RNA–Protein interactions for RNA: ENST00000261609.11

HERC2-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC2, Length 15,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-201ENST00000261609 CEP57Q86XR8 500 aa8.39□□□□□ -1.07
HERC2-201ENST00000261609 TMX1Q9H3N1 280 aa8.39□□□□□ -1.07
HERC2-201ENST00000261609 FGD6Q6ZV73 1430 aa8.39□□□□□ -1.07
HERC2-201ENST00000261609 MYOM3Q5VTT5 1437 aa8.39□□□□□ -1.07
HERC2-201ENST00000261609 C1orf115Q9H7X2 142 aa8.38□□□□□ -1.07
HERC2-201ENST00000261609 ARFGAP3Q9NP61 516 aa8.38□□□□□ -1.07
HERC2-201ENST00000261609 SARNPP82979 210 aaKnown RBP8.38□□□□□ -1.07
HERC2-201ENST00000261609 ZFYVE27Q5T4F4 411 aa8.38□□□□□ -1.07
HERC2-201ENST00000261609 PDRG1Q9NUG6 133 aa8.38□□□□□ -1.07
HERC2-201ENST00000261609 CCDC83Q8IWF9 413 aa8.38□□□□□ -1.07
HERC2-201ENST00000261609 RBM28Q9NW13 759 aaKnown RBP8.38□□□□□ -1.07
HERC2-201ENST00000261609 BAG4O95429 457 aaKnown RBP8.38□□□□□ -1.07
HERC2-201ENST00000261609 CCDC184Q52MB2 194 aa8.38□□□□□ -1.07
HERC2-201ENST00000261609 C10orf67Q8IYJ2 551 aa8.38□□□□□ -1.07
HERC2-201ENST00000261609 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.38□□□□□ -1.078e-7■■■■■ 158.5
HERC2-201ENST00000261609 EZRP15311 586 aaKnown RBP8.38□□□□□ -1.07
HERC2-201ENST00000261609 GSDMDP57764 484 aa8.38□□□□□ -1.07
HERC2-201ENST00000261609 PPP6R1Q9UPN7 881 aa8.38□□□□□ -1.07
HERC2-201ENST00000261609 CFAP100Q494V2 611 aa8.38□□□□□ -1.07
HERC2-201ENST00000261609 CCDC30Q5VVM6 783 aa8.37□□□□□ -1.07
HERC2-201ENST00000261609 DRC1Q96MC2 740 aa8.37□□□□□ -1.07
HERC2-201ENST00000261609 HMOX1P09601 288 aa8.37□□□□□ -1.07
HERC2-201ENST00000261609 MICALL1Q8N3F8 863 aa8.37□□□□□ -1.07
HERC2-201ENST00000261609 MINK1Q8N4C8 1332 aaPredicted RBP8.37□□□□□ -1.07
HERC2-201ENST00000261609 CPSF2Q9P2I0 782 aaKnown RBP8.37□□□□□ -1.07
HERC2-201ENST00000261609 HSPA4P34932 840 aa8.37□□□□□ -1.07
HERC2-201ENST00000261609 IMMTQ16891 758 aaKnown RBP8.37□□□□□ -1.07
HERC2-201ENST00000261609 CDK5RAP3Q96JB5 506 aa8.37□□□□□ -1.07
HERC2-201ENST00000261609 ANO10Q9NW15 660 aa8.37□□□□□ -1.07
HERC2-201ENST00000261609 OTUD6BQ8N6M0 293 aa8.37□□□□□ -1.07
HERC2-201ENST00000261609 SCAPERQ9BY12 1400 aa8.37□□□□□ -1.07
HERC2-201ENST00000261609 PLEKHH1Q9ULM0 1364 aa8.37□□□□□ -1.07
HERC2-201ENST00000261609 KRBA2Q6ZNG9 492 aa8.37□□□□□ -1.07
HERC2-201ENST00000261609 RIC3Q7Z5B4 369 aa8.37□□□□□ -1.07
HERC2-201ENST00000261609 TBC1D2BQ9UPU7 963 aa8.37□□□□□ -1.07
HERC2-201ENST00000261609 KLHL34Q8N239 644 aa8.37□□□□□ -1.07
HERC2-201ENST00000261609 NEUROD6Q96NK8 337 aa8.37□□□□□ -1.07
HERC2-201ENST00000261609 CCT4P50991 539 aaKnown RBP8.36□□□□□ -1.07
HERC2-201ENST00000261609 CEP63Q96MT8 703 aa8.36□□□□□ -1.07
HERC2-201ENST00000261609 CTAGE5O15320 804 aa8.36□□□□□ -1.07
HERC2-201ENST00000261609 RAD21O60216 631 aa8.36□□□□□ -1.07
HERC2-201ENST00000261609 SNW1Q13573 536 aaKnown RBP8.36□□□□□ -1.07
HERC2-201ENST00000261609 CTDP1Q9Y5B0 961 aaPredicted RBP8.36□□□□□ -1.07
HERC2-201ENST00000261609 MTHFSP49914 203 aa8.36□□□□□ -1.07
HERC2-201ENST00000261609 CAPN2P17655 700 aa8.36□□□□□ -1.07
HERC2-201ENST00000261609 BANK1Q8NDB2 785 aa8.36□□□□□ -1.07
HERC2-201ENST00000261609 SRRTQ9BXP5 876 aaKnown RBP8.36□□□□□ -1.07
HERC2-201ENST00000261609 ZKSCAN5Q9Y2L8 839 aa8.36□□□□□ -1.07
HERC2-201ENST00000261609 TAF4BQ92750 862 aa8.36□□□□□ -1.07
HERC2-201ENST00000261609 V9GYY5 206 aaPredicted RBP8.36□□□□□ -1.07
HERC2-201ENST00000261609 IFFO1Q0D2I5 559 aa8.36□□□□□ -1.07
HERC2-201ENST00000261609 STK3Q13188 491 aa8.36□□□□□ -1.07
HERC2-201ENST00000261609 ZNF397Q8NF99 534 aaPredicted RBP8.36□□□□□ -1.07
HERC2-201ENST00000261609 TOP1P11387 765 aaKnown RBP8.35□□□□□ -1.07
HERC2-201ENST00000261609 SCLT1Q96NL6 688 aa8.35□□□□□ -1.07
HERC2-201ENST00000261609 TBC1D32Q96NH3 1257 aa8.35□□□□□ -1.07
HERC2-201ENST00000261609 CCDC175P0C221 793 aa8.35□□□□□ -1.07
HERC2-201ENST00000261609 CKAP2LQ8IYA6 745 aa8.35□□□□□ -1.07
HERC2-201ENST00000261609 CCAR1Q8IX12 1150 aaKnown RBP8.35□□□□□ -1.07
HERC2-201ENST00000261609 ZSWIM4Q9H7M6 989 aa8.35□□□□□ -1.07
HERC2-201ENST00000261609 EBAG9O00559 213 aa8.35□□□□□ -1.07
HERC2-201ENST00000261609 SLC3A2P08195 630 aaKnown RBP8.35□□□□□ -1.07
HERC2-201ENST00000261609 PRIM1P49642 420 aaKnown RBP8.35□□□□□ -1.07
HERC2-201ENST00000261609 NUTM2FA1L443 756 aa8.35□□□□□ -1.07
HERC2-201ENST00000261609 TDRD9Q8NDG6 1382 aaKnown RBP8.35□□□□□ -1.07
HERC2-201ENST00000261609 CDKL5O76039 1030 aa8.35□□□□□ -1.07
HERC2-201ENST00000261609 GNG11P61952 73 aa8.35□□□□□ -1.07
HERC2-201ENST00000261609 EXOSC9Q06265 439 aaKnown RBP8.35□□□□□ -1.07
HERC2-201ENST00000261609 TRIM22Q8IYM9 498 aa8.35□□□□□ -1.07
HERC2-201ENST00000261609 SKILP12757 684 aa8.35□□□□□ -1.07
HERC2-201ENST00000261609 KLHL40Q2TBA0 621 aa8.35□□□□□ -1.07
HERC2-201ENST00000261609 PAIP2Q9BPZ3 127 aaKnown RBP8.34□□□□□ -1.07
HERC2-201ENST00000261609 SH2B1Q9NRF2 756 aaPredicted RBP8.34□□□□□ -1.07
HERC2-201ENST00000261609 ATP2C2O75185 946 aa8.34□□□□□ -1.07
HERC2-201ENST00000261609 LRSAM1Q6UWE0 723 aa8.34□□□□□ -1.07
HERC2-201ENST00000261609 SPA17Q15506 151 aa8.34□□□□□ -1.07
HERC2-201ENST00000261609 ATF7IPQ6VMQ6 1270 aa8.34□□□□□ -1.07
HERC2-201ENST00000261609 NAA25Q14CX7 972 aa8.34□□□□□ -1.07
HERC2-201ENST00000261609 SYCP1Q15431 976 aa8.34□□□□□ -1.07
HERC2-201ENST00000261609 PDS5BQ9NTI5 1447 aa8.34□□□□□ -1.07
HERC2-201ENST00000261609 GAS2L2Q8NHY3 880 aa8.34□□□□□ -1.07
HERC2-201ENST00000261609 SCAND2PQ9GZW5 306 aaPredicted RBP8.34□□□□□ -1.07
HERC2-201ENST00000261609 JAKMIP1Q96N16 626 aaKnown RBP8.34□□□□□ -1.07
HERC2-201ENST00000261609 CCDC121Q6ZUS5 278 aa8.34□□□□□ -1.07
HERC2-201ENST00000261609 SPATA24Q86W54 205 aa8.34□□□□□ -1.07
HERC2-201ENST00000261609 C20orf194Q5TEA3 1177 aa8.34□□□□□ -1.08
HERC2-201ENST00000261609 TERF1P54274 439 aa8.33□□□□□ -1.08
HERC2-201ENST00000261609 KRT32Q14532 448 aa8.33□□□□□ -1.08
HERC2-201ENST00000261609 TWISTNBQ3B726 338 aaPredicted RBP8.33□□□□□ -1.08
HERC2-201ENST00000261609 GBP6Q6ZN66 633 aa8.33□□□□□ -1.08
HERC2-201ENST00000261609 WDR97A6NE52 1622 aa8.33□□□□□ -1.08
HERC2-201ENST00000261609 TSR2Q969E8 191 aaKnown RBP8.33□□□□□ -1.08
HERC2-201ENST00000261609 NOL7Q9UMY1 257 aaKnown RBP8.33□□□□□ -1.08
HERC2-201ENST00000261609 CASTP20810 708 aaKnown RBP8.33□□□□□ -1.08
HERC2-201ENST00000261609 KIF21BO75037 1637 aa8.33□□□□□ -1.08
HERC2-201ENST00000261609 PLEKHH2Q8IVE3 1493 aa8.33□□□□□ -1.08
HERC2-201ENST00000261609 CCDC113Q9H0I3 377 aa8.33□□□□□ -1.08
HERC2-201ENST00000261609 TTC12Q9H892 705 aaPredicted RBP8.33□□□□□ -1.08
HERC2-201ENST00000261609 LRCH2Q5VUJ6 765 aa8.33□□□□□ -1.08
HERC2-201ENST00000261609 CCDC171Q6TFL3 1326 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms