RNA–Protein interactions for RNA: ENST00000261367.11

SNCAIP-201, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SNCAIP, Length 4,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-201ENST00000261367 SDF4Q9BRK5 362 aa9.83□□□□□ -0.84
SNCAIP-201ENST00000261367 UNC13BO14795 1591 aa9.83□□□□□ -0.84
SNCAIP-201ENST00000261367 BAG4O95429 457 aaKnown RBP9.82□□□□□ -0.84
SNCAIP-201ENST00000261367 PPM1EQ8WY54 764 aa9.82□□□□□ -0.84
SNCAIP-201ENST00000261367 BRMS1Q9HCU9 246 aa9.82□□□□□ -0.84
SNCAIP-201ENST00000261367 SPDYE4A6NLX3 237 aa9.82□□□□□ -0.84
SNCAIP-201ENST00000261367 NEK4P51957 841 aa9.82□□□□□ -0.84
SNCAIP-201ENST00000261367 BCL11BQ9C0K0 894 aaPredicted RBP9.82□□□□□ -0.84
SNCAIP-201ENST00000261367 LRPPRCP42704 1394 aaKnown RBP9.82□□□□□ -0.84
SNCAIP-201ENST00000261367 SARNPP82979 210 aaKnown RBP9.82□□□□□ -0.84
SNCAIP-201ENST00000261367 TRIM29Q14134 588 aa9.82□□□□□ -0.84
SNCAIP-201ENST00000261367 CCDC148Q8NFR7 591 aa9.82□□□□□ -0.84
SNCAIP-201ENST00000261367 CFAP45Q9UL16 551 aa9.82□□□□□ -0.84
SNCAIP-201ENST00000261367 A0A1B0GUA9 196 aa9.82□□□□□ -0.84
SNCAIP-201ENST00000261367 SFPQP23246 707 aaKnown RBP eCLIP9.82□□□□□ -0.84
SNCAIP-201ENST00000261367 SMC5Q8IY18 1101 aa9.82□□□□□ -0.84
SNCAIP-201ENST00000261367 PLA2R1Q13018 1463 aa9.81□□□□□ -0.84
SNCAIP-201ENST00000261367 CPSF2Q9P2I0 782 aaKnown RBP9.81□□□□□ -0.84
SNCAIP-201ENST00000261367 PPP6R1Q9UPN7 881 aa9.81□□□□□ -0.84
SNCAIP-201ENST00000261367 MYO5CQ9NQX4 1742 aa9.81□□□□□ -0.84
SNCAIP-201ENST00000261367 NKTRP30414 1462 aaKnown RBP9.81□□□□□ -0.84
SNCAIP-201ENST00000261367 ADCY5O95622 1261 aa9.81□□□□□ -0.84
SNCAIP-201ENST00000261367 GBP2P32456 591 aaPredicted RBP9.81□□□□□ -0.84
SNCAIP-201ENST00000261367 SYNE3Q6ZMZ3 975 aa9.81□□□□□ -0.84
SNCAIP-201ENST00000261367 JMYQ8N9B5 988 aa9.81□□□□□ -0.84
SNCAIP-201ENST00000261367 PPP1R9BQ96SB3 815 aa9.81□□□□□ -0.84
SNCAIP-201ENST00000261367 LUC7LQ9NQ29 371 aaKnown RBP9.81□□□□□ -0.84
SNCAIP-201ENST00000261367 DDX19AQ9NUU7 478 aaKnown RBP9.81□□□□□ -0.84
SNCAIP-201ENST00000261367 CARMIL2Q6F5E8 1435 aa9.81□□□□□ -0.84
SNCAIP-201ENST00000261367 KIAA1107Q9UPP5 1409 aa9.81□□□□□ -0.84
SNCAIP-201ENST00000261367 SLU7O95391 586 aaKnown RBP9.81□□□□□ -0.84
SNCAIP-201ENST00000261367 CCDC50Q8IVM0 306 aa9.81□□□□□ -0.84
SNCAIP-201ENST00000261367 SRCIN1Q9C0H9 1055 aa9.81□□□□□ -0.84
SNCAIP-201ENST00000261367 ZCCHC11Q5TAX3 1644 aaKnown RBP9.81□□□□□ -0.84
SNCAIP-201ENST00000261367 EZRP15311 586 aaKnown RBP9.81□□□□□ -0.84
SNCAIP-201ENST00000261367 GNAI1P63096 354 aa9.81□□□□□ -0.84
SNCAIP-201ENST00000261367 CHD1LQ86WJ1 897 aa9.81□□□□□ -0.84
SNCAIP-201ENST00000261367 CASQ1P31415 396 aa9.8□□□□□ -0.84
SNCAIP-201ENST00000261367 C9orf84Q5VXU9 1444 aa9.8□□□□□ -0.84
SNCAIP-201ENST00000261367 RAB3GAP1Q15042 981 aa9.8□□□□□ -0.84
SNCAIP-201ENST00000261367 POTEDQ86YR6 584 aa9.8□□□□□ -0.84
SNCAIP-201ENST00000261367 ERC1Q8IUD2 1116 aa9.8□□□□□ -0.84
SNCAIP-201ENST00000261367 UHRF1BP1Q6BDS2 1440 aa9.8□□□□□ -0.84
SNCAIP-201ENST00000261367 LMAN1P49257 510 aa9.8□□□□□ -0.84
SNCAIP-201ENST00000261367 SYCP1Q15431 976 aa9.8□□□□□ -0.84
SNCAIP-201ENST00000261367 PAXIP1Q6ZW49 1069 aaPredicted RBP9.8□□□□□ -0.84
SNCAIP-201ENST00000261367 FMNL3Q8IVF7 1028 aa9.8□□□□□ -0.84
SNCAIP-201ENST00000261367 SCAND2PQ9GZW5 306 aaPredicted RBP9.8□□□□□ -0.84
SNCAIP-201ENST00000261367 ANO10Q9NW15 660 aa9.8□□□□□ -0.84
SNCAIP-201ENST00000261367 BCCIPQ9P287 314 aaKnown RBP eCLIP9.8□□□□□ -0.84
SNCAIP-201ENST00000261367 SMARCC1Q92922 1105 aaPredicted RBP9.8□□□□□ -0.84
SNCAIP-201ENST00000261367 USP25Q9UHP3 1055 aa9.8□□□□□ -0.84
SNCAIP-201ENST00000261367 INSRP06213 1382 aa9.79□□□□□ -0.84
SNCAIP-201ENST00000261367 ZNF445P59923 1031 aa9.79□□□□□ -0.84
SNCAIP-201ENST00000261367 SLFN5Q08AF3 891 aa9.79□□□□□ -0.84
SNCAIP-201ENST00000261367 PPFIBP1Q86W92 1011 aa9.79□□□□□ -0.84
SNCAIP-201ENST00000261367 RBM33Q96EV2 1170 aaKnown RBP9.79□□□□□ -0.84
SNCAIP-201ENST00000261367 CDCA7LQ96GN5 454 aa9.79□□□□□ -0.84
SNCAIP-201ENST00000261367 ERO1AQ96HE7 468 aa9.79□□□□□ -0.84
SNCAIP-201ENST00000261367 ARFGAP3Q9NP61 516 aa9.79□□□□□ -0.84
SNCAIP-201ENST00000261367 PLXNC1O60486 1568 aa9.79□□□□□ -0.84
SNCAIP-201ENST00000261367 FOXD4L6Q3SYB3 417 aaPredicted RBP9.79□□□□□ -0.84
SNCAIP-201ENST00000261367 FOXD4L3Q6VB84 417 aaPredicted RBP9.79□□□□□ -0.84
SNCAIP-201ENST00000261367 NUTM1Q86Y26 1132 aa9.79□□□□□ -0.84
SNCAIP-201ENST00000261367 PANK2Q9BZ23 570 aa9.79□□□□□ -0.84
SNCAIP-201ENST00000261367 CLIP2Q9UDT6 1046 aa9.79□□□□□ -0.84
SNCAIP-201ENST00000261367 MKRN1Q9UHC7 482 aaKnown RBP9.79□□□□□ -0.84
SNCAIP-201ENST00000261367 SYCP2Q9BX26 1530 aa9.79□□□□□ -0.84
SNCAIP-201ENST00000261367 GBP6Q6ZN66 633 aa9.79□□□□□ -0.84
SNCAIP-201ENST00000261367 PDILTQ8N807 584 aa9.79□□□□□ -0.84
SNCAIP-201ENST00000261367 PIBF1Q8WXW3 757 aa9.79□□□□□ -0.84
SNCAIP-201ENST00000261367 ANKRD50Q9ULJ7 1429 aa9.79□□□□□ -0.84
SNCAIP-201ENST00000261367 TRPM1Q7Z4N2 1603 aa9.79□□□□□ -0.84
SNCAIP-201ENST00000261367 ABCC2Q92887 1545 aa9.79□□□□□ -0.84
SNCAIP-201ENST00000261367 MAGI2Q86UL8 1455 aa9.79□□□□□ -0.84
SNCAIP-201ENST00000261367 ADAMTS8Q9UP79 889 aa9.78□□□□□ -0.84
SNCAIP-201ENST00000261367 FIBPO43427 364 aa9.78□□□□□ -0.84
SNCAIP-201ENST00000261367 C8orf34Q49A92 452 aa9.78□□□□□ -0.84
SNCAIP-201ENST00000261367 SKAP1Q86WV1 359 aa9.78□□□□□ -0.84
SNCAIP-201ENST00000261367 CNTROBQ8N137 903 aa9.78□□□□□ -0.84
SNCAIP-201ENST00000261367 SNW1Q13573 536 aaKnown RBP9.78□□□□□ -0.84
SNCAIP-201ENST00000261367 RNF123Q5XPI4 1314 aa9.78□□□□□ -0.84
SNCAIP-201ENST00000261367 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.78□□□□□ -0.84
SNCAIP-201ENST00000261367 C14orf37Q86TY3 774 aa9.78□□□□□ -0.84
SNCAIP-201ENST00000261367 UPF3BQ9BZI7 483 aaKnown RBP9.78□□□□□ -0.84
SNCAIP-201ENST00000261367 IQGAP3Q86VI3 1631 aa9.77□□□□□ -0.84
SNCAIP-201ENST00000261367 NPHP1O15259 732 aa9.77□□□□□ -0.85
SNCAIP-201ENST00000261367 KIF5CO60282 957 aa9.77□□□□□ -0.85
SNCAIP-201ENST00000261367 SERPINC1P01008 464 aa9.77□□□□□ -0.85
SNCAIP-201ENST00000261367 MAPK8IP2Q13387 824 aaPredicted RBP9.77□□□□□ -0.85
SNCAIP-201ENST00000261367 TUBB2AQ13885 445 aa9.77□□□□□ -0.85
SNCAIP-201ENST00000261367 NBPF11Q86T75 865 aa9.77□□□□□ -0.85
SNCAIP-201ENST00000261367 TUBB2BQ9BVA1 445 aa9.77□□□□□ -0.85
SNCAIP-201ENST00000261367 ZNHIT6Q9NWK9 470 aaKnown RBP9.77□□□□□ -0.85
SNCAIP-201ENST00000261367 UBE2HP62256 183 aa9.77□□□□□ -0.85
SNCAIP-201ENST00000261367 SH3BGRP55822 239 aaPredicted RBP9.77□□□□□ -0.85
SNCAIP-201ENST00000261367 FAM135AQ9P2D6 1515 aa9.77□□□□□ -0.85
SNCAIP-201ENST00000261367 GPRASP1Q5JY77 1395 aa9.76□□□□□ -0.85
SNCAIP-201ENST00000261367 SSFA2P28290 1259 aa9.76□□□□□ -0.85
SNCAIP-201ENST00000261367 GIGYF2Q6Y7W6 1299 aaKnown RBP9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms