RNA–Protein interactions for RNA: ENST00000262812.8

COPE-201, Transcript of coatomer protein complex subunit epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPE, Length 1,141 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-201ENST00000262812 PLSCR1O15162 318 aa25.06■■□□□ 1.6
COPE-201ENST00000262812 MAP2P11137 1827 aaKnown RBP25.06■■□□□ 1.6
COPE-201ENST00000262812 ANKRD26Q9UPS8 1709 aa25.06■■□□□ 1.6
COPE-201ENST00000262812 R3HDM1Q15032 1099 aaKnown RBP25.05■■□□□ 1.6
COPE-201ENST00000262812 PARD3Q8TEW0 1356 aa25.05■■□□□ 1.6
COPE-201ENST00000262812 SYTL4Q96C24 671 aaPredicted RBP25.04■■□□□ 1.6
COPE-201ENST00000262812 PRIM1P49642 420 aaKnown RBP25.03■■□□□ 1.6
COPE-201ENST00000262812 MTHFSP49914 203 aa25.03■■□□□ 1.6
COPE-201ENST00000262812 NBPF14Q5TI25 921 aa25.02■■□□□ 1.6
COPE-201ENST00000262812 PROM2Q8N271 834 aa25.01■■□□□ 1.59
COPE-201ENST00000262812 SBF2Q86WG5 1849 aa24.99■■□□□ 1.59
COPE-201ENST00000262812 PCDH11XQ9BZA7 1347 aa24.99■■□□□ 1.59
COPE-201ENST00000262812 PCDH11YQ9BZA8 1340 aa24.99■■□□□ 1.59
COPE-201ENST00000262812 SPG7Q9UQ90 795 aa24.99■■□□□ 1.59
COPE-201ENST00000262812 CYP27B1O15528 508 aa24.98■■□□□ 1.59
COPE-201ENST00000262812 TXNRD1Q16881 649 aa24.98■■□□□ 1.59
COPE-201ENST00000262812 IGSF1Q8N6C5 1336 aa24.96■■□□□ 1.59
COPE-201ENST00000262812 IL13P35225 146 aa24.96■■□□□ 1.59
COPE-201ENST00000262812 NCAPD2Q15021 1401 aa24.95■■□□□ 1.59
COPE-201ENST00000262812 NPC1L1Q9UHC9 1359 aa24.95■■□□□ 1.59
COPE-201ENST00000262812 SULT6B1Q6IMI4 303 aa24.94■■□□□ 1.58
COPE-201ENST00000262812 AEBP1Q8IUX7 1158 aa24.94■■□□□ 1.58
COPE-201ENST00000262812 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.92■■□□□ 1.58
COPE-201ENST00000262812 NHSQ6T4R5 1651 aa24.91■■□□□ 1.58
COPE-201ENST00000262812 DIAPH1O60610 1272 aaKnown RBP24.9■■□□□ 1.58
COPE-201ENST00000262812 MPRIPQ6WCQ1 1025 aa24.9■■□□□ 1.58
COPE-201ENST00000262812 ANO8Q9HCE9 1232 aaPredicted RBP24.9■■□□□ 1.58
COPE-201ENST00000262812 SRCAPQ6ZRS2 3230 aa24.9■■□□□ 1.58
COPE-201ENST00000262812 PHKG2P15735 406 aa24.89■■□□□ 1.58
COPE-201ENST00000262812 PLEKHO1Q53GL0 409 aaPredicted RBP24.89■■□□□ 1.58
COPE-201ENST00000262812 IFNL2Q8IZJ0 200 aa24.89■■□□□ 1.58
COPE-201ENST00000262812 SHANK3Q9BYB0 1731 aa24.88■■□□□ 1.57
COPE-201ENST00000262812 RREB1Q92766 1687 aa24.88■■□□□ 1.57
COPE-201ENST00000262812 HMOX1P09601 288 aa24.87■■□□□ 1.57
COPE-201ENST00000262812 KCNQ4P56696 695 aa24.87■■□□□ 1.57
COPE-201ENST00000262812 NKX1-1Q15270 411 aaPredicted RBP24.87■■□□□ 1.57
COPE-201ENST00000262812 STK32BQ9NY57 414 aa24.87■■□□□ 1.57
COPE-201ENST00000262812 KAT6BQ8WYB5 2073 aa24.86■■□□□ 1.57
COPE-201ENST00000262812 LRRC4BQ9NT99 713 aa24.86■■□□□ 1.57
COPE-201ENST00000262812 NUP188Q5SRE5 1749 aa24.86■■□□□ 1.57
COPE-201ENST00000262812 ZEB1P37275 1124 aaPredicted RBP24.85■■□□□ 1.57
COPE-201ENST00000262812 AMOTQ4VCS5 1084 aa24.85■■□□□ 1.57
COPE-201ENST00000262812 ZNF530Q6P9A1 599 aaPredicted RBP24.85■■□□□ 1.57
COPE-201ENST00000262812 U2SURPO15042 1029 aaKnown RBP24.84■■□□□ 1.57
COPE-201ENST00000262812 DDX10Q13206 875 aaKnown RBP24.84■■□□□ 1.57
COPE-201ENST00000262812 PPP2R1AP30153 589 aa24.83■■□□□ 1.57
COPE-201ENST00000262812 SLC15A2Q16348 729 aa24.83■■□□□ 1.57
COPE-201ENST00000262812 PIGBQ92521 554 aa24.83■■□□□ 1.57
COPE-201ENST00000262812 BTAF1O14981 1849 aa24.83■■□□□ 1.57
COPE-201ENST00000262812 SLC27A3Q5K4L6 730 aa24.82■■□□□ 1.56
COPE-201ENST00000262812 DOT1LQ8TEK3 1739 aa24.82■■□□□ 1.56
COPE-201ENST00000262812 RGPD3A6NKT7 1758 aaPredicted RBP24.81■■□□□ 1.56
COPE-201ENST00000262812 RGPD4Q7Z3J3 1758 aa24.81■■□□□ 1.56
COPE-201ENST00000262812 CFAP53Q96M91 514 aa24.81■■□□□ 1.56
COPE-201ENST00000262812 PDGFDQ9GZP0 370 aaPredicted RBP24.8■■□□□ 1.56
COPE-201ENST00000262812 TMOD3Q9NYL9 352 aa24.8■■□□□ 1.56
COPE-201ENST00000262812 CCNL1Q9UK58 526 aaPredicted RBP24.8■■□□□ 1.56
COPE-201ENST00000262812 PKD1L3Q7Z443 1732 aa24.8■■□□□ 1.56
COPE-201ENST00000262812 C1orf141Q5JVX7 400 aa24.79■■□□□ 1.56
COPE-201ENST00000262812 KDRP35968 1356 aa24.79■■□□□ 1.56
COPE-201ENST00000262812 HSP90AB1P08238 724 aaKnown RBP24.77■■□□□ 1.56
COPE-201ENST00000262812 ZNF827Q17R98 1081 aa24.77■■□□□ 1.56
COPE-201ENST00000262812 DCAF5Q96JK2 942 aa24.77■■□□□ 1.56
COPE-201ENST00000262812 PLEKHG2Q9H7P9 1386 aa24.76■■□□□ 1.55
COPE-201ENST00000262812 SMARCC1Q92922 1105 aaPredicted RBP24.75■■□□□ 1.55
COPE-201ENST00000262812 PALLDQ8WX93 1383 aa24.75■■□□□ 1.55
COPE-201ENST00000262812 ZBTB7AO95365 584 aa24.74■■□□□ 1.55
COPE-201ENST00000262812 AKT1S1Q96B36 256 aa24.74■■□□□ 1.55
COPE-201ENST00000262812 ASAP1Q9ULH1 1129 aa24.74■■□□□ 1.55
COPE-201ENST00000262812 COL3A1P02461 1466 aaPredicted RBP24.73■■□□□ 1.55
COPE-201ENST00000262812 ERVV-2B6SEH9 535 aa24.73■■□□□ 1.55
COPE-201ENST00000262812 CABP4P57796 275 aa24.73■■□□□ 1.55
COPE-201ENST00000262812 NUDCQ9Y266 331 aa24.73■■□□□ 1.55
COPE-201ENST00000262812 MTHFSDQ2M296 383 aaKnown RBP24.72■■□□□ 1.55
COPE-201ENST00000262812 SPON1Q9HCB6 807 aa24.72■■□□□ 1.55
COPE-201ENST00000262812 TFCP2L1Q9NZI6 479 aa24.72■■□□□ 1.55
COPE-201ENST00000262812 AKAP4Q5JQC9 854 aa24.71■■□□□ 1.55
COPE-201ENST00000262812 ATG3Q9NT62 314 aa24.71■■□□□ 1.55
COPE-201ENST00000262812 ATF5Q9Y2D1 282 aaPredicted RBP24.71■■□□□ 1.55
COPE-201ENST00000262812 TOGARAM1Q9Y4F4 1720 aa24.7■■□□□ 1.54
COPE-201ENST00000262812 U2AF1L5P0DN76 240 aaPredicted RBP24.69■■□□□ 1.54
COPE-201ENST00000262812 U2AF1Q01081 240 aaKnown RBP eCLIP24.69■■□□□ 1.54
COPE-201ENST00000262812 NFATC2IPQ8NCF5 419 aa24.69■■□□□ 1.54
COPE-201ENST00000262812 LGR6Q9HBX8 967 aa24.69■■□□□ 1.54
COPE-201ENST00000262812 KDM6AO15550 1401 aaPredicted RBP24.69■■□□□ 1.54
COPE-201ENST00000262812 LOC102724428A0A0B4J2F2 783 aa24.67■■□□□ 1.54
COPE-201ENST00000262812 SIK1P57059 783 aa24.67■■□□□ 1.54
COPE-201ENST00000262812 PPP1R1BQ9UD71 204 aaPredicted RBP24.66■■□□□ 1.54
COPE-201ENST00000262812 MSH5O43196 834 aa24.65■■□□□ 1.54
COPE-201ENST00000262812 PRKAR2BP31323 418 aa24.65■■□□□ 1.54
COPE-201ENST00000262812 RBM42Q9BTD8 480 aaKnown RBP24.65■■□□□ 1.54
COPE-201ENST00000262812 RNMTO43148 476 aaKnown RBP24.64■■□□□ 1.54
COPE-201ENST00000262812 ATP6V1AP38606 617 aa24.64■■□□□ 1.54
COPE-201ENST00000262812 RALBP1Q15311 655 aa24.64■■□□□ 1.54
COPE-201ENST00000262812 PHACTR3Q96KR7 559 aa24.64■■□□□ 1.54
COPE-201ENST00000262812 RSPH6AQ9H0K4 717 aa24.64■■□□□ 1.54
COPE-201ENST00000262812 PAPPAQ13219 1627 aa24.64■■□□□ 1.53
COPE-201ENST00000262812 PNPLA7Q6ZV29 1317 aa24.63■■□□□ 1.53
COPE-201ENST00000262812 ITGB4P16144 1822 aa24.63■■□□□ 1.53
COPE-201ENST00000262812 LRP5O75197 1615 aa24.62■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms