RNA–Protein interactions for RNA: ENST00000259607.6

CCL21-201, Transcript of C-C motif chemokine ligand 21, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCL21, Length 852 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL21-201ENST00000259607 PCDH11XQ9BZA7 1347 aa13.89□□□□□ -0.19
CCL21-201ENST00000259607 PCDH11YQ9BZA8 1340 aa13.89□□□□□ -0.19
CCL21-201ENST00000259607 MTHFSP49914 203 aa13.88□□□□□ -0.19
CCL21-201ENST00000259607 DDX54Q8TDD1 881 aaKnown RBP13.87□□□□□ -0.19
CCL21-201ENST00000259607 EYA1Q99502 592 aa13.87□□□□□ -0.19
CCL21-201ENST00000259607 NCAPD2Q15021 1401 aa13.87□□□□□ -0.19
CCL21-201ENST00000259607 IGSF1Q8N6C5 1336 aa13.87□□□□□ -0.19
CCL21-201ENST00000259607 PLSCR1O15162 318 aa13.85□□□□□ -0.19
CCL21-201ENST00000259607 DIAPH1O60610 1272 aaKnown RBP13.85□□□□□ -0.19
CCL21-201ENST00000259607 AMOTQ4VCS5 1084 aa13.85□□□□□ -0.19
CCL21-201ENST00000259607 USHBP1Q8N6Y0 703 aa13.85□□□□□ -0.19
CCL21-201ENST00000259607 NUDCQ9Y266 331 aa13.85□□□□□ -0.19
CCL21-201ENST00000259607 MEGF6O75095 1541 aa13.85□□□□□ -0.19
CCL21-201ENST00000259607 HSP90AB1P08238 724 aaKnown RBP13.84□□□□□ -0.19
CCL21-201ENST00000259607 PLEKHO1Q53GL0 409 aaPredicted RBP13.84□□□□□ -0.19
CCL21-201ENST00000259607 IL13P35225 146 aa13.83□□□□□ -0.2
CCL21-201ENST00000259607 RALBP1Q15311 655 aa13.83□□□□□ -0.2
CCL21-201ENST00000259607 NBPF14Q5TI25 921 aa13.83□□□□□ -0.2
CCL21-201ENST00000259607 DEFB132Q7Z7B7 95 aa13.83□□□□□ -0.2
CCL21-201ENST00000259607 TNS1Q9HBL0 1735 aaKnown RBP13.82□□□□□ -0.2
CCL21-201ENST00000259607 RGPD2P0DJD1 1756 aa13.82□□□□□ -0.2
CCL21-201ENST00000259607 EN1Q05925 392 aaPredicted RBP13.82□□□□□ -0.2
CCL21-201ENST00000259607 CNGB1Q14028 1251 aaPredicted RBP13.82□□□□□ -0.2
CCL21-201ENST00000259607 IFNL2Q8IZJ0 200 aa13.82□□□□□ -0.2
CCL21-201ENST00000259607 DDX10Q13206 875 aaKnown RBP13.81□□□□□ -0.2
CCL21-201ENST00000259607 SULT6B1Q6IMI4 303 aa13.81□□□□□ -0.2
CCL21-201ENST00000259607 CAMKK2Q96RR4 588 aa13.81□□□□□ -0.2
CCL21-201ENST00000259607 RGPD3A6NKT7 1758 aaPredicted RBP13.81□□□□□ -0.2
CCL21-201ENST00000259607 RGPD4Q7Z3J3 1758 aa13.81□□□□□ -0.2
CCL21-201ENST00000259607 NHSQ6T4R5 1651 aa13.8□□□□□ -0.2
CCL21-201ENST00000259607 C1orf141Q5JVX7 400 aa13.8□□□□□ -0.2
CCL21-201ENST00000259607 SYTL4Q96C24 671 aaPredicted RBP13.8□□□□□ -0.2
CCL21-201ENST00000259607 SBF2Q86WG5 1849 aa13.8□□□□□ -0.2
CCL21-201ENST00000259607 KDRP35968 1356 aa13.8□□□□□ -0.2
CCL21-201ENST00000259607 PPP2R1AP30153 589 aa13.79□□□□□ -0.2
CCL21-201ENST00000259607 PKD1L3Q7Z443 1732 aa13.78□□□□□ -0.2
CCL21-201ENST00000259607 NEFMP07197 916 aa13.78□□□□□ -0.2
CCL21-201ENST00000259607 NKX1-1Q15270 411 aaPredicted RBP13.78□□□□□ -0.2
CCL21-201ENST00000259607 EZH2Q15910 746 aaKnown RBP13.78□□□□□ -0.2
CCL21-201ENST00000259607 ACSBG1Q96GR2 724 aa13.78□□□□□ -0.2
CCL21-201ENST00000259607 PNNQ9H307 717 aaKnown RBP13.78□□□□□ -0.2
CCL21-201ENST00000259607 ZNF316A6NFI3 1004 aaPredicted RBP13.77□□□□□ -0.21
CCL21-201ENST00000259607 U2SURPO15042 1029 aaKnown RBP13.77□□□□□ -0.21
CCL21-201ENST00000259607 PRIM1P49642 420 aaKnown RBP13.77□□□□□ -0.21
CCL21-201ENST00000259607 SLC27A3Q5K4L6 730 aa13.77□□□□□ -0.21
CCL21-201ENST00000259607 DCAF5Q96JK2 942 aa13.77□□□□□ -0.21
CCL21-201ENST00000259607 CYP27B1O15528 508 aa13.76□□□□□ -0.21
CCL21-201ENST00000259607 KCNQ2O43526 872 aa13.76□□□□□ -0.21
CCL21-201ENST00000259607 PHKG2P15735 406 aa13.76□□□□□ -0.21
CCL21-201ENST00000259607 ZNF530Q6P9A1 599 aaPredicted RBP13.76□□□□□ -0.21
CCL21-201ENST00000259607 SMARCC1Q92922 1105 aaPredicted RBP13.76□□□□□ -0.21
CCL21-201ENST00000259607 ERVV-2B6SEH9 535 aa13.75□□□□□ -0.21
CCL21-201ENST00000259607 TMOD3Q9NYL9 352 aa13.75□□□□□ -0.21
CCL21-201ENST00000259607 SHANK3Q9BYB0 1731 aa13.74□□□□□ -0.21
CCL21-201ENST00000259607 TXNRD1Q16881 649 aa13.74□□□□□ -0.21
CCL21-201ENST00000259607 AKAP4Q5JQC9 854 aa13.74□□□□□ -0.21
CCL21-201ENST00000259607 GAS2L2Q8NHY3 880 aa13.74□□□□□ -0.21
CCL21-201ENST00000259607 KAT6BQ8WYB5 2073 aa13.73□□□□□ -0.21
CCL21-201ENST00000259607 MYBBP1AQ9BQG0 1328 aaKnown RBP13.73□□□□□ -0.21
CCL21-201ENST00000259607 FCHSD2O94868 740 aa13.73□□□□□ -0.21
CCL21-201ENST00000259607 HMOX1P09601 288 aa13.73□□□□□ -0.21
CCL21-201ENST00000259607 U2AF1L5P0DN76 240 aaPredicted RBP13.73□□□□□ -0.21
CCL21-201ENST00000259607 U2AF1Q01081 240 aaKnown RBP eCLIP13.73□□□□□ -0.21
CCL21-201ENST00000259607 AEBP1Q8IUX7 1158 aa13.73□□□□□ -0.21
CCL21-201ENST00000259607 COL3A1P02461 1466 aaPredicted RBP13.73□□□□□ -0.21
CCL21-201ENST00000259607 DOT1LQ8TEK3 1739 aa13.73□□□□□ -0.21
CCL21-201ENST00000259607 RREB1Q92766 1687 aa13.72□□□□□ -0.21
CCL21-201ENST00000259607 MPRIPQ6WCQ1 1025 aa13.72□□□□□ -0.21
CCL21-201ENST00000259607 STK32BQ9NY57 414 aa13.72□□□□□ -0.21
CCL21-201ENST00000259607 BTAF1O14981 1849 aa13.71□□□□□ -0.21
CCL21-201ENST00000259607 CABP4P57796 275 aa13.7□□□□□ -0.22
CCL21-201ENST00000259607 PTF1AQ7RTS3 328 aa13.69□□□□□ -0.22
CCL21-201ENST00000259607 NUP188Q5SRE5 1749 aa13.68□□□□□ -0.22
CCL21-201ENST00000259607 R3HDM1Q15032 1099 aaKnown RBP13.68□□□□□ -0.22
CCL21-201ENST00000259607 CCNL1Q9UK58 526 aaPredicted RBP13.68□□□□□ -0.22
CCL21-201ENST00000259607 PALLDQ8WX93 1383 aa13.68□□□□□ -0.22
CCL21-201ENST00000259607 GNAT3A8MTJ3 354 aa13.67□□□□□ -0.22
CCL21-201ENST00000259607 PRKAR2BP31323 418 aa13.67□□□□□ -0.22
CCL21-201ENST00000259607 PROM2Q8N271 834 aa13.67□□□□□ -0.22
CCL21-201ENST00000259607 PIGBQ92521 554 aa13.67□□□□□ -0.22
CCL21-201ENST00000259607 RTF1Q92541 710 aaKnown RBP13.67□□□□□ -0.22
CCL21-201ENST00000259607 RSPH6AQ9H0K4 717 aa13.67□□□□□ -0.22
CCL21-201ENST00000259607 PRKRIP1Q9H875 184 aaPredicted RBP13.67□□□□□ -0.22
CCL21-201ENST00000259607 MAPK8IP3Q9UPT6 1336 aa13.66□□□□□ -0.22
CCL21-201ENST00000259607 ANP32CO43423 234 aa13.66□□□□□ -0.22
CCL21-201ENST00000259607 MAPK8IP2Q13387 824 aaPredicted RBP13.66□□□□□ -0.22
CCL21-201ENST00000259607 WDR43Q15061 677 aaKnown RBP eCLIP13.66□□□□□ -0.22
CCL21-201ENST00000259607 SLC15A2Q16348 729 aa13.66□□□□□ -0.22
CCL21-201ENST00000259607 MTHFSDQ2M296 383 aaKnown RBP13.66□□□□□ -0.22
CCL21-201ENST00000259607 MAP3K5Q99683 1374 aa13.66□□□□□ -0.22
CCL21-201ENST00000259607 PSDA5PKW4 1024 aaPredicted RBP13.65□□□□□ -0.22
CCL21-201ENST00000259607 HTATSF1O43719 755 aaKnown RBP13.65□□□□□ -0.22
CCL21-201ENST00000259607 FLAD1Q8NFF5 587 aa13.65□□□□□ -0.22
CCL21-201ENST00000259607 TEFQ10587 303 aa13.64□□□□□ -0.23
CCL21-201ENST00000259607 ITGB4P16144 1822 aa13.64□□□□□ -0.23
CCL21-201ENST00000259607 LY75O60449 1722 aa13.64□□□□□ -0.23
CCL21-201ENST00000259607 LOC102724428A0A0B4J2F2 783 aa13.63□□□□□ -0.23
CCL21-201ENST00000259607 RNMTO43148 476 aaKnown RBP13.63□□□□□ -0.23
CCL21-201ENST00000259607 SIK1P57059 783 aa13.63□□□□□ -0.23
CCL21-201ENST00000259607 NFATC2IPQ8NCF5 419 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms