RNA–Protein interactions for RNA: ENST00000262435.13

SMURF2-201, Transcript of SMAD specific E3 ubiquitin protein ligase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMURF2, Length 2,918 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF2-201ENST00000262435 NCOA3Q9Y6Q9 1424 aa19.47■□□□□ 0.71
SMURF2-201ENST00000262435 ANKRD44Q8N8A2 993 aa19.47■□□□□ 0.71
SMURF2-201ENST00000262435 USP26Q9BXU7 913 aa19.47■□□□□ 0.71
SMURF2-201ENST00000262435 CPSF1Q10570 1443 aaKnown RBP19.46■□□□□ 0.71
SMURF2-201ENST00000262435 LTV1Q96GA3 475 aaPredicted RBP19.46■□□□□ 0.71
SMURF2-201ENST00000262435 PIK3R4Q99570 1358 aa19.46■□□□□ 0.71
SMURF2-201ENST00000262435 BAG4O95429 457 aaKnown RBP19.45■□□□□ 0.7
SMURF2-201ENST00000262435 TSPYL4Q9UJ04 414 aa19.45■□□□□ 0.7
SMURF2-201ENST00000262435 AK9Q5TCS8 1911 aa19.45■□□□□ 0.7
SMURF2-201ENST00000262435 INTS3Q68E01 1043 aaKnown RBP19.45■□□□□ 0.7
SMURF2-201ENST00000262435 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.45■□□□□ 0.7
SMURF2-201ENST00000262435 CHL1O00533 1208 aa19.45■□□□□ 0.7
SMURF2-201ENST00000262435 RICTORQ6R327 1708 aa19.44■□□□□ 0.7
SMURF2-201ENST00000262435 TTC21BQ7Z4L5 1316 aa19.44■□□□□ 0.7
SMURF2-201ENST00000262435 TRIM44Q96DX7 344 aaPredicted RBP19.44■□□□□ 0.7
SMURF2-201ENST00000262435 ATP7BP35670 1465 aa19.44■□□□□ 0.7
SMURF2-201ENST00000262435 MTHFSDQ2M296 383 aaKnown RBP19.44■□□□□ 0.7
SMURF2-201ENST00000262435 CAVIN1Q6NZI2 390 aaKnown RBP19.44■□□□□ 0.7
SMURF2-201ENST00000262435 CEBPAP49715 358 aaPredicted RBP19.43■□□□□ 0.7
SMURF2-201ENST00000262435 CIZ1Q9ULV3 898 aaPredicted RBP19.43■□□□□ 0.7
SMURF2-201ENST00000262435 KIF20BQ96Q89 1820 aa19.43■□□□□ 0.7
SMURF2-201ENST00000262435 RTF1Q92541 710 aaKnown RBP19.42■□□□□ 0.7
SMURF2-201ENST00000262435 ANKRD26Q9UPS8 1709 aa19.42■□□□□ 0.7
SMURF2-201ENST00000262435 TSPOAP1O95153 1857 aa19.41■□□□□ 0.7
SMURF2-201ENST00000262435 RBM27Q9P2N5 1060 aaKnown RBP19.41■□□□□ 0.7
SMURF2-201ENST00000262435 RTL1A6NKG5 1358 aa19.41■□□□□ 0.7
SMURF2-201ENST00000262435 ROBO2Q9HCK4 1378 aa19.41■□□□□ 0.7
SMURF2-201ENST00000262435 MAP3K19Q56UN5 1328 aa19.41■□□□□ 0.7
SMURF2-201ENST00000262435 DTNBO60941 627 aa19.41■□□□□ 0.7
SMURF2-201ENST00000262435 GOLGA6L22H0YM25 854 aa19.41■□□□□ 0.7
SMURF2-201ENST00000262435 ESPNB1AK53 854 aa19.4■□□□□ 0.7
SMURF2-201ENST00000262435 PRPF40AO75400 957 aaKnown RBP19.4■□□□□ 0.7
SMURF2-201ENST00000262435 RABEP1Q15276 862 aa19.4■□□□□ 0.7
SMURF2-201ENST00000262435 RILPL2Q969X0 211 aa19.4■□□□□ 0.7
SMURF2-201ENST00000262435 CDK12Q9NYV4 1490 aaPredicted RBP19.4■□□□□ 0.7
SMURF2-201ENST00000262435 CLTCQ00610 1675 aaKnown RBP19.39■□□□□ 0.7
SMURF2-201ENST00000262435 RPAP2Q8IXW5 612 aaPredicted RBP19.39■□□□□ 0.7
SMURF2-201ENST00000262435 TRIM6-TRIM34B2RNG4 842 aa19.39■□□□□ 0.69
SMURF2-201ENST00000262435 ATP10DQ9P241 1426 aa19.39■□□□□ 0.69
SMURF2-201ENST00000262435 MAP4K4O95819 1239 aaPredicted RBP19.38■□□□□ 0.69
SMURF2-201ENST00000262435 FKBP5Q13451 457 aaPredicted RBP19.38■□□□□ 0.69
SMURF2-201ENST00000262435 AATKQ6ZMQ8 1374 aa19.38■□□□□ 0.69
SMURF2-201ENST00000262435 LTKP29376 864 aa19.38■□□□□ 0.69
SMURF2-201ENST00000262435 AMPHP49418 695 aa19.38■□□□□ 0.69
SMURF2-201ENST00000262435 NEK4P51957 841 aa19.38■□□□□ 0.69
SMURF2-201ENST00000262435 KNDC1Q76NI1 1749 aa19.38■□□□□ 0.69
SMURF2-201ENST00000262435 RGS12O14924 1447 aa19.38■□□□□ 0.69
SMURF2-201ENST00000262435 ZBTB7CA1YPR0 619 aa19.38■□□□□ 0.69
SMURF2-201ENST00000262435 CASC1Q6TDU7 716 aa19.38■□□□□ 0.69
SMURF2-201ENST00000262435 C14orf37Q86TY3 774 aa19.38■□□□□ 0.69
SMURF2-201ENST00000262435 NASPP49321 788 aaPredicted RBP19.37■□□□□ 0.69
SMURF2-201ENST00000262435 NGDNQ8NEJ9 315 aaKnown RBP19.37■□□□□ 0.69
SMURF2-201ENST00000262435 PNMA6EA0A0J9YXQ4 647 aa19.37■□□□□ 0.69
SMURF2-201ENST00000262435 CDC42BPGQ6DT37 1551 aa19.37■□□□□ 0.69
SMURF2-201ENST00000262435 USHBP1Q8N6Y0 703 aa19.36■□□□□ 0.69
SMURF2-201ENST00000262435 IL1RAPL2Q9NP60 686 aa19.36■□□□□ 0.69
SMURF2-201ENST00000262435 CLCN1P35523 988 aa19.36■□□□□ 0.69
SMURF2-201ENST00000262435 PDE1AP54750 535 aa19.36■□□□□ 0.69
SMURF2-201ENST00000262435 SKOR2Q2VWA4 1001 aaPredicted RBP19.36■□□□□ 0.69
SMURF2-201ENST00000262435 RBM33Q96EV2 1170 aaKnown RBP19.36■□□□□ 0.69
SMURF2-201ENST00000262435 DLG5Q8TDM6 1919 aa19.36■□□□□ 0.69
SMURF2-201ENST00000262435 LARP6Q9BRS8 491 aaKnown RBP19.35■□□□□ 0.69
SMURF2-201ENST00000262435 EYA1Q99502 592 aa19.35■□□□□ 0.69
SMURF2-201ENST00000262435 UPF3BQ9BZI7 483 aaKnown RBP19.35■□□□□ 0.69
SMURF2-201ENST00000262435 PALD1Q9ULE6 856 aa19.35■□□□□ 0.69
SMURF2-201ENST00000262435 ST18O60284 1047 aa19.34■□□□□ 0.69
SMURF2-201ENST00000262435 ANO2Q9NQ90 1003 aa19.34■□□□□ 0.69
SMURF2-201ENST00000262435 NSFL1CQ9UNZ2 370 aaKnown RBP19.34■□□□□ 0.69
SMURF2-201ENST00000262435 ERC2O15083 957 aa19.33■□□□□ 0.69
SMURF2-201ENST00000262435 ZDHHC9Q9Y397 364 aa19.33■□□□□ 0.69
SMURF2-201ENST00000262435 UNC5CLQ8IV45 518 aa19.33■□□□□ 0.68
SMURF2-201ENST00000262435 STK31Q9BXU1 1019 aa19.32■□□□□ 0.68
SMURF2-201ENST00000262435 KLHL40Q2TBA0 621 aa19.32■□□□□ 0.68
SMURF2-201ENST00000262435 LMBRD1Q9NUN5 540 aa19.32■□□□□ 0.68
SMURF2-201ENST00000262435 HMMRO75330 724 aa19.31■□□□□ 0.68
SMURF2-201ENST00000262435 LRRFIP2Q9Y608 721 aaKnown RBP19.31■□□□□ 0.68
SMURF2-201ENST00000262435 REC8O95072 547 aa19.31■□□□□ 0.68
SMURF2-201ENST00000262435 EIF2S2P20042 333 aaKnown RBP19.31■□□□□ 0.68
SMURF2-201ENST00000262435 NLRP6P59044 892 aa19.31■□□□□ 0.68
SMURF2-201ENST00000262435 ZSCAN23Q3MJ62 389 aa19.31■□□□□ 0.68
SMURF2-201ENST00000262435 NUTM1Q86Y26 1132 aa19.31■□□□□ 0.68
SMURF2-201ENST00000262435 PTPRCP08575 1304 aa19.31■□□□□ 0.68
SMURF2-201ENST00000262435 GNAI2P04899 355 aa19.31■□□□□ 0.68
SMURF2-201ENST00000262435 RNF214Q8ND24 703 aa19.31■□□□□ 0.68
SMURF2-201ENST00000262435 GDPD2Q9HCC8 539 aa19.31■□□□□ 0.68
SMURF2-201ENST00000262435 PRIM1P49642 420 aaKnown RBP19.3■□□□□ 0.68
SMURF2-201ENST00000262435 FLIIQ13045 1269 aa19.3■□□□□ 0.68
SMURF2-201ENST00000262435 GPT2Q8TD30 523 aa19.3■□□□□ 0.68
SMURF2-201ENST00000262435 NUCB2P80303 420 aa19.29■□□□□ 0.68
SMURF2-201ENST00000262435 MPNDQ8N594 471 aa19.29■□□□□ 0.68
SMURF2-201ENST00000262435 ANXA1P04083 346 aa19.29■□□□□ 0.68
SMURF2-201ENST00000262435 RBSNQ9H1K0 784 aa19.29■□□□□ 0.68
SMURF2-201ENST00000262435 IL25Q9H293 177 aa19.29■□□□□ 0.68
SMURF2-201ENST00000262435 DLC1Q96QB1 1528 aa19.29■□□□□ 0.68
SMURF2-201ENST00000262435 HDGFP51858 240 aaKnown RBP19.28■□□□□ 0.68
SMURF2-201ENST00000262435 UBE2Q2Q8WVN8 375 aa19.28■□□□□ 0.68
SMURF2-201ENST00000262435 TMX3Q96JJ7 454 aa19.28■□□□□ 0.68
SMURF2-201ENST00000262435 PHAXQ9H814 394 aaKnown RBP19.28■□□□□ 0.68
SMURF2-201ENST00000262435 RIMBP3CA6NJZ7 1639 aa19.28■□□□□ 0.68
SMURF2-201ENST00000262435 RIMBP3BA6NNM3 1639 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms