RNA–Protein interactions for RNA: ENST00000263102.6

CCDC6-201, Transcript of coiled-coil domain containing 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC6, Length 5,811 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC6-201ENST00000263102 TNNT1P13805 278 aa17.49■□□□□ 0.39
CCDC6-201ENST00000263102 HMGB2P26583 209 aaKnown RBP17.49■□□□□ 0.39
CCDC6-201ENST00000263102 EXOSC9Q06265 439 aaKnown RBP17.49■□□□□ 0.39
CCDC6-201ENST00000263102 RRS1Q15050 365 aaKnown RBP17.49■□□□□ 0.39
CCDC6-201ENST00000263102 CABP1Q9NZU7 370 aa17.48■□□□□ 0.39
CCDC6-201ENST00000263102 CAVIN1Q6NZI2 390 aaKnown RBP17.48■□□□□ 0.39
CCDC6-201ENST00000263102 ZNF287Q9HBT7 754 aa17.48■□□□□ 0.39
CCDC6-201ENST00000263102 TXLNBQ8N3L3 684 aa17.48■□□□□ 0.39
CCDC6-201ENST00000263102 NOB1Q9ULX3 412 aaKnown RBP17.48■□□□□ 0.39
CCDC6-201ENST00000263102 PRPF40AO75400 957 aaKnown RBP17.48■□□□□ 0.39
CCDC6-201ENST00000263102 TAF4BQ92750 862 aa17.48■□□□□ 0.39
CCDC6-201ENST00000263102 CDKL5O76039 1030 aa17.47■□□□□ 0.39
CCDC6-201ENST00000263102 LRRCC1Q9C099 1032 aa17.47■□□□□ 0.39
CCDC6-201ENST00000263102 ZMYND15Q9H091 742 aa17.47■□□□□ 0.39
CCDC6-201ENST00000263102 KIF7Q2M1P5 1343 aa17.47■□□□□ 0.39
CCDC6-201ENST00000263102 CCDC88BA6NC98 1476 aa17.47■□□□□ 0.39
CCDC6-201ENST00000263102 ZNF444Q8N0Y2 327 aaPredicted RBP17.47■□□□□ 0.39
CCDC6-201ENST00000263102 TSR2Q969E8 191 aaKnown RBP17.47■□□□□ 0.39
CCDC6-201ENST00000263102 CCP110O43303 1012 aa17.46■□□□□ 0.39
CCDC6-201ENST00000263102 PUS7Q96PZ0 661 aaKnown RBP17.46■□□□□ 0.39
CCDC6-201ENST00000263102 TSPY26PQ9H489 355 aa17.46■□□□□ 0.39
CCDC6-201ENST00000263102 PDCP20941 246 aa17.46■□□□□ 0.39
CCDC6-201ENST00000263102 RFX1P22670 979 aa17.46■□□□□ 0.39
CCDC6-201ENST00000263102 CFAP70Q5T0N1 1121 aa17.46■□□□□ 0.39
CCDC6-201ENST00000263102 CCDC113Q9H0I3 377 aa17.46■□□□□ 0.39
CCDC6-201ENST00000263102 CCDC39Q9UFE4 941 aa17.46■□□□□ 0.39
CCDC6-201ENST00000263102 SAMM50Q9Y512 469 aa17.46■□□□□ 0.39
CCDC6-201ENST00000263102 CETN2P41208 172 aa17.46■□□□□ 0.39
CCDC6-201ENST00000263102 KIAA1328Q86T90 577 aa17.46■□□□□ 0.39
CCDC6-201ENST00000263102 CWC27Q6UX04 472 aaKnown RBP17.46■□□□□ 0.38
CCDC6-201ENST00000263102 AFAP1Q8N556 730 aa17.46■□□□□ 0.38
CCDC6-201ENST00000263102 BCAR3O75815 825 aa17.45■□□□□ 0.38
CCDC6-201ENST00000263102 RANBP6O60518 1105 aaKnown RBP17.45■□□□□ 0.38
CCDC6-201ENST00000263102 EHMT1Q9H9B1 1298 aa17.45■□□□□ 0.38
CCDC6-201ENST00000263102 PUF60Q9UHX1 559 aaKnown RBP17.45■□□□□ 0.38
CCDC6-201ENST00000263102 ARHGAP5Q13017 1502 aa17.45■□□□□ 0.38
CCDC6-201ENST00000263102 MPNDQ8N594 471 aa17.45■□□□□ 0.38
CCDC6-201ENST00000263102 LETM1O95202 739 aaPredicted RBP17.45■□□□□ 0.38
CCDC6-201ENST00000263102 SRGAP3O43295 1099 aa17.44■□□□□ 0.38
CCDC6-201ENST00000263102 RABEP1Q15276 862 aa17.44■□□□□ 0.38
CCDC6-201ENST00000263102 MYO1BO43795 1136 aa17.44■□□□□ 0.38
CCDC6-201ENST00000263102 TNMDQ9H2S6 317 aa17.44■□□□□ 0.38
CCDC6-201ENST00000263102 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.44■□□□□ 0.38
CCDC6-201ENST00000263102 CCDC91Q7Z6B0 441 aa17.44■□□□□ 0.38
CCDC6-201ENST00000263102 IFIT1P09914 478 aaKnown RBP17.43■□□□□ 0.38
CCDC6-201ENST00000263102 DNA2P51530 1060 aa17.43■□□□□ 0.38
CCDC6-201ENST00000263102 USHBP1Q8N6Y0 703 aa17.43■□□□□ 0.38
CCDC6-201ENST00000263102 IMMTQ16891 758 aaKnown RBP17.43■□□□□ 0.38
CCDC6-201ENST00000263102 CCDC82Q8N4S0 544 aa17.43■□□□□ 0.38
CCDC6-201ENST00000263102 CTNNA2P26232 953 aa17.43■□□□□ 0.38
CCDC6-201ENST00000263102 TRMT112Q9UI30 125 aaKnown RBP17.43■□□□□ 0.38
CCDC6-201ENST00000263102 CNTLNQ9NXG0 1405 aa17.43■□□□□ 0.38
CCDC6-201ENST00000263102 SPTY2D1Q68D10 685 aaPredicted RBP17.43■□□□□ 0.38
CCDC6-201ENST00000263102 TCP11L2Q8N4U5 519 aa17.43■□□□□ 0.38
CCDC6-201ENST00000263102 IL1RAPL2Q9NP60 686 aa17.43■□□□□ 0.38
CCDC6-201ENST00000263102 SSX2IPQ9Y2D8 614 aa17.43■□□□□ 0.38
CCDC6-201ENST00000263102 MYD88Q99836 296 aa17.43■□□□□ 0.38
CCDC6-201ENST00000263102 PRKRIP1Q9H875 184 aaPredicted RBP17.43■□□□□ 0.38
CCDC6-201ENST00000263102 VAT1LQ9HCJ6 419 aa17.43■□□□□ 0.38
CCDC6-201ENST00000263102 CTNNA3Q9UI47 895 aa17.43■□□□□ 0.38
CCDC6-201ENST00000263102 ANKRD1Q15327 319 aa17.42■□□□□ 0.38
CCDC6-201ENST00000263102 DDX11Q96FC9 970 aa17.42■□□□□ 0.38
CCDC6-201ENST00000263102 MIS18AQ9NYP9 233 aa17.42■□□□□ 0.38
CCDC6-201ENST00000263102 CWC15Q9P013 229 aaKnown RBP17.42■□□□□ 0.38
CCDC6-201ENST00000263102 ZNF644Q9H582 1327 aaPredicted RBP17.42■□□□□ 0.38
CCDC6-201ENST00000263102 CCT4P50991 539 aaKnown RBP17.42■□□□□ 0.38
CCDC6-201ENST00000263102 LEKR1Q6ZMV7 388 aa17.42■□□□□ 0.38
CCDC6-201ENST00000263102 RAD54L2Q9Y4B4 1467 aa17.42■□□□□ 0.38
CCDC6-201ENST00000263102 GOLGA6L7A0A1B0GV03 622 aa17.42■□□□□ 0.38
CCDC6-201ENST00000263102 TSG101Q99816 390 aa17.41■□□□□ 0.38
CCDC6-201ENST00000263102 CADPSQ9ULU8 1353 aa17.41■□□□□ 0.38
CCDC6-201ENST00000263102 RFC4P35249 363 aa17.41■□□□□ 0.38
CCDC6-201ENST00000263102 NASPP49321 788 aaPredicted RBP17.41■□□□□ 0.38
CCDC6-201ENST00000263102 RBM26Q5T8P6 1007 aaKnown RBP17.41■□□□□ 0.38
CCDC6-201ENST00000263102 GOPCQ9HD26 462 aa17.41■□□□□ 0.38
CCDC6-201ENST00000263102 GPTP24298 496 aa17.41■□□□□ 0.38
CCDC6-201ENST00000263102 PDRG1Q9NUG6 133 aa17.41■□□□□ 0.38
CCDC6-201ENST00000263102 LARP1BQ659C4 914 aaKnown RBP17.41■□□□□ 0.38
CCDC6-201ENST00000263102 WASF1Q92558 559 aa17.41■□□□□ 0.38
CCDC6-201ENST00000263102 JAKMIP1Q96N16 626 aaKnown RBP17.41■□□□□ 0.38
CCDC6-201ENST00000263102 STAMBPO95630 424 aa17.41■□□□□ 0.38
CCDC6-201ENST00000263102 MPHOSPH6Q99547 160 aaKnown RBP17.41■□□□□ 0.38
CCDC6-201ENST00000263102 USP8P40818 1118 aa17.4■□□□□ 0.38
CCDC6-201ENST00000263102 BICD1Q96G01 975 aa17.4■□□□□ 0.38
CCDC6-201ENST00000263102 NUTM1Q86Y26 1132 aa17.4■□□□□ 0.38
CCDC6-201ENST00000263102 CABP5Q9NP86 173 aa17.4■□□□□ 0.38
CCDC6-201ENST00000263102 KIAA0754O94854 1291 aa17.4■□□□□ 0.38
CCDC6-201ENST00000263102 LARP1Q6PKG0 1096 aaKnown RBP17.4■□□□□ 0.38
CCDC6-201ENST00000263102 RTEL1-TNFRSF6BF6WH68 1400 aa17.4■□□□□ 0.38
CCDC6-201ENST00000263102 GSTTP1A0A1W2PQM5 241 aa17.4■□□□□ 0.38
CCDC6-201ENST00000263102 ARL1P40616 181 aaPredicted RBP17.39■□□□□ 0.38
CCDC6-201ENST00000263102 CCDC178Q5BJE1 867 aa17.39■□□□□ 0.38
CCDC6-201ENST00000263102 FAM43AQ8N2R8 423 aa17.39■□□□□ 0.38
CCDC6-201ENST00000263102 LRSAM1Q6UWE0 723 aa17.39■□□□□ 0.37
CCDC6-201ENST00000263102 CKAP2LQ8IYA6 745 aa17.39■□□□□ 0.37
CCDC6-201ENST00000263102 PLS1Q14651 629 aa17.39■□□□□ 0.37
CCDC6-201ENST00000263102 BLOC1S2Q6QNY1 142 aa17.39■□□□□ 0.37
CCDC6-201ENST00000263102 RGS22Q8NE09 1264 aa17.39■□□□□ 0.37
CCDC6-201ENST00000263102 F8W031 263 aaPredicted RBP17.39■□□□□ 0.37
CCDC6-201ENST00000263102 KIF20AO95235 890 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms