RNA–Protein interactions for RNA: ENST00000262067.4

TSPAN13-201, Transcript of tetraspanin 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN13, Length 2,093 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN13-201ENST00000262067 USHBP1Q8N6Y0 703 aa30.65■■■□□ 2.5
TSPAN13-201ENST00000262067 DDX19BQ9UMR2 479 aa30.65■■■□□ 2.5
TSPAN13-201ENST00000262067 SLIT3O75094 1523 aa30.63■■■□□ 2.49
TSPAN13-201ENST00000262067 DCCP43146 1447 aa30.63■■■□□ 2.49
TSPAN13-201ENST00000262067 ARHGEF25Q86VW2 580 aa30.62■■■□□ 2.49
TSPAN13-201ENST00000262067 BACH2Q9BYV9 841 aa30.62■■■□□ 2.49
TSPAN13-201ENST00000262067 KRT24Q2M2I5 525 aa30.62■■■□□ 2.49
TSPAN13-201ENST00000262067 ARHGAP45Q92619 1136 aa30.62■■■□□ 2.49
TSPAN13-201ENST00000262067 USP19O94966 1318 aa30.62■■■□□ 2.49
TSPAN13-201ENST00000262067 NBPF6Q5VWK0 638 aa30.61■■■□□ 2.49
TSPAN13-201ENST00000262067 NBPF4Q96M43 638 aa30.61■■■□□ 2.49
TSPAN13-201ENST00000262067 HTATSF1O43719 755 aaKnown RBP30.6■■■□□ 2.49
TSPAN13-201ENST00000262067 MIS18AQ9NYP9 233 aa30.59■■■□□ 2.49
TSPAN13-201ENST00000262067 PHRF1Q9P1Y6 1649 aaKnown RBP30.59■■■□□ 2.49
TSPAN13-201ENST00000262067 RGS3P49796 1198 aa30.59■■■□□ 2.49
TSPAN13-201ENST00000262067 KIAA0232Q92628 1395 aa30.59■■■□□ 2.49
TSPAN13-201ENST00000262067 LMTK3Q96Q04 1460 aa30.58■■■□□ 2.49
TSPAN13-201ENST00000262067 GNAT3A8MTJ3 354 aa30.58■■■□□ 2.49
TSPAN13-201ENST00000262067 CADPS2Q86UW7 1296 aa30.58■■■□□ 2.49
TSPAN13-201ENST00000262067 DDX17Q92841 729 aaKnown RBP30.58■■■□□ 2.49
TSPAN13-201ENST00000262067 RWDD1Q9H446 243 aaPredicted RBP30.58■■■□□ 2.49
TSPAN13-201ENST00000262067 MSH6P52701 1360 aa30.55■■■□□ 2.48
TSPAN13-201ENST00000262067 ZBTB40Q9NUA8 1239 aa30.55■■■□□ 2.48
TSPAN13-201ENST00000262067 LRRC59Q96AG4 307 aaKnown RBP30.54■■■□□ 2.48
TSPAN13-201ENST00000262067 TSPYL4Q9UJ04 414 aa30.54■■■□□ 2.48
TSPAN13-201ENST00000262067 MAP3K5Q99683 1374 aa30.53■■■□□ 2.48
TSPAN13-201ENST00000262067 HAP1P54257 671 aaPredicted RBP30.53■■■□□ 2.48
TSPAN13-201ENST00000262067 IL17REQ8NFR9 667 aa30.52■■■□□ 2.48
TSPAN13-201ENST00000262067 MSH5O43196 834 aa30.51■■■□□ 2.48
TSPAN13-201ENST00000262067 ALS2Q96Q42 1657 aa30.51■■■□□ 2.47
TSPAN13-201ENST00000262067 STRCQ7RTU9 1775 aa30.51■■■□□ 2.47
TSPAN13-201ENST00000262067 ABCC4O15439 1325 aa30.5■■■□□ 2.47
TSPAN13-201ENST00000262067 AXIN2Q9Y2T1 843 aa30.5■■■□□ 2.47
TSPAN13-201ENST00000262067 API5Q9BZZ5 524 aaKnown RBP30.49■■■□□ 2.47
TSPAN13-201ENST00000262067 LRRC37A3O60309 1634 aa30.48■■■□□ 2.47
TSPAN13-201ENST00000262067 ANKRD24Q8TF21 1146 aa30.48■■■□□ 2.47
TSPAN13-201ENST00000262067 NPHP3Q7Z494 1330 aa30.47■■■□□ 2.47
TSPAN13-201ENST00000262067 RGPD2P0DJD1 1756 aa30.47■■■□□ 2.47
TSPAN13-201ENST00000262067 MED1Q15648 1581 aaPredicted RBP30.47■■■□□ 2.47
TSPAN13-201ENST00000262067 HDAC1Q13547 482 aaPredicted RBP30.47■■■□□ 2.47
TSPAN13-201ENST00000262067 ZBTB7BO15156 539 aaPredicted RBP30.46■■■□□ 2.47
TSPAN13-201ENST00000262067 ZC3H6P61129 1189 aaKnown RBP30.46■■■□□ 2.47
TSPAN13-201ENST00000262067 PDZRN3Q9UPQ7 1066 aa30.46■■■□□ 2.47
TSPAN13-201ENST00000262067 FAM161AQ3B820 660 aa30.44■■■□□ 2.46
TSPAN13-201ENST00000262067 XIRP1Q702N8 1843 aaKnown RBP30.44■■■□□ 2.46
TSPAN13-201ENST00000262067 TAF7Q15545 349 aaPredicted RBP30.42■■■□□ 2.46
TSPAN13-201ENST00000262067 C8orf34Q49A92 452 aa30.42■■■□□ 2.46
TSPAN13-201ENST00000262067 NCAPD2Q15021 1401 aa30.42■■■□□ 2.46
TSPAN13-201ENST00000262067 ANP32AP39687 249 aaKnown RBP30.42■■■□□ 2.46
TSPAN13-201ENST00000262067 ZNF335Q9H4Z2 1342 aaPredicted RBP30.42■■■□□ 2.46
TSPAN13-201ENST00000262067 CHMP4BQ9H444 224 aaKnown RBP30.41■■■□□ 2.46
TSPAN13-201ENST00000262067 BABAM1Q9NWV8 329 aa30.4■■■□□ 2.46
TSPAN13-201ENST00000262067 PXDNQ92626 1479 aa30.39■■■□□ 2.46
TSPAN13-201ENST00000262067 TNS3Q68CZ2 1445 aa30.39■■■□□ 2.46
TSPAN13-201ENST00000262067 SLC4A2P04920 1241 aa30.39■■■□□ 2.46
TSPAN13-201ENST00000262067 PLEKHO1Q53GL0 409 aaPredicted RBP30.39■■■□□ 2.46
TSPAN13-201ENST00000262067 CEMIPQ8WUJ3 1361 aa30.39■■■□□ 2.45
TSPAN13-201ENST00000262067 CABLES1Q8TDN4 633 aa30.38■■■□□ 2.45
TSPAN13-201ENST00000262067 LGR6Q9HBX8 967 aa30.38■■■□□ 2.45
TSPAN13-201ENST00000262067 RGS12O14924 1447 aa30.38■■■□□ 2.45
TSPAN13-201ENST00000262067 BRINP3Q76B58 766 aa30.37■■■□□ 2.45
TSPAN13-201ENST00000262067 NPM2Q86SE8 214 aaKnown RBP30.37■■■□□ 2.45
TSPAN13-201ENST00000262067 SPATA31A3Q5VYP0 1347 aa30.37■■■□□ 2.45
TSPAN13-201ENST00000262067 ZNF530Q6P9A1 599 aaPredicted RBP30.37■■■□□ 2.45
TSPAN13-201ENST00000262067 PTPRCP08575 1304 aa30.36■■■□□ 2.45
TSPAN13-201ENST00000262067 ERBB3P21860 1342 aa30.36■■■□□ 2.45
TSPAN13-201ENST00000262067 AMOTQ4VCS5 1084 aa30.36■■■□□ 2.45
TSPAN13-201ENST00000262067 AKAP4Q5JQC9 854 aa30.35■■■□□ 2.45
TSPAN13-201ENST00000262067 INTS3Q68E01 1043 aaKnown RBP30.35■■■□□ 2.45
TSPAN13-201ENST00000262067 SMC5Q8IY18 1101 aa30.35■■■□□ 2.45
TSPAN13-201ENST00000262067 C1orf115Q9H7X2 142 aa30.35■■■□□ 2.45
TSPAN13-201ENST00000262067 RGPD5Q99666 1765 aa30.34■■■□□ 2.45
TSPAN13-201ENST00000262067 CAMTA1Q9Y6Y1 1673 aa30.33■■■□□ 2.45
TSPAN13-201ENST00000262067 G2E3Q7L622 706 aa30.32■■■□□ 2.44
TSPAN13-201ENST00000262067 IPO9Q96P70 1041 aaKnown RBP30.31■■■□□ 2.44
TSPAN13-201ENST00000262067 SLAIN2Q9P270 581 aa30.31■■■□□ 2.44
TSPAN13-201ENST00000262067 MPRIPQ6WCQ1 1025 aa30.3■■■□□ 2.44
TSPAN13-201ENST00000262067 LMO7Q8WWI1 1683 aa30.29■■■□□ 2.44
TSPAN13-201ENST00000262067 CCDC30Q5VVM6 783 aa30.29■■■□□ 2.44
TSPAN13-201ENST00000262067 STK31Q9BXU1 1019 aa30.29■■■□□ 2.44
TSPAN13-201ENST00000262067 SOS1Q07889 1333 aaPredicted RBP30.28■■■□□ 2.44
TSPAN13-201ENST00000262067 C1orf141Q5JVX7 400 aa30.28■■■□□ 2.44
TSPAN13-201ENST00000262067 NLRP2Q9NX02 1062 aa30.27■■■□□ 2.44
TSPAN13-201ENST00000262067 CHRNA2Q15822 529 aa30.27■■■□□ 2.44
TSPAN13-201ENST00000262067 SIRT2Q8IXJ6 389 aa30.27■■■□□ 2.44
TSPAN13-201ENST00000262067 NECTIN2Q92692 538 aa30.27■■■□□ 2.44
TSPAN13-201ENST00000262067 COL18A1P39060 1754 aa30.26■■■□□ 2.43
TSPAN13-201ENST00000262067 RNMTO43148 476 aaKnown RBP30.26■■■□□ 2.43
TSPAN13-201ENST00000262067 TEFQ10587 303 aa30.25■■■□□ 2.43
TSPAN13-201ENST00000262067 EIF4A1P60842 406 aaKnown RBP30.23■■■□□ 2.43
TSPAN13-201ENST00000262067 NUCB1Q02818 461 aa30.23■■■□□ 2.43
TSPAN13-201ENST00000262067 CRYBG1Q9Y4K1 1723 aa30.23■■■□□ 2.43
TSPAN13-201ENST00000262067 F6X3S4 739 aa30.22■■■□□ 2.43
TSPAN13-201ENST00000262067 SOS2Q07890 1332 aaPredicted RBP30.21■■■□□ 2.43
TSPAN13-201ENST00000262067 KCNQ3O43525 872 aa30.21■■■□□ 2.43
TSPAN13-201ENST00000262067 CPDO75976 1380 aa30.21■■■□□ 2.43
TSPAN13-201ENST00000262067 BTBD11A6QL63 1104 aa30.21■■■□□ 2.43
TSPAN13-201ENST00000262067 CSB-PGBD3P0DP91 1061 aa30.21■■■□□ 2.43
TSPAN13-201ENST00000262067 RAPGEF4Q8WZA2 1011 aa30.21■■■□□ 2.43
TSPAN13-201ENST00000262067 FLIIQ13045 1269 aa30.2■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms