RNA–Protein interactions for RNA: ENST00000261917.3

HCN4-201, Transcript of hyperpolarization activated cyclic nucleotide gated potassium channel 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HCN4, Length 7,228 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCN4-201ENST00000261917 NCOA2Q15596 1464 aa21.33■■□□□ 1
HCN4-201ENST00000261917 NGLY1Q96IV0 654 aa21.32■■□□□ 1
HCN4-201ENST00000261917 LARP1BQ659C4 914 aaKnown RBP21.32■■□□□ 1
HCN4-201ENST00000261917 THUMPD2Q9BTF0 503 aaKnown RBP21.32■■□□□ 1
HCN4-201ENST00000261917 WDR70Q9NW82 654 aa21.32■■□□□ 1
HCN4-201ENST00000261917 NOL7Q9UMY1 257 aaKnown RBP21.32■■□□□ 1
HCN4-201ENST00000261917 MKNK2Q9HBH9 465 aa21.32■■□□□ 1
HCN4-201ENST00000261917 ZNF692Q9BU19 519 aaPredicted RBP21.32■■□□□ 1
HCN4-201ENST00000261917 PDRG1Q9NUG6 133 aa21.31■■□□□ 1
HCN4-201ENST00000261917 UBA5Q9GZZ9 404 aa21.31■■□□□ 1
HCN4-201ENST00000261917 GNAT3A8MTJ3 354 aa21.31■■□□□ 1
HCN4-201ENST00000261917 SMARCA5O60264 1052 aaPredicted RBP21.31■■□□□ 1
HCN4-201ENST00000261917 CA8P35219 290 aa21.31■■□□□ 1
HCN4-201ENST00000261917 TMEM87AQ8NBN3 555 aa21.31■■□□□ 1
HCN4-201ENST00000261917 PNISRQ8TF01 805 aaKnown RBP21.31■■□□□ 1
HCN4-201ENST00000261917 RPGRQ92834 1020 aaKnown RBP21.31■■□□□ 1
HCN4-201ENST00000261917 SYNJ2O15056 1496 aa21.31■■□□□ 1
HCN4-201ENST00000261917 KAT6BQ8WYB5 2073 aa21.31■■□□□ 1
HCN4-201ENST00000261917 CCDC96Q2M329 555 aa21.3■■□□□ 1
HCN4-201ENST00000261917 LETM1O95202 739 aaPredicted RBP21.3■■□□□ 1
HCN4-201ENST00000261917 DZIP1Q86YF9 867 aaKnown RBP21.3■■□□□ 1
HCN4-201ENST00000261917 GPTP24298 496 aa21.29■■□□□ 1
HCN4-201ENST00000261917 IGF1RP08069 1367 aa21.29■■□□□ 1
HCN4-201ENST00000261917 PDCP20941 246 aa21.29■■□□□ 1
HCN4-201ENST00000261917 PLCD3Q8N3E9 789 aa21.29■■□□□ 1
HCN4-201ENST00000261917 ERLIN2O94905 339 aa21.29■■□□□ 1
HCN4-201ENST00000261917 CAVIN4Q5BKX8 364 aa21.29■■□□□ 1
HCN4-201ENST00000261917 SEC63Q9UGP8 760 aaKnown RBP21.29■■□□□ 1
HCN4-201ENST00000261917 GCC1Q96CN9 775 aa21.28■■□□□ 1
HCN4-201ENST00000261917 CEP57L1Q8IYX8 460 aa21.28■■□□□ 1
HCN4-201ENST00000261917 TSPYL1Q9H0U9 437 aa21.28■■□□□ 1
HCN4-201ENST00000261917 ZNF652Q9Y2D9 606 aa21.28■■□□□ 1
HCN4-201ENST00000261917 BLOC1S2Q6QNY1 142 aa21.27■■□□□ 1
HCN4-201ENST00000261917 JMYQ8N9B5 988 aa21.27■■□□□ 1
HCN4-201ENST00000261917 CASTP20810 708 aaKnown RBP21.27■■□□□ 1
HCN4-201ENST00000261917 GUCY1B3Q02153 619 aa21.27■□□□□ 0.99
HCN4-201ENST00000261917 CAMK4Q16566 473 aa21.27■□□□□ 0.99
HCN4-201ENST00000261917 TTC16Q8NEE8 873 aa21.27■□□□□ 0.99
HCN4-201ENST00000261917 CFTRP13569 1480 aa21.27■□□□□ 0.99
HCN4-201ENST00000261917 BMP2KQ9NSY1 1161 aaPredicted RBP21.26■□□□□ 0.99
HCN4-201ENST00000261917 PSMD1Q99460 953 aa21.26■□□□□ 0.99
HCN4-201ENST00000261917 EXOC6BQ9Y2D4 811 aa21.26■□□□□ 0.99
HCN4-201ENST00000261917 ANKRD1Q15327 319 aa21.26■□□□□ 0.99
HCN4-201ENST00000261917 NUDT16Q96DE0 195 aaKnown RBP21.26■□□□□ 0.99
HCN4-201ENST00000261917 CT47B1P0C2W7 299 aaPredicted RBP21.26■□□□□ 0.99
HCN4-201ENST00000261917 BOLA2Q9H3K6 86 aa21.26■□□□□ 0.99
HCN4-201ENST00000261917 RBM10P98175 930 aaKnown RBP21.26■□□□□ 0.99
HCN4-201ENST00000261917 ZNF622Q969S3 477 aaKnown RBP eCLIP21.26■□□□□ 0.99
HCN4-201ENST00000261917 LRRC9Q6ZRR7 1453 aa21.26■□□□□ 0.99
HCN4-201ENST00000261917 TAF3Q5VWG9 929 aa21.25■□□□□ 0.99
HCN4-201ENST00000261917 ERCC4Q92889 916 aaPredicted RBP21.25■□□□□ 0.99
HCN4-201ENST00000261917 LRRFIP2Q9Y608 721 aaKnown RBP21.25■□□□□ 0.99
HCN4-201ENST00000261917 RANBP6O60518 1105 aaKnown RBP21.25■□□□□ 0.99
HCN4-201ENST00000261917 IMMTQ16891 758 aaKnown RBP21.25■□□□□ 0.99
HCN4-201ENST00000261917 CCDC191Q8NCU4 936 aa21.24■□□□□ 0.99
HCN4-201ENST00000261917 SPATA32Q96LK8 384 aa21.24■□□□□ 0.99
HCN4-201ENST00000261917 RABEP1Q15276 862 aa21.24■□□□□ 0.99
HCN4-201ENST00000261917 CHD1LQ86WJ1 897 aa21.24■□□□□ 0.99
HCN4-201ENST00000261917 CCDC144CPQ8IYA2 1237 aa21.23■□□□□ 0.99
HCN4-201ENST00000261917 LARP6Q9BRS8 491 aaKnown RBP21.23■□□□□ 0.99
HCN4-201ENST00000261917 BRD4O60885 1362 aaPredicted RBP21.23■□□□□ 0.99
HCN4-201ENST00000261917 C6orf229H3BNL8 230 aa21.23■□□□□ 0.99
HCN4-201ENST00000261917 DACH1Q9UI36 760 aa21.23■□□□□ 0.99
HCN4-201ENST00000261917 GOLGA6L10A6NI86 522 aa21.23■□□□□ 0.99
HCN4-201ENST00000261917 AKNAQ7Z591 1439 aa21.23■□□□□ 0.99
HCN4-201ENST00000261917 JARID2Q92833 1246 aaPredicted RBP21.23■□□□□ 0.99
HCN4-201ENST00000261917 C9orf84Q5VXU9 1444 aa21.22■□□□□ 0.99
HCN4-201ENST00000261917 CEBPAP49715 358 aaPredicted RBP21.22■□□□□ 0.99
HCN4-201ENST00000261917 VAT1LQ9HCJ6 419 aa21.22■□□□□ 0.99
HCN4-201ENST00000261917 TRMT112Q9UI30 125 aaKnown RBP21.22■□□□□ 0.99
HCN4-201ENST00000261917 PIP4K2AP48426 406 aaPredicted RBP21.22■□□□□ 0.99
HCN4-201ENST00000261917 ZRSR2Q15696 482 aaKnown RBP21.22■□□□□ 0.99
HCN4-201ENST00000261917 FOXO3O43524 673 aa21.22■□□□□ 0.99
HCN4-201ENST00000261917 TMX1Q9H3N1 280 aa21.22■□□□□ 0.99
HCN4-201ENST00000261917 KIF21BO75037 1637 aa21.22■□□□□ 0.99
HCN4-201ENST00000261917 TNIP1Q15025 636 aa21.21■□□□□ 0.99
HCN4-201ENST00000261917 KIAA1328Q86T90 577 aa21.21■□□□□ 0.99
HCN4-201ENST00000261917 TNNT1P13805 278 aa21.21■□□□□ 0.99
HCN4-201ENST00000261917 AEBP1Q8IUX7 1158 aa21.21■□□□□ 0.99
HCN4-201ENST00000261917 EIF5P55010 431 aaKnown RBP21.21■□□□□ 0.99
HCN4-201ENST00000261917 KLHL10Q6JEL2 608 aa21.21■□□□□ 0.99
HCN4-201ENST00000261917 CDKL5O76039 1030 aa21.21■□□□□ 0.99
HCN4-201ENST00000261917 CALRP27797 417 aaKnown RBP21.21■□□□□ 0.99
HCN4-201ENST00000261917 DNA2P51530 1060 aa21.21■□□□□ 0.99
HCN4-201ENST00000261917 DUSP27Q5VZP5 1158 aa21.2■□□□□ 0.98
HCN4-201ENST00000261917 CCDC8Q9H0W5 538 aaPredicted RBP21.2■□□□□ 0.98
HCN4-201ENST00000261917 CCDC192P0DO97 292 aa21.2■□□□□ 0.98
HCN4-201ENST00000261917 GBP2P32456 591 aaPredicted RBP21.2■□□□□ 0.98
HCN4-201ENST00000261917 MCM2P49736 904 aa21.2■□□□□ 0.98
HCN4-201ENST00000261917 ATF7IPQ6VMQ6 1270 aa21.2■□□□□ 0.98
HCN4-201ENST00000261917 NESP48681 1621 aa21.2■□□□□ 0.98
HCN4-201ENST00000261917 DESP17661 470 aa21.19■□□□□ 0.98
HCN4-201ENST00000261917 ZNF444Q8N0Y2 327 aaPredicted RBP21.19■□□□□ 0.98
HCN4-201ENST00000261917 KRT85P78386 507 aa21.19■□□□□ 0.98
HCN4-201ENST00000261917 PPP4R3AQ6IN85 833 aa21.19■□□□□ 0.98
HCN4-201ENST00000261917 ACSBG1Q96GR2 724 aa21.18■□□□□ 0.98
HCN4-201ENST00000261917 CTNNA3Q9UI47 895 aa21.18■□□□□ 0.98
HCN4-201ENST00000261917 PPFIA3O75145 1194 aa21.18■□□□□ 0.98
HCN4-201ENST00000261917 IFIT1P09914 478 aaKnown RBP21.18■□□□□ 0.98
HCN4-201ENST00000261917 ANKRD18AQ8IVF6 992 aa21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms