RNA–Protein interactions for RNA: ENST00000262965.9

TCF3-201, Transcript of transcription factor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCF3, Length 4,451 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-201ENST00000262965 SLC26A8Q96RN1 970 aa16.11■□□□□ 0.17
TCF3-201ENST00000262965 GPRASP1Q5JY77 1395 aa16.11■□□□□ 0.17
TCF3-201ENST00000262965 TSHZ3Q63HK5 1081 aa16.1■□□□□ 0.17
TCF3-201ENST00000262965 ZNF530Q6P9A1 599 aaPredicted RBP16.1■□□□□ 0.17
TCF3-201ENST00000262965 DISP1Q96F81 1524 aa16.1■□□□□ 0.17
TCF3-201ENST00000262965 MAPK8IP2Q13387 824 aaPredicted RBP16.1■□□□□ 0.17
TCF3-201ENST00000262965 AEBP1Q8IUX7 1158 aa16.1■□□□□ 0.17
TCF3-201ENST00000262965 RUFY1Q96T51 708 aa16.1■□□□□ 0.17
TCF3-201ENST00000262965 TBC1D9Q6ZT07 1266 aa16.1■□□□□ 0.17
TCF3-201ENST00000262965 RBM27Q9P2N5 1060 aaKnown RBP16.09■□□□□ 0.17
TCF3-201ENST00000262965 TNNQ9UQP3 1299 aa16.09■□□□□ 0.17
TCF3-201ENST00000262965 WAPLQ7Z5K2 1190 aa16.09■□□□□ 0.17
TCF3-201ENST00000262965 TARBP1Q13395 1621 aaKnown RBP16.09■□□□□ 0.17
TCF3-201ENST00000262965 HIP1O00291 1037 aa16.09■□□□□ 0.17
TCF3-201ENST00000262965 FBLN1P23142 703 aa16.09■□□□□ 0.17
TCF3-201ENST00000262965 EMILIN1Q9Y6C2 1016 aa16.09■□□□□ 0.17
TCF3-201ENST00000262965 PLCH2O75038 1416 aa16.09■□□□□ 0.17
TCF3-201ENST00000262965 ZNF396Q96N95 335 aaPredicted RBP16.09■□□□□ 0.17
TCF3-201ENST00000262965 DISP3Q9P2K9 1392 aa16.08■□□□□ 0.17
TCF3-201ENST00000262965 XRCC6P12956 609 aaKnown RBP eCLIP16.08■□□□□ 0.173e-6■■■□□ 19
TCF3-201ENST00000262965 MX1P20591 662 aa16.08■□□□□ 0.17
TCF3-201ENST00000262965 ERC1Q8IUD2 1116 aa16.08■□□□□ 0.17
TCF3-201ENST00000262965 ADGRF5Q8IZF2 1346 aa16.08■□□□□ 0.17
TCF3-201ENST00000262965 SAMD1Q6SPF0 538 aaPredicted RBP16.08■□□□□ 0.16
TCF3-201ENST00000262965 CBX1P83916 185 aa16.08■□□□□ 0.16
TCF3-201ENST00000262965 ESCO1Q5FWF5 840 aa16.08■□□□□ 0.16
TCF3-201ENST00000262965 CAGE1Q8TC20 777 aa16.08■□□□□ 0.16
TCF3-201ENST00000262965 PLEKHO1Q53GL0 409 aaPredicted RBP16.08■□□□□ 0.16
TCF3-201ENST00000262965 RPRD2Q5VT52 1461 aaKnown RBP16.07■□□□□ 0.16
TCF3-201ENST00000262965 BAG4O95429 457 aaKnown RBP16.07■□□□□ 0.16
TCF3-201ENST00000262965 RPGRIP1LQ68CZ1 1315 aa16.07■□□□□ 0.16
TCF3-201ENST00000262965 C8orf34Q49A92 452 aa16.07■□□□□ 0.16
TCF3-201ENST00000262965 PRPF40BQ6NWY9 871 aaKnown RBP16.07■□□□□ 0.16
TCF3-201ENST00000262965 PDCL2Q8N4E4 241 aa16.07■□□□□ 0.16
TCF3-201ENST00000262965 CCDC85AQ96PX6 553 aaPredicted RBP16.07■□□□□ 0.16
TCF3-201ENST00000262965 FKBP4Q02790 459 aaKnown RBP eCLIP16.06■□□□□ 0.16
TCF3-201ENST00000262965 NOL10Q9BSC4 688 aaKnown RBP16.06■□□□□ 0.16
TCF3-201ENST00000262965 ASXL2Q76L83 1435 aa16.06■□□□□ 0.16
TCF3-201ENST00000262965 CFAP43Q8NDM7 1665 aa16.06■□□□□ 0.16
TCF3-201ENST00000262965 CCDC66A2RUB6 948 aa16.06■□□□□ 0.16
TCF3-201ENST00000262965 RBM42Q9BTD8 480 aaKnown RBP16.06■□□□□ 0.16
TCF3-201ENST00000262965 MAP3K11Q16584 847 aa16.06■□□□□ 0.16
TCF3-201ENST00000262965 AMOTL1Q8IY63 956 aa16.06■□□□□ 0.16
TCF3-201ENST00000262965 CKAP2LQ8IYA6 745 aa16.06■□□□□ 0.16
TCF3-201ENST00000262965 MAPKBP1O60336 1514 aa16.06■□□□□ 0.16
TCF3-201ENST00000262965 ERICH4A6NGS2 130 aa16.06■□□□□ 0.16
TCF3-201ENST00000262965 OFD1O75665 1012 aa16.06■□□□□ 0.16
TCF3-201ENST00000262965 NME9Q86XW9 330 aa16.06■□□□□ 0.16
TCF3-201ENST00000262965 ACBD3Q9H3P7 528 aa16.06■□□□□ 0.16
TCF3-201ENST00000262965 ANKRD1Q15327 319 aa16.05■□□□□ 0.16
TCF3-201ENST00000262965 RTEL1-TNFRSF6BF6WH68 1400 aa16.05■□□□□ 0.16
TCF3-201ENST00000262965 SEC24BO95487 1268 aa16.05■□□□□ 0.16
TCF3-201ENST00000262965 DENND4BO75064 1496 aaPredicted RBP16.05■□□□□ 0.16
TCF3-201ENST00000262965 TBC1D2BQ9UPU7 963 aa16.04■□□□□ 0.16
TCF3-201ENST00000262965 ZNF692Q9BU19 519 aaPredicted RBP16.04■□□□□ 0.16
TCF3-201ENST00000262965 BOLA2Q9H3K6 86 aa16.04■□□□□ 0.16
TCF3-201ENST00000262965 CEP57L1Q8IYX8 460 aa16.04■□□□□ 0.16
TCF3-201ENST00000262965 TFIP11Q9UBB9 837 aaKnown RBP16.04■□□□□ 0.16
TCF3-201ENST00000262965 PPP6R1Q9UPN7 881 aa16.04■□□□□ 0.16
TCF3-201ENST00000262965 ITSN2Q9NZM3 1697 aa16.03■□□□□ 0.16
TCF3-201ENST00000262965 FAM83GA6ND36 823 aa16.03■□□□□ 0.16
TCF3-201ENST00000262965 PPFIA3O75145 1194 aa16.03■□□□□ 0.16
TCF3-201ENST00000262965 CCDC61Q9Y6R9 512 aa16.03■□□□□ 0.16
TCF3-201ENST00000262965 XBP1P17861 261 aa16.03■□□□□ 0.16
TCF3-201ENST00000262965 SART3Q15020 963 aaKnown RBP16.03■□□□□ 0.16
TCF3-201ENST00000262965 SPG7Q9UQ90 795 aa16.03■□□□□ 0.16
TCF3-201ENST00000262965 BMP2KLQ5H9B9 411 aa16.03■□□□□ 0.16
TCF3-201ENST00000262965 AXDND1Q5T1B0 1012 aaPredicted RBP16.03■□□□□ 0.16
TCF3-201ENST00000262965 AK7Q96M32 723 aa16.03■□□□□ 0.16
TCF3-201ENST00000262965 ATAD2Q6PL18 1390 aa16.03■□□□□ 0.16
TCF3-201ENST00000262965 DHX29Q7Z478 1369 aaKnown RBP16.03■□□□□ 0.16
TCF3-201ENST00000262965 TCOF1Q13428 1488 aaKnown RBP16.03■□□□□ 0.16
TCF3-201ENST00000262965 GUCY1B3Q02153 619 aa16.02■□□□□ 0.16
TCF3-201ENST00000262965 ALDH1L2Q3SY69 923 aa16.02■□□□□ 0.16
TCF3-201ENST00000262965 H0YHG0 523 aa16.02■□□□□ 0.15
TCF3-201ENST00000262965 FILIP1LQ4L180 1135 aa16.02■□□□□ 0.15
TCF3-201ENST00000262965 NUDT16Q96DE0 195 aaKnown RBP16.02■□□□□ 0.15
TCF3-201ENST00000262965 RAB11FIP3O75154 756 aa16.02■□□□□ 0.15
TCF3-201ENST00000262965 ZSCAN31Q96LW9 406 aaPredicted RBP16.02■□□□□ 0.15
TCF3-201ENST00000262965 BRMS1Q9HCU9 246 aa16.02■□□□□ 0.15
TCF3-201ENST00000262965 WDR7Q9Y4E6 1490 aa16.01■□□□□ 0.15
TCF3-201ENST00000262965 JMYQ8N9B5 988 aa16.01■□□□□ 0.15
TCF3-201ENST00000262965 LRRFIP2Q9Y608 721 aaKnown RBP16.01■□□□□ 0.15
TCF3-201ENST00000262965 C16orf45Q96MC5 204 aaPredicted RBP16.01■□□□□ 0.15
TCF3-201ENST00000262965 SPINK5Q9NQ38 1064 aaPredicted RBP16.01■□□□□ 0.15
TCF3-201ENST00000262965 CFAP45Q9UL16 551 aa16.01■□□□□ 0.15
TCF3-201ENST00000262965 SAMD9Q5K651 1589 aa16.01■□□□□ 0.15
TCF3-201ENST00000262965 POGZQ7Z3K3 1410 aa16.01■□□□□ 0.15
TCF3-201ENST00000262965 RLBP1P12271 317 aa16.01■□□□□ 0.15
TCF3-201ENST00000262965 KIF1BPQ96EK5 621 aa16.01■□□□□ 0.15
TCF3-201ENST00000262965 CNNM1Q9NRU3 951 aa16.01■□□□□ 0.15
TCF3-201ENST00000262965 CCDC158Q5M9N0 1113 aa16■□□□□ 0.15
TCF3-201ENST00000262965 TTC39AQ5SRH9 613 aa16■□□□□ 0.15
TCF3-201ENST00000262965 THEMISQ8N1K5 641 aaPredicted RBP16■□□□□ 0.15
TCF3-201ENST00000262965 NUP133Q8WUM0 1156 aa16■□□□□ 0.15
TCF3-201ENST00000262965 TRMT1Q9NXH9 659 aaKnown RBP16■□□□□ 0.15
TCF3-201ENST00000262965 CCDC183Q5T5S1 534 aa16■□□□□ 0.15
TCF3-201ENST00000262965 ZNF830Q96NB3 372 aaPredicted RBP16■□□□□ 0.15
TCF3-201ENST00000262965 CCDC8Q9H0W5 538 aaPredicted RBP16■□□□□ 0.15
TCF3-201ENST00000262965 HCLS1P14317 486 aaPredicted RBP15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms