RNA–Protein interactions for RNA: ENST00000261517.9

VPS13C-202, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 13,400 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-202ENST00000261517 WASLO00401 505 aaPredicted RBP5.13□□□□□ -1.59
VPS13C-202ENST00000261517 RNF41Q9H4P4 317 aaPredicted RBP5.13□□□□□ -1.59
VPS13C-202ENST00000261517 PRKAR2BP31323 418 aa5.13□□□□□ -1.59
VPS13C-202ENST00000261517 ABCA8O94911 1581 aa5.12□□□□□ -1.59
VPS13C-202ENST00000261517 FGFR1OPO95684 399 aaKnown RBP5.12□□□□□ -1.59
VPS13C-202ENST00000261517 ESCO1Q5FWF5 840 aa5.12□□□□□ -1.59
VPS13C-202ENST00000261517 KIF1BPQ96EK5 621 aa5.12□□□□□ -1.59
VPS13C-202ENST00000261517 EHMT1Q9H9B1 1298 aa5.12□□□□□ -1.59
VPS13C-202ENST00000261517 WDHD1O75717 1129 aaPredicted RBP5.12□□□□□ -1.59
VPS13C-202ENST00000261517 U3KPZ7 1027 aaPredicted RBP5.12□□□□□ -1.59
VPS13C-202ENST00000261517 POLR3AO14802 1390 aaPredicted RBP5.12□□□□□ -1.59
VPS13C-202ENST00000261517 CTAGE5O15320 804 aa5.12□□□□□ -1.59
VPS13C-202ENST00000261517 CYP46A1Q9Y6A2 500 aa5.12□□□□□ -1.59
VPS13C-202ENST00000261517 KINO60870 393 aaKnown RBP5.12□□□□□ -1.59
VPS13C-202ENST00000261517 HMG20BQ9P0W2 317 aa5.12□□□□□ -1.59
VPS13C-202ENST00000261517 R3HCC1Q9Y3T6 440 aaKnown RBP5.12□□□□□ -1.59
VPS13C-202ENST00000261517 GLRX3O76003 335 aaKnown RBP5.12□□□□□ -1.59
VPS13C-202ENST00000261517 SMC2O95347 1197 aa5.12□□□□□ -1.59
VPS13C-202ENST00000261517 ZNF530Q6P9A1 599 aaPredicted RBP5.12□□□□□ -1.59
VPS13C-202ENST00000261517 CABP2Q9NPB3 220 aa5.12□□□□□ -1.59
VPS13C-202ENST00000261517 KIF20AO95235 890 aa5.12□□□□□ -1.59
VPS13C-202ENST00000261517 PIK3R4Q99570 1358 aa5.12□□□□□ -1.59
VPS13C-202ENST00000261517 TAF7Q15545 349 aaPredicted RBP5.12□□□□□ -1.59
VPS13C-202ENST00000261517 NUDT16Q96DE0 195 aaKnown RBP5.12□□□□□ -1.59
VPS13C-202ENST00000261517 BMP15O95972 392 aa5.12□□□□□ -1.59
VPS13C-202ENST00000261517 KLHL34Q8N239 644 aa5.12□□□□□ -1.59
VPS13C-202ENST00000261517 ZFYVE16Q7Z3T8 1539 aa5.12□□□□□ -1.59
VPS13C-202ENST00000261517 SPTY2D1Q68D10 685 aaPredicted RBP5.12□□□□□ -1.59
VPS13C-202ENST00000261517 ADAMTS8Q9UP79 889 aa5.12□□□□□ -1.59
VPS13C-202ENST00000261517 DEKP35659 375 aaKnown RBP5.12□□□□□ -1.59
VPS13C-202ENST00000261517 GSE1Q14687 1217 aa5.12□□□□□ -1.59
VPS13C-202ENST00000261517 ZGPATQ8N5A5 531 aaKnown RBP5.12□□□□□ -1.59
VPS13C-202ENST00000261517 RBM27Q9P2N5 1060 aaKnown RBP5.12□□□□□ -1.59
VPS13C-202ENST00000261517 TUBB4BP68371 445 aa5.12□□□□□ -1.59
VPS13C-202ENST00000261517 SMARCC1Q92922 1105 aaPredicted RBP5.12□□□□□ -1.59
VPS13C-202ENST00000261517 APPP05067 770 aa5.11□□□□□ -1.59
VPS13C-202ENST00000261517 NPHP3Q7Z494 1330 aa5.11□□□□□ -1.59
VPS13C-202ENST00000261517 CHD1O14646 1710 aa5.11□□□□□ -1.59
VPS13C-202ENST00000261517 HECW2Q9P2P5 1572 aa5.11□□□□□ -1.59
VPS13C-202ENST00000261517 DCTN1Q14203 1278 aa5.11□□□□□ -1.59
VPS13C-202ENST00000261517 COG6Q9Y2V7 657 aa5.11□□□□□ -1.59
VPS13C-202ENST00000261517 RIMS2Q9UQ26 1411 aa5.11□□□□□ -1.59
VPS13C-202ENST00000261517 EPB41L2O43491 1005 aaKnown RBP5.11□□□□□ -1.59
VPS13C-202ENST00000261517 WASHC4Q2M389 1173 aa5.11□□□□□ -1.59
VPS13C-202ENST00000261517 ZNHIT6Q9NWK9 470 aaKnown RBP5.11□□□□□ -1.59
VPS13C-202ENST00000261517 CCDC12Q8WUD4 166 aaPredicted RBP5.11□□□□□ -1.59
VPS13C-202ENST00000261517 DNAJC2Q99543 621 aaKnown RBP5.11□□□□□ -1.59
VPS13C-202ENST00000261517 CFAP65Q6ZU64 1925 aaKnown RBP5.11□□□□□ -1.59
VPS13C-202ENST00000261517 IGHMBP2P38935 993 aaKnown RBP5.11□□□□□ -1.59
VPS13C-202ENST00000261517 FSD1Q9BTV5 496 aa5.11□□□□□ -1.59
VPS13C-202ENST00000261517 HOXB7P09629 217 aa5.11□□□□□ -1.59
VPS13C-202ENST00000261517 BICD2Q8TD16 824 aa5.11□□□□□ -1.59
VPS13C-202ENST00000261517 LRRC27Q9C0I9 530 aa5.11□□□□□ -1.59
VPS13C-202ENST00000261517 MAGEC2Q9UBF1 373 aaPredicted RBP5.11□□□□□ -1.59
VPS13C-202ENST00000261517 KIF24Q5T7B8 1368 aa5.11□□□□□ -1.59
VPS13C-202ENST00000261517 TTC39AQ5SRH9 613 aa5.11□□□□□ -1.59
VPS13C-202ENST00000261517 FMNL3Q8IVF7 1028 aa5.11□□□□□ -1.59
VPS13C-202ENST00000261517 CAGE1Q8TC20 777 aa5.11□□□□□ -1.59
VPS13C-202ENST00000261517 TICAM2Q86XR7 235 aa5.11□□□□□ -1.59
VPS13C-202ENST00000261517 TMPOP42166 694 aaKnown RBP5.1□□□□□ -1.59
VPS13C-202ENST00000261517 EPS15P42566 896 aa5.1□□□□□ -1.59
VPS13C-202ENST00000261517 MPHOSPH6Q99547 160 aaKnown RBP5.1□□□□□ -1.59
VPS13C-202ENST00000261517 RAB34Q9BZG1 259 aa5.1□□□□□ -1.59
VPS13C-202ENST00000261517 BMP2KQ9NSY1 1161 aaPredicted RBP5.1□□□□□ -1.59
VPS13C-202ENST00000261517 DBF4Q9UBU7 674 aaPredicted RBP5.1□□□□□ -1.59
VPS13C-202ENST00000261517 MYOM2P54296 1465 aa5.1□□□□□ -1.59
VPS13C-202ENST00000261517 EIF2S2P20042 333 aaKnown RBP5.1□□□□□ -1.59
VPS13C-202ENST00000261517 MCM3P25205 808 aa5.1□□□□□ -1.59
VPS13C-202ENST00000261517 NT5C2P49902 561 aa5.1□□□□□ -1.59
VPS13C-202ENST00000261517 SLFN5Q08AF3 891 aa5.1□□□□□ -1.59
VPS13C-202ENST00000261517 MPHOSPH8Q99549 860 aa5.1□□□□□ -1.59
VPS13C-202ENST00000261517 TMOD2Q9NZR1 351 aa5.1□□□□□ -1.59
VPS13C-202ENST00000261517 APBB1O00213 710 aa5.1□□□□□ -1.59
VPS13C-202ENST00000261517 TUBB4AP04350 444 aa5.1□□□□□ -1.59
VPS13C-202ENST00000261517 ZFYP08048 801 aaPredicted RBP5.1□□□□□ -1.59
VPS13C-202ENST00000261517 NOS1P29475 1434 aa5.1□□□□□ -1.59
VPS13C-202ENST00000261517 PRDM11Q9NQV5 511 aa5.1□□□□□ -1.59
VPS13C-202ENST00000261517 PODXL2Q9NZ53 605 aa5.1□□□□□ -1.59
VPS13C-202ENST00000261517 CEP126Q9P2H0 1117 aa5.1□□□□□ -1.59
VPS13C-202ENST00000261517 SYNMO15061 1565 aa5.1□□□□□ -1.59
VPS13C-202ENST00000261517 PLEKHG5O94827 1062 aa5.1□□□□□ -1.59
VPS13C-202ENST00000261517 ERLIN2O94905 339 aa5.1□□□□□ -1.59
VPS13C-202ENST00000261517 TMED8Q6PL24 325 aaPredicted RBP5.1□□□□□ -1.59
VPS13C-202ENST00000261517 DISP1Q96F81 1524 aa5.1□□□□□ -1.59
VPS13C-202ENST00000261517 ANKRD18AQ8IVF6 992 aa5.1□□□□□ -1.59
VPS13C-202ENST00000261517 CABP1Q9NZU7 370 aa5.1□□□□□ -1.59
VPS13C-202ENST00000261517 MCTP1Q6DN14 999 aa5.1□□□□□ -1.59
VPS13C-202ENST00000261517 EDC4Q6P2E9 1401 aaKnown RBP5.1□□□□□ -1.59
VPS13C-202ENST00000261517 BTBD11A6QL63 1104 aa5.1□□□□□ -1.59
VPS13C-202ENST00000261517 CCDC192P0DO97 292 aa5.1□□□□□ -1.59
VPS13C-202ENST00000261517 TNIP1Q15025 636 aa5.1□□□□□ -1.59
VPS13C-202ENST00000261517 SLKQ9H2G2 1235 aaPredicted RBP5.1□□□□□ -1.59
VPS13C-202ENST00000261517 ZC3H13Q5T200 1668 aaKnown RBP5.1□□□□□ -1.59
VPS13C-202ENST00000261517 CCAR1Q8IX12 1150 aaKnown RBP5.1□□□□□ -1.59
VPS13C-202ENST00000261517 CDK5RAP3Q96JB5 506 aa5.1□□□□□ -1.59
VPS13C-202ENST00000261517 SMTNL1A8MU46 457 aa5.1□□□□□ -1.59
VPS13C-202ENST00000261517 CROCC2H7BZ55 1655 aa5.1□□□□□ -1.59
VPS13C-202ENST00000261517 GSTO1P78417 241 aa5.09□□□□□ -1.59
VPS13C-202ENST00000261517 NOM1Q5C9Z4 860 aaKnown RBP5.09□□□□□ -1.59
VPS13C-202ENST00000261517 VPS53Q5VIR6 699 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms