00000263212 NOL7Q9UMY1 257 aaKnown RBP17.33■□□□□ 0.36
PPM1F-201ENST00000263212 NUP160Q12769 1436 aa17.32■□□□□ 0.36
PPM1F-201ENST00000263212 FKBP4Q02790 459 aaKnown RBP eCLIP17.32■□□□□ 0.36
PPM1F-201ENST00000263212 CAMK4Q16566 473 aa17.32■□□□□ 0.36
PPM1F-201ENST00000263212 NME9Q86XW9 330 aa17.32■□□□□ 0.36
PPM1F-201ENST00000263212 U3KPZ7 1027 aaPredicted RBP17.32■□□□□ 0.36
PPM1F-201ENST00000263212 ASXL1Q8IXJ9 1541 aa17.32■□□□□ 0.36
PPM1F-201ENST00000263212 AXDND1Q5T1B0 1012 aaPredicted RBP17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms