RNA–Protein interactions for RNA: ENST00000262188.12

SMARCD3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD3, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-201ENST00000262188 NFE2L2Q16236 605 aa36.19■■■■□ 3.38
SMARCD3-201ENST00000262188 SPATA31A5Q5VU36 1347 aa36.19■■■■□ 3.38
SMARCD3-201ENST00000262188 SPATA31A7Q8IWB4 1347 aa36.19■■■■□ 3.38
SMARCD3-201ENST00000262188 TATP17735 454 aaPredicted RBP36.18■■■■□ 3.38
SMARCD3-201ENST00000262188 VPS72Q15906 364 aa36.16■■■■□ 3.38
SMARCD3-201ENST00000262188 IL2RBP14784 551 aa36.15■■■■□ 3.38
SMARCD3-201ENST00000262188 ILDR1Q86SU0 546 aaPredicted RBP36.15■■■■□ 3.38
SMARCD3-201ENST00000262188 DLG5Q8TDM6 1919 aa36.15■■■■□ 3.38
SMARCD3-201ENST00000262188 TRIM35Q9UPQ4 493 aa36.15■■■■□ 3.38
SMARCD3-201ENST00000262188 ZBED9Q6R2W3 1325 aa36.14■■■■□ 3.38
SMARCD3-201ENST00000262188 TNKS1BP1Q9C0C2 1729 aaKnown RBP36.13■■■■□ 3.37
SMARCD3-201ENST00000262188 DCTN1Q14203 1278 aa36.12■■■■□ 3.37
SMARCD3-201ENST00000262188 PLEKHO1Q53GL0 409 aaPredicted RBP36.11■■■■□ 3.37
SMARCD3-201ENST00000262188 THUMPD2Q9BTF0 503 aaKnown RBP36.11■■■■□ 3.37
SMARCD3-201ENST00000262188 OVOS2A0A0G2JMS6 1433 aa36.11■■■■□ 3.37
SMARCD3-201ENST00000262188 ZNF530Q6P9A1 599 aaPredicted RBP36.11■■■■□ 3.37
SMARCD3-201ENST00000262188 WWC1Q8IX03 1113 aa36.1■■■■□ 3.37
SMARCD3-201ENST00000262188 DISP2A7MBM2 1401 aa36.09■■■■□ 3.37
SMARCD3-201ENST00000262188 GAS2L2Q8NHY3 880 aa36.09■■■■□ 3.37
SMARCD3-201ENST00000262188 PARP4Q9UKK3 1724 aaKnown RBP36.08■■■■□ 3.37
SMARCD3-201ENST00000262188 FAM98CQ17RN3 349 aaKnown RBP36.08■■■■□ 3.37
SMARCD3-201ENST00000262188 AMOTQ4VCS5 1084 aa36.06■■■■□ 3.36
SMARCD3-201ENST00000262188 MCM10Q7L590 875 aa36.06■■■■□ 3.36
SMARCD3-201ENST00000262188 ZNF521Q96K83 1311 aa36.06■■■■□ 3.36
SMARCD3-201ENST00000262188 PHF23Q9BUL5 403 aaPredicted RBP36.06■■■■□ 3.36
SMARCD3-201ENST00000262188 QTRT2Q9H974 415 aaKnown RBP36.06■■■■□ 3.36
SMARCD3-201ENST00000262188 TSHZ2Q9NRE2 1034 aa36.06■■■■□ 3.36
SMARCD3-201ENST00000262188 ATRNO75882 1429 aa36.05■■■■□ 3.36
SMARCD3-201ENST00000262188 WNK3Q9BYP7 1800 aa36.05■■■■□ 3.36
SMARCD3-201ENST00000262188 CDCA7LQ96GN5 454 aa36.05■■■■□ 3.36
SMARCD3-201ENST00000262188 ZCRB1Q8TBF4 217 aaKnown RBP36.04■■■■□ 3.36
SMARCD3-201ENST00000262188 PKD1L3Q7Z443 1732 aa36.04■■■■□ 3.36
SMARCD3-201ENST00000262188 TRPC5Q9UL62 973 aaPredicted RBP36.04■■■■□ 3.36
SMARCD3-201ENST00000262188 SPG7Q9UQ90 795 aa36.04■■■■□ 3.36
SMARCD3-201ENST00000262188 GLI3P10071 1580 aa36.03■■■■□ 3.36
SMARCD3-201ENST00000262188 CYP27B1O15528 508 aa36.03■■■■□ 3.36
SMARCD3-201ENST00000262188 GJD4Q96KN9 370 aaPredicted RBP36.03■■■■□ 3.36
SMARCD3-201ENST00000262188 SPINK5Q9NQ38 1064 aaPredicted RBP36.02■■■■□ 3.36
SMARCD3-201ENST00000262188 THRAP3Q9Y2W1 955 aaKnown RBP36.02■■■■□ 3.36
SMARCD3-201ENST00000262188 DDX54Q8TDD1 881 aaKnown RBP36.02■■■■□ 3.36
SMARCD3-201ENST00000262188 MAP3K5Q99683 1374 aa36.01■■■■□ 3.36
SMARCD3-201ENST00000262188 GNAT3A8MTJ3 354 aa36.01■■■■□ 3.36
SMARCD3-201ENST00000262188 CCDC27Q2M243 656 aa36■■■■□ 3.35
SMARCD3-201ENST00000262188 MPRIPQ6WCQ1 1025 aa36■■■■□ 3.35
SMARCD3-201ENST00000262188 SHANK3Q9BYB0 1731 aa36■■■■□ 3.35
SMARCD3-201ENST00000262188 C1orf141Q5JVX7 400 aa35.99■■■■□ 3.35
SMARCD3-201ENST00000262188 BARGINQ6ZT62 677 aa35.99■■■■□ 3.35
SMARCD3-201ENST00000262188 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP35.99■■■■□ 3.35
SMARCD3-201ENST00000262188 PHKG2P15735 406 aa35.98■■■■□ 3.35
SMARCD3-201ENST00000262188 LGR6Q9HBX8 967 aa35.98■■■■□ 3.35
SMARCD3-201ENST00000262188 A0A0G2JS52 829 aa35.98■■■■□ 3.35
SMARCD3-201ENST00000262188 AKAP4Q5JQC9 854 aa35.98■■■■□ 3.35
SMARCD3-201ENST00000262188 IL17REQ8NFR9 667 aa35.97■■■■□ 3.35
SMARCD3-201ENST00000262188 RGS17Q9UGC6 210 aaPredicted RBP35.96■■■■□ 3.35
SMARCD3-201ENST00000262188 RTF1Q92541 710 aaKnown RBP35.96■■■■□ 3.35
SMARCD3-201ENST00000262188 NGEFQ8N5V2 710 aa35.95■■■■□ 3.35
SMARCD3-201ENST00000262188 PCDH11XQ9BZA7 1347 aa35.94■■■■□ 3.34
SMARCD3-201ENST00000262188 PCDH11YQ9BZA8 1340 aa35.94■■■■□ 3.34
SMARCD3-201ENST00000262188 LRRC37A3O60309 1634 aa35.93■■■■□ 3.34
SMARCD3-201ENST00000262188 EXOC5O00471 708 aa35.93■■■■□ 3.34
SMARCD3-201ENST00000262188 LMOD3Q0VAK6 560 aa35.93■■■■□ 3.34
SMARCD3-201ENST00000262188 IFNL2Q8IZJ0 200 aa35.93■■■■□ 3.34
SMARCD3-201ENST00000262188 ZNF772Q68DY9 489 aaPredicted RBP35.93■■■■□ 3.34
SMARCD3-201ENST00000262188 GOLGA2Q08379 1002 aa35.92■■■■□ 3.34
SMARCD3-201ENST00000262188 DDB1Q16531 1140 aa35.92■■■■□ 3.34
SMARCD3-201ENST00000262188 NCBP3Q53F19 620 aaKnown RBP35.92■■■■□ 3.34
SMARCD3-201ENST00000262188 LAS1LQ9Y4W2 734 aaKnown RBP35.91■■■■□ 3.34
SMARCD3-201ENST00000262188 CDCA7Q9BWT1 371 aaPredicted RBP35.91■■■■□ 3.34
SMARCD3-201ENST00000262188 TNS2Q63HR2 1409 aa35.9■■■■□ 3.34
SMARCD3-201ENST00000262188 KDM6AO15550 1401 aaPredicted RBP35.9■■■■□ 3.34
SMARCD3-201ENST00000262188 PLEKHG2Q9H7P9 1386 aa35.89■■■■□ 3.34
SMARCD3-201ENST00000262188 WDR63Q8IWG1 891 aa35.89■■■■□ 3.34
SMARCD3-201ENST00000262188 RNMTO43148 476 aaKnown RBP35.88■■■■□ 3.33
SMARCD3-201ENST00000262188 SUPT16HQ9Y5B9 1047 aaKnown RBP35.88■■■■□ 3.33
SMARCD3-201ENST00000262188 VIRMAQ69YN4 1812 aaKnown RBP35.87■■■■□ 3.33
SMARCD3-201ENST00000262188 THSD7AQ9UPZ6 1657 aa35.86■■■■□ 3.33
SMARCD3-201ENST00000262188 HTATSF1O43719 755 aaKnown RBP35.86■■■■□ 3.33
SMARCD3-201ENST00000262188 MIS18AQ9NYP9 233 aa35.86■■■■□ 3.33
SMARCD3-201ENST00000262188 SLFN5Q08AF3 891 aa35.85■■■■□ 3.33
SMARCD3-201ENST00000262188 TSR2Q969E8 191 aaKnown RBP35.85■■■■□ 3.33
SMARCD3-201ENST00000262188 POTEAQ6S8J7 498 aa35.84■■■■□ 3.33
SMARCD3-201ENST00000262188 MARCH10Q8NA82 808 aaPredicted RBP35.84■■■■□ 3.33
SMARCD3-201ENST00000262188 CEMIPQ8WUJ3 1361 aa35.84■■■■□ 3.33
SMARCD3-201ENST00000262188 SEPT12Q8IYM1 358 aa35.83■■■■□ 3.33
SMARCD3-201ENST00000262188 FAM182BQ5T319 152 aa35.82■■■■□ 3.32
SMARCD3-201ENST00000262188 PDE3BQ13370 1112 aa35.81■■■■□ 3.32
SMARCD3-201ENST00000262188 DCAF5Q96JK2 942 aa35.8■■■■□ 3.32
SMARCD3-201ENST00000262188 SCN11AQ9UI33 1791 aa35.8■■■■□ 3.32
SMARCD3-201ENST00000262188 ONECUT3O60422 494 aaPredicted RBP35.8■■■■□ 3.32
SMARCD3-201ENST00000262188 DUSP27Q5VZP5 1158 aa35.8■■■■□ 3.32
SMARCD3-201ENST00000262188 E9PSI1 815 aa35.79■■■■□ 3.32
SMARCD3-201ENST00000262188 RBM6P78332 1123 aaKnown RBP35.79■■■■□ 3.32
SMARCD3-201ENST00000262188 ADAMTS7Q9UKP4 1686 aa35.78■■■■□ 3.32
SMARCD3-201ENST00000262188 NKX1-1Q15270 411 aaPredicted RBP35.78■■■■□ 3.32
SMARCD3-201ENST00000262188 TOGARAM1Q9Y4F4 1720 aa35.77■■■■□ 3.32
SMARCD3-201ENST00000262188 HSP90AB1P08238 724 aaKnown RBP35.76■■■■□ 3.32
SMARCD3-201ENST00000262188 TEFQ10587 303 aa35.76■■■■□ 3.32
SMARCD3-201ENST00000262188 IL16Q14005 1332 aa35.76■■■■□ 3.32
SMARCD3-201ENST00000262188 ZNF853P0CG23 659 aa35.76■■■■□ 3.31
SMARCD3-201ENST00000262188 TRMT2AQ8IZ69 625 aaKnown RBP35.76■■■■□ 3.31
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms