RNA–Protein interactions for RNA: ENST00000262291.8

VMP1-201, Transcript of vacuole membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMP1, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-201ENST00000262291 LRRC59Q96AG4 307 aaKnown RBP17.27■□□□□ 0.36
VMP1-201ENST00000262291 PDZRN3Q9UPQ7 1066 aa17.26■□□□□ 0.35
VMP1-201ENST00000262291 CHL1O00533 1208 aa17.25■□□□□ 0.35
VMP1-201ENST00000262291 KRT28Q7Z3Y7 464 aa17.25■□□□□ 0.35
VMP1-201ENST00000262291 DDX19BQ9UMR2 479 aa17.25■□□□□ 0.35
VMP1-201ENST00000262291 NBPF6Q5VWK0 638 aa17.24■□□□□ 0.35
VMP1-201ENST00000262291 NBPF4Q96M43 638 aa17.24■□□□□ 0.35
VMP1-201ENST00000262291 RWDD1Q9H446 243 aaPredicted RBP17.24■□□□□ 0.35
VMP1-201ENST00000262291 C8orf34Q49A92 452 aa17.24■□□□□ 0.35
VMP1-201ENST00000262291 NECTIN2Q92692 538 aa17.24■□□□□ 0.35
VMP1-201ENST00000262291 TSPYL4Q9UJ04 414 aa17.24■□□□□ 0.35
VMP1-201ENST00000262291 TMEM94Q12767 1356 aa17.23■□□□□ 0.35
VMP1-201ENST00000262291 KDRP35968 1356 aa17.22■□□□□ 0.35
VMP1-201ENST00000262291 GCP02774 474 aa17.22■□□□□ 0.35
VMP1-201ENST00000262291 IP6K1Q92551 441 aa17.22■□□□□ 0.35
VMP1-201ENST00000262291 C19orf44Q9H6X5 657 aa17.22■□□□□ 0.35
VMP1-201ENST00000262291 CRB1P82279 1406 aa17.22■□□□□ 0.35
VMP1-201ENST00000262291 ZC3H6P61129 1189 aaKnown RBP17.22■□□□□ 0.35
VMP1-201ENST00000262291 ZBTB40Q9NUA8 1239 aa17.22■□□□□ 0.35
VMP1-201ENST00000262291 ATF3P18847 181 aa17.21■□□□□ 0.35
VMP1-201ENST00000262291 FAM161AQ3B820 660 aa17.21■□□□□ 0.35
VMP1-201ENST00000262291 GAS2L2Q8NHY3 880 aa17.21■□□□□ 0.35
VMP1-201ENST00000262291 LTN1O94822 1766 aa17.21■□□□□ 0.35
VMP1-201ENST00000262291 NWD1Q149M9 1564 aa17.2■□□□□ 0.34
VMP1-201ENST00000262291 CABLES1Q8TDN4 633 aa17.2■□□□□ 0.34
VMP1-201ENST00000262291 C1orf167Q5SNV9 1468 aa17.19■□□□□ 0.34
VMP1-201ENST00000262291 IL17REQ8NFR9 667 aa17.19■□□□□ 0.34
VMP1-201ENST00000262291 BRPF3Q9ULD4 1205 aa17.19■□□□□ 0.34
VMP1-201ENST00000262291 GNAT3A8MTJ3 354 aa17.19■□□□□ 0.34
VMP1-201ENST00000262291 ZNF428Q96B54 188 aa17.19■□□□□ 0.34
VMP1-201ENST00000262291 AXIN2Q9Y2T1 843 aa17.19■□□□□ 0.34
VMP1-201ENST00000262291 NFAT5O94916 1531 aa17.18■□□□□ 0.34
VMP1-201ENST00000262291 ZBTB7BO15156 539 aaPredicted RBP17.17■□□□□ 0.34
VMP1-201ENST00000262291 KCNH5Q8NCM2 988 aa17.17■□□□□ 0.34
VMP1-201ENST00000262291 STRCP1A6NGW2 1772 aa17.17■□□□□ 0.34
VMP1-201ENST00000262291 SLC4A2P04920 1241 aa17.17■□□□□ 0.34
VMP1-201ENST00000262291 AAMPQ13685 434 aa17.17■□□□□ 0.34
VMP1-201ENST00000262291 G2E3Q7L622 706 aa17.17■□□□□ 0.34
VMP1-201ENST00000262291 SEC24BO95487 1268 aa17.16■□□□□ 0.34
VMP1-201ENST00000262291 BRPF1P55201 1214 aaPredicted RBP17.16■□□□□ 0.34
VMP1-201ENST00000262291 LGR6Q9HBX8 967 aa17.16■□□□□ 0.34
VMP1-201ENST00000262291 RGPD2P0DJD1 1756 aa17.16■□□□□ 0.34
VMP1-201ENST00000262291 MSH6P52701 1360 aa17.15■□□□□ 0.34
VMP1-201ENST00000262291 ARHGEF25Q86VW2 580 aa17.15■□□□□ 0.34
VMP1-201ENST00000262291 KDM4FA0A1W2PPD8 638 aa17.15■□□□□ 0.34
VMP1-201ENST00000262291 ANKRD24Q8TF21 1146 aa17.15■□□□□ 0.34
VMP1-201ENST00000262291 ABCC4O15439 1325 aa17.14■□□□□ 0.34
VMP1-201ENST00000262291 F6X3S4 739 aa17.14■□□□□ 0.33
VMP1-201ENST00000262291 SLC4A3P48751 1232 aa17.14■□□□□ 0.33
VMP1-201ENST00000262291 ARHGAP45Q92619 1136 aa17.14■□□□□ 0.33
VMP1-201ENST00000262291 MAP3K5Q99683 1374 aa17.14■□□□□ 0.33
VMP1-201ENST00000262291 API5Q9BZZ5 524 aaKnown RBP17.13■□□□□ 0.33
VMP1-201ENST00000262291 HDAC1Q13547 482 aaPredicted RBP17.13■□□□□ 0.33
VMP1-201ENST00000262291 SLC4A10Q6U841 1118 aa17.13■□□□□ 0.33
VMP1-201ENST00000262291 MPRIPQ6WCQ1 1025 aa17.13■□□□□ 0.33
VMP1-201ENST00000262291 LNPKQ9C0E8 428 aa17.13■□□□□ 0.33
VMP1-201ENST00000262291 RTL1A6NKG5 1358 aa17.13■□□□□ 0.33
VMP1-201ENST00000262291 KIF24Q5T7B8 1368 aa17.13■□□□□ 0.33
VMP1-201ENST00000262291 CHRNA2Q15822 529 aa17.12■□□□□ 0.33
VMP1-201ENST00000262291 MST1RQ04912 1400 aa17.12■□□□□ 0.33
VMP1-201ENST00000262291 USP54Q70EL1 1684 aa17.12■□□□□ 0.33
VMP1-201ENST00000262291 ZNF530Q6P9A1 599 aaPredicted RBP17.12■□□□□ 0.33
VMP1-201ENST00000262291 SIRT2Q8IXJ6 389 aa17.12■□□□□ 0.33
VMP1-201ENST00000262291 KCNQ3O43525 872 aa17.11■□□□□ 0.33
VMP1-201ENST00000262291 KIAA0232Q92628 1395 aa17.11■□□□□ 0.33
VMP1-201ENST00000262291 TAF7Q15545 349 aaPredicted RBP17.1■□□□□ 0.33
VMP1-201ENST00000262291 ZNF335Q9H4Z2 1342 aaPredicted RBP17.09■□□□□ 0.33
VMP1-201ENST00000262291 ANKRD45Q5TZF3 282 aa17.09■□□□□ 0.33
VMP1-201ENST00000262291 RGS12O14924 1447 aa17.08■□□□□ 0.33
VMP1-201ENST00000262291 SMC5Q8IY18 1101 aa17.08■□□□□ 0.33
VMP1-201ENST00000262291 USP19O94966 1318 aa17.08■□□□□ 0.33
VMP1-201ENST00000262291 EIF2S2P20042 333 aaKnown RBP17.08■□□□□ 0.32
VMP1-201ENST00000262291 MEIS3Q99687 375 aa17.08■□□□□ 0.32
VMP1-201ENST00000262291 NLRP2Q9NX02 1062 aa17.08■□□□□ 0.32
VMP1-201ENST00000262291 TRPM3Q9HCF6 1732 aaPredicted RBP17.08■□□□□ 0.32
VMP1-201ENST00000262291 APBB1O00213 710 aa17.07■□□□□ 0.32
VMP1-201ENST00000262291 HTATSF1O43719 755 aaKnown RBP17.07■□□□□ 0.32
VMP1-201ENST00000262291 CADPS2Q86UW7 1296 aa17.07■□□□□ 0.32
VMP1-201ENST00000262291 RGPD5Q99666 1765 aa17.06■□□□□ 0.32
VMP1-201ENST00000262291 STK31Q9BXU1 1019 aa17.06■□□□□ 0.32
VMP1-201ENST00000262291 PXDNQ92626 1479 aa17.06■□□□□ 0.32
VMP1-201ENST00000262291 SLIT3O75094 1523 aa17.05■□□□□ 0.32
VMP1-201ENST00000262291 ANXA1P04083 346 aa17.05■□□□□ 0.32
VMP1-201ENST00000262291 CSB-PGBD3P0DP91 1061 aa17.05■□□□□ 0.32
VMP1-201ENST00000262291 PLEKHO1Q53GL0 409 aaPredicted RBP17.05■□□□□ 0.32
VMP1-201ENST00000262291 INTS3Q68E01 1043 aaKnown RBP17.05■□□□□ 0.32
VMP1-201ENST00000262291 MED1Q15648 1581 aaPredicted RBP17.05■□□□□ 0.32
VMP1-201ENST00000262291 FKBP5Q13451 457 aaPredicted RBP17.05■□□□□ 0.32
VMP1-201ENST00000262291 HAP1P54257 671 aaPredicted RBP17.04■□□□□ 0.32
VMP1-201ENST00000262291 NUCB1Q02818 461 aa17.04■□□□□ 0.32
VMP1-201ENST00000262291 CHD1LQ86WJ1 897 aa17.04■□□□□ 0.32
VMP1-201ENST00000262291 TEFQ10587 303 aa17.04■□□□□ 0.32
VMP1-201ENST00000262291 C1orf141Q5JVX7 400 aa17.03■□□□□ 0.32
VMP1-201ENST00000262291 PHAXQ9H814 394 aaKnown RBP17.03■□□□□ 0.32
VMP1-201ENST00000262291 FLIIQ13045 1269 aa17.03■□□□□ 0.32
VMP1-201ENST00000262291 HDGFL1Q5TGJ6 251 aa17.03■□□□□ 0.32
VMP1-201ENST00000262291 BRINP3Q76B58 766 aa17.03■□□□□ 0.32
VMP1-201ENST00000262291 PTPRCP08575 1304 aa17.02■□□□□ 0.32
VMP1-201ENST00000262291 ERBB3P21860 1342 aa17.02■□□□□ 0.32
VMP1-201ENST00000262291 NPHP3Q7Z494 1330 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms