RNA–Protein interactions for RNA: ENST00000259229.6

CCDC115-201, Transcript of coiled-coil domain containing 115, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC115, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC115-201ENST00000259229 SLIT2O94813 1529 aa23.21■■□□□ 1.31
CCDC115-201ENST00000259229 CRB1P82279 1406 aa23.21■■□□□ 1.31
CCDC115-201ENST00000259229 DCTN1Q14203 1278 aa23.21■■□□□ 1.31
CCDC115-201ENST00000259229 LARP1Q6PKG0 1096 aaKnown RBP23.21■■□□□ 1.31
CCDC115-201ENST00000259229 SHANK3Q9BYB0 1731 aa23.21■■□□□ 1.31
CCDC115-201ENST00000259229 MAP3K5Q99683 1374 aa23.2■■□□□ 1.3
CCDC115-201ENST00000259229 OVOS2A0A0G2JMS6 1433 aa23.19■■□□□ 1.3
CCDC115-201ENST00000259229 ADAMTS2O95450 1211 aa23.19■■□□□ 1.3
CCDC115-201ENST00000259229 NUTM2BA6NNL0 878 aaPredicted RBP23.19■■□□□ 1.3
CCDC115-201ENST00000259229 NUTM2EB1AL46 878 aaPredicted RBP23.19■■□□□ 1.3
CCDC115-201ENST00000259229 TOM1L2Q6ZVM7 507 aa23.19■■□□□ 1.3
CCDC115-201ENST00000259229 NUTM2AQ8IVF1 878 aaPredicted RBP23.19■■□□□ 1.3
CCDC115-201ENST00000259229 CARD10Q9BWT7 1032 aa23.19■■□□□ 1.3
CCDC115-201ENST00000259229 STRN4Q9NRL3 753 aa23.19■■□□□ 1.3
CCDC115-201ENST00000259229 FANCIQ9NVI1 1328 aa23.18■■□□□ 1.3
CCDC115-201ENST00000259229 MCM10Q7L590 875 aa23.18■■□□□ 1.3
CCDC115-201ENST00000259229 SPATA31A6Q5VVP1 1343 aa23.17■■□□□ 1.3
CCDC115-201ENST00000259229 ZNF853P0CG23 659 aa23.17■■□□□ 1.3
CCDC115-201ENST00000259229 AMOTQ4VCS5 1084 aa23.16■■□□□ 1.3
CCDC115-201ENST00000259229 HTATSF1O43719 755 aaKnown RBP23.15■■□□□ 1.3
CCDC115-201ENST00000259229 PLEKHO1Q53GL0 409 aaPredicted RBP23.15■■□□□ 1.3
CCDC115-201ENST00000259229 RAPGEF4Q8WZA2 1011 aa23.15■■□□□ 1.3
CCDC115-201ENST00000259229 TSR2Q969E8 191 aaKnown RBP23.15■■□□□ 1.3
CCDC115-201ENST00000259229 SUPT16HQ9Y5B9 1047 aaKnown RBP23.15■■□□□ 1.3
CCDC115-201ENST00000259229 GNAT3A8MTJ3 354 aa23.15■■□□□ 1.3
CCDC115-201ENST00000259229 MYH16Q9H6N6 1097 aa23.15■■□□□ 1.3
CCDC115-201ENST00000259229 RNF123Q5XPI4 1314 aa23.14■■□□□ 1.3
CCDC115-201ENST00000259229 DISP2A7MBM2 1401 aa23.14■■□□□ 1.29
CCDC115-201ENST00000259229 TATP17735 454 aaPredicted RBP23.14■■□□□ 1.29
CCDC115-201ENST00000259229 EVA1CP58658 441 aa23.14■■□□□ 1.29
CCDC115-201ENST00000259229 CALD1Q05682 793 aaKnown RBP23.14■■□□□ 1.29
CCDC115-201ENST00000259229 IFT57Q9NWB7 429 aa23.14■■□□□ 1.29
CCDC115-201ENST00000259229 CEMIPQ8WUJ3 1361 aa23.14■■□□□ 1.29
CCDC115-201ENST00000259229 SIPA1L3O60292 1781 aaPredicted RBP23.14■■□□□ 1.29
CCDC115-201ENST00000259229 SCN11AQ9UI33 1791 aa23.14■■□□□ 1.29
CCDC115-201ENST00000259229 ZNF530Q6P9A1 599 aaPredicted RBP23.13■■□□□ 1.29
CCDC115-201ENST00000259229 RCAN3Q9UKA8 241 aa23.13■■□□□ 1.29
CCDC115-201ENST00000259229 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.13■■□□□ 1.29
CCDC115-201ENST00000259229 IL17REQ8NFR9 667 aa23.12■■□□□ 1.29
CCDC115-201ENST00000259229 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.12■■□□□ 1.29
CCDC115-201ENST00000259229 AKAP4Q5JQC9 854 aa23.11■■□□□ 1.29
CCDC115-201ENST00000259229 CFAP44Q96MT7 982 aa23.11■■□□□ 1.29
CCDC115-201ENST00000259229 RTF1Q92541 710 aaKnown RBP23.1■■□□□ 1.29
CCDC115-201ENST00000259229 BCL9LQ86UU0 1499 aa23.09■■□□□ 1.29
CCDC115-201ENST00000259229 GNAI1P63096 354 aa23.09■■□□□ 1.29
CCDC115-201ENST00000259229 MBIPQ9NS73 344 aa23.09■■□□□ 1.29
CCDC115-201ENST00000259229 KDM3BQ7LBC6 1761 aa23.09■■□□□ 1.29
CCDC115-201ENST00000259229 KDM6AO15550 1401 aaPredicted RBP23.09■■□□□ 1.29
CCDC115-201ENST00000259229 IL2RBP14784 551 aa23.08■■□□□ 1.28
CCDC115-201ENST00000259229 GTF3C3Q9Y5Q9 886 aa23.08■■□□□ 1.28
CCDC115-201ENST00000259229 CHL1O00533 1208 aa23.07■■□□□ 1.28
CCDC115-201ENST00000259229 EXOSC9Q06265 439 aaKnown RBP23.07■■□□□ 1.28
CCDC115-201ENST00000259229 LGR6Q9HBX8 967 aa23.07■■□□□ 1.28
CCDC115-201ENST00000259229 SPG7Q9UQ90 795 aa23.07■■□□□ 1.28
CCDC115-201ENST00000259229 LAS1LQ9Y4W2 734 aaKnown RBP23.07■■□□□ 1.28
CCDC115-201ENST00000259229 CYP27B1O15528 508 aa23.06■■□□□ 1.28
CCDC115-201ENST00000259229 PHKG2P15735 406 aa23.06■■□□□ 1.28
CCDC115-201ENST00000259229 MRC1P22897 1456 aa23.06■■□□□ 1.28
CCDC115-201ENST00000259229 C1orf141Q5JVX7 400 aa23.05■■□□□ 1.28
CCDC115-201ENST00000259229 USP35Q9P2H5 1018 aa23.05■■□□□ 1.28
CCDC115-201ENST00000259229 SPATA31A1Q5TZJ5 1347 aa23.05■■□□□ 1.28
CCDC115-201ENST00000259229 FNBP4Q8N3X1 1017 aaPredicted RBP23.04■■□□□ 1.28
CCDC115-201ENST00000259229 C8orf37Q96NL8 207 aa23.04■■□□□ 1.28
CCDC115-201ENST00000259229 RNMTO43148 476 aaKnown RBP23.04■■□□□ 1.28
CCDC115-201ENST00000259229 MPRIPQ6WCQ1 1025 aa23.04■■□□□ 1.28
CCDC115-201ENST00000259229 TOGARAM1Q9Y4F4 1720 aa23.03■■□□□ 1.28
CCDC115-201ENST00000259229 SPATA31A5Q5VU36 1347 aa23.03■■□□□ 1.28
CCDC115-201ENST00000259229 SPATA31A7Q8IWB4 1347 aa23.03■■□□□ 1.28
CCDC115-201ENST00000259229 UNC5CLQ8IV45 518 aa23.02■■□□□ 1.28
CCDC115-201ENST00000259229 RRP1P56182 461 aaKnown RBP23.01■■□□□ 1.27
CCDC115-201ENST00000259229 IFNL2Q8IZJ0 200 aa23.01■■□□□ 1.27
CCDC115-201ENST00000259229 ZCRB1Q8TBF4 217 aaKnown RBP23.01■■□□□ 1.27
CCDC115-201ENST00000259229 PCDH11XQ9BZA7 1347 aa23.01■■□□□ 1.27
CCDC115-201ENST00000259229 PCDH11YQ9BZA8 1340 aa23.01■■□□□ 1.27
CCDC115-201ENST00000259229 CT47B1P0C2W7 299 aaPredicted RBP23■■□□□ 1.27
CCDC115-201ENST00000259229 NGLY1Q96IV0 654 aa23■■□□□ 1.27
CCDC115-201ENST00000259229 MIS18AQ9NYP9 233 aa23■■□□□ 1.27
CCDC115-201ENST00000259229 TNS2Q63HR2 1409 aa22.99■■□□□ 1.27
CCDC115-201ENST00000259229 RARSP54136 660 aaKnown RBP22.99■■□□□ 1.27
CCDC115-201ENST00000259229 TSPYL6Q8N831 410 aa22.99■■□□□ 1.27
CCDC115-201ENST00000259229 TAF7Q15545 349 aaPredicted RBP22.98■■□□□ 1.27
CCDC115-201ENST00000259229 BABAM1Q9NWV8 329 aa22.98■■□□□ 1.27
CCDC115-201ENST00000259229 THRAP3Q9Y2W1 955 aaKnown RBP22.98■■□□□ 1.27
CCDC115-201ENST00000259229 BCAR3O75815 825 aa22.97■■□□□ 1.27
CCDC115-201ENST00000259229 C8orf58Q8NAV2 365 aa22.97■■□□□ 1.27
CCDC115-201ENST00000259229 TSPYL4Q9UJ04 414 aa22.97■■□□□ 1.27
CCDC115-201ENST00000259229 VPS72Q15906 364 aa22.97■■□□□ 1.27
CCDC115-201ENST00000259229 NKX1-1Q15270 411 aaPredicted RBP22.96■■□□□ 1.27
CCDC115-201ENST00000259229 KRT24Q2M2I5 525 aa22.96■■□□□ 1.27
CCDC115-201ENST00000259229 DCAF5Q96JK2 942 aa22.96■■□□□ 1.27
CCDC115-201ENST00000259229 GLI3P10071 1580 aa22.95■■□□□ 1.27
CCDC115-201ENST00000259229 THSD7AQ9UPZ6 1657 aa22.95■■□□□ 1.26
CCDC115-201ENST00000259229 PAPPAQ13219 1627 aa22.95■■□□□ 1.26
CCDC115-201ENST00000259229 VAMP4O75379 141 aa22.95■■□□□ 1.26
CCDC115-201ENST00000259229 IRX6P78412 446 aaPredicted RBP22.95■■□□□ 1.26
CCDC115-201ENST00000259229 BARGINQ6ZT62 677 aa22.94■■□□□ 1.26
CCDC115-201ENST00000259229 HSP90AB1P08238 724 aaKnown RBP22.93■■□□□ 1.26
CCDC115-201ENST00000259229 TEFQ10587 303 aa22.93■■□□□ 1.26
CCDC115-201ENST00000259229 FKBP8Q14318 412 aa22.93■■□□□ 1.26
CCDC115-201ENST00000259229 PLIN1O60240 522 aa22.93■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms