RNA–Protein interactions for RNA: ENST00000262643.7

CCNE1-201, Transcript of cyclin E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCNE1, Length 2,043 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-201ENST00000262643 ZCRB1Q8TBF4 217 aaKnown RBP28.88■■■□□ 2.21
CCNE1-201ENST00000262643 KAT6BQ8WYB5 2073 aa28.88■■■□□ 2.21
CCNE1-201ENST00000262643 CAMKK2Q96RR4 588 aa28.87■■■□□ 2.21
CCNE1-201ENST00000262643 EYA1Q99502 592 aa28.87■■■□□ 2.21
CCNE1-201ENST00000262643 BCL11BQ9C0K0 894 aaPredicted RBP28.87■■■□□ 2.21
CCNE1-201ENST00000262643 TATP17735 454 aaPredicted RBP28.87■■■□□ 2.21
CCNE1-201ENST00000262643 ACSBG1Q96GR2 724 aa28.87■■■□□ 2.21
CCNE1-201ENST00000262643 KCNQ2O43526 872 aa28.85■■■□□ 2.21
CCNE1-201ENST00000262643 SHANK3Q9BYB0 1731 aa28.82■■■□□ 2.2
CCNE1-201ENST00000262643 NPC1L1Q9UHC9 1359 aa28.81■■■□□ 2.2
CCNE1-201ENST00000262643 NCAPD2Q15021 1401 aa28.8■■■□□ 2.2
CCNE1-201ENST00000262643 PARD3Q8TEW0 1356 aa28.8■■■□□ 2.2
CCNE1-201ENST00000262643 SRCAPQ6ZRS2 3230 aa28.8■■■□□ 2.2
CCNE1-201ENST00000262643 MTHFSP49914 203 aa28.79■■■□□ 2.2
CCNE1-201ENST00000262643 NHSQ6T4R5 1651 aa28.79■■■□□ 2.2
CCNE1-201ENST00000262643 PLSCR1O15162 318 aa28.76■■■□□ 2.19
CCNE1-201ENST00000262643 IGSF1Q8N6C5 1336 aa28.75■■■□□ 2.19
CCNE1-201ENST00000262643 PCDH11XQ9BZA7 1347 aa28.75■■■□□ 2.19
CCNE1-201ENST00000262643 PCDH11YQ9BZA8 1340 aa28.75■■■□□ 2.19
CCNE1-201ENST00000262643 SYTL4Q96C24 671 aaPredicted RBP28.75■■■□□ 2.19
CCNE1-201ENST00000262643 RREB1Q92766 1687 aa28.75■■■□□ 2.19
CCNE1-201ENST00000262643 PSDA5PKW4 1024 aaPredicted RBP28.74■■■□□ 2.19
CCNE1-201ENST00000262643 ANP32CO43423 234 aa28.72■■■□□ 2.19
CCNE1-201ENST00000262643 DOT1LQ8TEK3 1739 aa28.72■■■□□ 2.19
CCNE1-201ENST00000262643 PRIM1P49642 420 aaKnown RBP28.72■■■□□ 2.19
CCNE1-201ENST00000262643 BTAF1O14981 1849 aa28.72■■■□□ 2.19
CCNE1-201ENST00000262643 RGPD3A6NKT7 1758 aaPredicted RBP28.71■■■□□ 2.19
CCNE1-201ENST00000262643 RGPD4Q7Z3J3 1758 aa28.71■■■□□ 2.19
CCNE1-201ENST00000262643 NUP188Q5SRE5 1749 aa28.71■■■□□ 2.19
CCNE1-201ENST00000262643 PKD1L3Q7Z443 1732 aa28.71■■■□□ 2.19
CCNE1-201ENST00000262643 CYP27B1O15528 508 aa28.71■■■□□ 2.19
CCNE1-201ENST00000262643 SPG7Q9UQ90 795 aa28.71■■■□□ 2.19
CCNE1-201ENST00000262643 IL13P35225 146 aa28.7■■■□□ 2.19
CCNE1-201ENST00000262643 R3HDM1Q15032 1099 aaKnown RBP28.7■■■□□ 2.18
CCNE1-201ENST00000262643 AEBP1Q8IUX7 1158 aa28.69■■■□□ 2.18
CCNE1-201ENST00000262643 PROM2Q8N271 834 aa28.69■■■□□ 2.18
CCNE1-201ENST00000262643 SULT6B1Q6IMI4 303 aa28.67■■■□□ 2.18
CCNE1-201ENST00000262643 TXNRD1Q16881 649 aa28.66■■■□□ 2.18
CCNE1-201ENST00000262643 NBPF14Q5TI25 921 aa28.66■■■□□ 2.18
CCNE1-201ENST00000262643 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.66■■■□□ 2.18
CCNE1-201ENST00000262643 DIAPH1O60610 1272 aaKnown RBP28.64■■■□□ 2.18
CCNE1-201ENST00000262643 YTHDC1Q96MU7 727 aaKnown RBP28.62■■■□□ 2.17
CCNE1-201ENST00000262643 IFNL2Q8IZJ0 200 aa28.61■■■□□ 2.17
CCNE1-201ENST00000262643 PHKG2P15735 406 aa28.6■■■□□ 2.17
CCNE1-201ENST00000262643 HMOX1P09601 288 aa28.6■■■□□ 2.17
CCNE1-201ENST00000262643 PLEKHO1Q53GL0 409 aaPredicted RBP28.6■■■□□ 2.17
CCNE1-201ENST00000262643 KDRP35968 1356 aa28.6■■■□□ 2.17
CCNE1-201ENST00000262643 MPRIPQ6WCQ1 1025 aa28.59■■■□□ 2.17
CCNE1-201ENST00000262643 ANO8Q9HCE9 1232 aaPredicted RBP28.59■■■□□ 2.17
CCNE1-201ENST00000262643 PPP2R1AP30153 589 aa28.59■■■□□ 2.17
CCNE1-201ENST00000262643 TOGARAM1Q9Y4F4 1720 aa28.58■■■□□ 2.17
CCNE1-201ENST00000262643 NKX1-1Q15270 411 aaPredicted RBP28.58■■■□□ 2.17
CCNE1-201ENST00000262643 PLEKHG2Q9H7P9 1386 aa28.58■■■□□ 2.17
CCNE1-201ENST00000262643 COL3A1P02461 1466 aaPredicted RBP28.57■■■□□ 2.16
CCNE1-201ENST00000262643 AMOTQ4VCS5 1084 aa28.57■■■□□ 2.16
CCNE1-201ENST00000262643 U2SURPO15042 1029 aaKnown RBP28.56■■■□□ 2.16
CCNE1-201ENST00000262643 ZNF530Q6P9A1 599 aaPredicted RBP28.56■■■□□ 2.16
CCNE1-201ENST00000262643 ITGB4P16144 1822 aa28.55■■■□□ 2.16
CCNE1-201ENST00000262643 CFAP53Q96M91 514 aa28.55■■■□□ 2.16
CCNE1-201ENST00000262643 LRRC4BQ9NT99 713 aa28.54■■■□□ 2.16
CCNE1-201ENST00000262643 KCNQ4P56696 695 aa28.53■■■□□ 2.16
CCNE1-201ENST00000262643 CCER2I3L3R5 266 aa28.51■■■□□ 2.15
CCNE1-201ENST00000262643 STK32BQ9NY57 414 aa28.51■■■□□ 2.15
CCNE1-201ENST00000262643 C1orf141Q5JVX7 400 aa28.5■■■□□ 2.15
CCNE1-201ENST00000262643 SLC27A3Q5K4L6 730 aa28.5■■■□□ 2.15
CCNE1-201ENST00000262643 PIGBQ92521 554 aa28.5■■■□□ 2.15
CCNE1-201ENST00000262643 TMOD3Q9NYL9 352 aa28.49■■■□□ 2.15
CCNE1-201ENST00000262643 LY75O60449 1722 aa28.49■■■□□ 2.15
CCNE1-201ENST00000262643 HSP90AB1P08238 724 aaKnown RBP28.48■■■□□ 2.15
CCNE1-201ENST00000262643 PRKRIP1Q9H875 184 aaPredicted RBP28.48■■■□□ 2.15
CCNE1-201ENST00000262643 SLC15A2Q16348 729 aa28.48■■■□□ 2.15
CCNE1-201ENST00000262643 DCAF5Q96JK2 942 aa28.47■■■□□ 2.15
CCNE1-201ENST00000262643 CCNL1Q9UK58 526 aaPredicted RBP28.47■■■□□ 2.15
CCNE1-201ENST00000262643 PALLDQ8WX93 1383 aa28.46■■■□□ 2.15
CCNE1-201ENST00000262643 PAPPAQ13219 1627 aa28.46■■■□□ 2.15
CCNE1-201ENST00000262643 NUDCQ9Y266 331 aa28.45■■■□□ 2.14
CCNE1-201ENST00000262643 KDM6AO15550 1401 aaPredicted RBP28.44■■■□□ 2.14
CCNE1-201ENST00000262643 PDGFDQ9GZP0 370 aaPredicted RBP28.44■■■□□ 2.14
CCNE1-201ENST00000262643 ZNF827Q17R98 1081 aa28.43■■■□□ 2.14
CCNE1-201ENST00000262643 ERVV-2B6SEH9 535 aa28.42■■■□□ 2.14
CCNE1-201ENST00000262643 MTHFSDQ2M296 383 aaKnown RBP28.42■■■□□ 2.14
CCNE1-201ENST00000262643 SMARCC1Q92922 1105 aaPredicted RBP28.42■■■□□ 2.14
CCNE1-201ENST00000262643 ASAP1Q9ULH1 1129 aa28.42■■■□□ 2.14
CCNE1-201ENST00000262643 U2AF1L5P0DN76 240 aaPredicted RBP28.41■■■□□ 2.14
CCNE1-201ENST00000262643 U2AF1Q01081 240 aaKnown RBP eCLIP28.41■■■□□ 2.14
CCNE1-201ENST00000262643 AKAP4Q5JQC9 854 aa28.41■■■□□ 2.14
CCNE1-201ENST00000262643 CABP4P57796 275 aa28.4■■■□□ 2.14
CCNE1-201ENST00000262643 LRP5O75197 1615 aa28.4■■■□□ 2.14
CCNE1-201ENST00000262643 RALBP1Q15311 655 aa28.38■■■□□ 2.13
CCNE1-201ENST00000262643 AKT1S1Q96B36 256 aa28.38■■■□□ 2.13
CCNE1-201ENST00000262643 PRKAR2BP31323 418 aa28.37■■■□□ 2.13
CCNE1-201ENST00000262643 ATG3Q9NT62 314 aa28.37■■■□□ 2.13
CCNE1-201ENST00000262643 CASZ1Q86V15 1759 aa28.37■■■□□ 2.13
CCNE1-201ENST00000262643 RSPH6AQ9H0K4 717 aa28.36■■■□□ 2.13
CCNE1-201ENST00000262643 CENPBP07199 599 aaPredicted RBP28.35■■■□□ 2.13
CCNE1-201ENST00000262643 NFATC2IPQ8NCF5 419 aa28.35■■■□□ 2.13
CCNE1-201ENST00000262643 LGR6Q9HBX8 967 aa28.35■■■□□ 2.13
CCNE1-201ENST00000262643 TFCP2L1Q9NZI6 479 aa28.35■■■□□ 2.13
CCNE1-201ENST00000262643 SCN11AQ9UI33 1791 aa28.35■■■□□ 2.13
CCNE1-201ENST00000262643 ZBTB7AO95365 584 aa28.35■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms