RNA–Protein interactions for RNA: ENST00000257909.7

TROAP-201, Transcript of trophinin associated protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TROAP, Length 2,527 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-201ENST00000257909 TERF2IPQ9NYB0 399 aa14.01□□□□□ -0.17
TROAP-201ENST00000257909 ZSCAN20P17040 1043 aaPredicted RBP14.01□□□□□ -0.17
TROAP-201ENST00000257909 SDSP20132 328 aa14.01□□□□□ -0.17
TROAP-201ENST00000257909 BRD1O95696 1058 aa14□□□□□ -0.17
TROAP-201ENST00000257909 GTPBP4Q9BZE4 634 aaKnown RBP14□□□□□ -0.17
TROAP-201ENST00000257909 PRDM10Q9NQV6 1147 aa14□□□□□ -0.17
TROAP-201ENST00000257909 KNDC1Q76NI1 1749 aa14□□□□□ -0.17
TROAP-201ENST00000257909 ERC2O15083 957 aa14□□□□□ -0.17
TROAP-201ENST00000257909 PDIA4P13667 645 aaKnown RBP14□□□□□ -0.17
TROAP-201ENST00000257909 NFE2L2Q16236 605 aa14□□□□□ -0.17
TROAP-201ENST00000257909 TSPYL6Q8N831 410 aa14□□□□□ -0.17
TROAP-201ENST00000257909 PRKAR2BP31323 418 aa13.99□□□□□ -0.17
TROAP-201ENST00000257909 NOLC1Q14978 699 aaKnown RBP eCLIP13.99□□□□□ -0.17
TROAP-201ENST00000257909 ATAD2Q6PL18 1390 aa13.99□□□□□ -0.17
TROAP-201ENST00000257909 TWISTNBQ3B726 338 aaPredicted RBP13.99□□□□□ -0.17
TROAP-201ENST00000257909 RPAP2Q8IXW5 612 aaPredicted RBP13.99□□□□□ -0.17
TROAP-201ENST00000257909 ANKRD44Q8N8A2 993 aa13.99□□□□□ -0.17
TROAP-201ENST00000257909 C16orf71Q8IYS4 520 aaPredicted RBP13.98□□□□□ -0.17
TROAP-201ENST00000257909 TMX3Q96JJ7 454 aa13.98□□□□□ -0.17
TROAP-201ENST00000257909 ZNF853P0CG23 659 aa13.98□□□□□ -0.17
TROAP-201ENST00000257909 NUTM2DQ5VT03 806 aaPredicted RBP13.98□□□□□ -0.17
TROAP-201ENST00000257909 INTS4Q96HW7 963 aaKnown RBP13.98□□□□□ -0.17
TROAP-201ENST00000257909 ZHX1Q9UKY1 873 aaPredicted RBP13.98□□□□□ -0.17
TROAP-201ENST00000257909 KIF3AQ9Y496 699 aa13.98□□□□□ -0.17
TROAP-201ENST00000257909 POGZQ7Z3K3 1410 aa13.97□□□□□ -0.17
TROAP-201ENST00000257909 SRPK2P78362 688 aaKnown RBP13.97□□□□□ -0.17
TROAP-201ENST00000257909 CUL4AQ13619 759 aa13.97□□□□□ -0.17
TROAP-201ENST00000257909 MBIPQ9NS73 344 aa13.97□□□□□ -0.17
TROAP-201ENST00000257909 VGFO15240 615 aaPredicted RBP13.97□□□□□ -0.17
TROAP-201ENST00000257909 KIF20AO95235 890 aa13.97□□□□□ -0.17
TROAP-201ENST00000257909 ZNF710Q8N1W2 664 aa13.97□□□□□ -0.17
TROAP-201ENST00000257909 CHAMP1Q96JM3 812 aa13.97□□□□□ -0.17
TROAP-201ENST00000257909 NEK4P51957 841 aa13.96□□□□□ -0.17
TROAP-201ENST00000257909 SPTLC3Q9NUV7 552 aa13.96□□□□□ -0.17
TROAP-201ENST00000257909 FKBP5Q13451 457 aaPredicted RBP13.96□□□□□ -0.18
TROAP-201ENST00000257909 FOXD4L5Q5VV16 416 aaPredicted RBP13.96□□□□□ -0.18
TROAP-201ENST00000257909 FOXD4L4Q8WXT5 416 aaPredicted RBP13.96□□□□□ -0.18
TROAP-201ENST00000257909 ELL2O00472 640 aaPredicted RBP13.95□□□□□ -0.18
TROAP-201ENST00000257909 GGT6Q6P531 493 aa13.95□□□□□ -0.18
TROAP-201ENST00000257909 ATP10DQ9P241 1426 aa13.95□□□□□ -0.18
TROAP-201ENST00000257909 MLH3Q9UHC1 1453 aa13.95□□□□□ -0.18
TROAP-201ENST00000257909 LETM1O95202 739 aaPredicted RBP13.95□□□□□ -0.18
TROAP-201ENST00000257909 LMOD3Q0VAK6 560 aa13.95□□□□□ -0.18
TROAP-201ENST00000257909 KLHL34Q8N239 644 aa13.95□□□□□ -0.18
TROAP-201ENST00000257909 OTUD7AQ8TE49 926 aaPredicted RBP13.95□□□□□ -0.18
TROAP-201ENST00000257909 KIF20BQ96Q89 1820 aa13.95□□□□□ -0.18
TROAP-201ENST00000257909 MCCP23508 829 aa13.94□□□□□ -0.18
TROAP-201ENST00000257909 HDGFL2Q7Z4V5 671 aaPredicted RBP13.94□□□□□ -0.18
TROAP-201ENST00000257909 CD163L1Q9NR16 1453 aa13.94□□□□□ -0.18
TROAP-201ENST00000257909 CLTCQ00610 1675 aaKnown RBP13.94□□□□□ -0.18
TROAP-201ENST00000257909 CEP85Q6P2H3 762 aa13.94□□□□□ -0.18
TROAP-201ENST00000257909 THUMPD2Q9BTF0 503 aaKnown RBP13.94□□□□□ -0.18
TROAP-201ENST00000257909 ANAPC15P60006 121 aa13.93□□□□□ -0.18
TROAP-201ENST00000257909 PPP4R3BQ5MIZ7 849 aa13.93□□□□□ -0.18
TROAP-201ENST00000257909 OSBPL3Q9H4L5 887 aa13.93□□□□□ -0.18
TROAP-201ENST00000257909 HAP1P54257 671 aaPredicted RBP13.93□□□□□ -0.18
TROAP-201ENST00000257909 CBX1P83916 185 aa13.93□□□□□ -0.18
TROAP-201ENST00000257909 SAFB2Q14151 953 aaKnown RBP eCLIP13.93□□□□□ -0.18
TROAP-201ENST00000257909 PHACTR3Q96KR7 559 aa13.93□□□□□ -0.18
TROAP-201ENST00000257909 USP25Q9UHP3 1055 aa13.93□□□□□ -0.18
TROAP-201ENST00000257909 ADCY5O95622 1261 aa13.92□□□□□ -0.18
TROAP-201ENST00000257909 CCDC183Q5T5S1 534 aa13.92□□□□□ -0.18
TROAP-201ENST00000257909 C8orf58Q8NAV2 365 aa13.92□□□□□ -0.18
TROAP-201ENST00000257909 BCL11BQ9C0K0 894 aaPredicted RBP13.92□□□□□ -0.18
TROAP-201ENST00000257909 DIAPH3Q9NSV4 1193 aa13.92□□□□□ -0.18
TROAP-201ENST00000257909 WDR33Q9C0J8 1336 aaKnown RBP13.92□□□□□ -0.18
TROAP-201ENST00000257909 PTPRMP28827 1452 aa13.92□□□□□ -0.18
TROAP-201ENST00000257909 TPM3P06753 285 aa13.91□□□□□ -0.18
TROAP-201ENST00000257909 CHAF1AQ13111 956 aaPredicted RBP13.91□□□□□ -0.18
TROAP-201ENST00000257909 TMEM87AQ8NBN3 555 aa13.91□□□□□ -0.18
TROAP-201ENST00000257909 ZNF830Q96NB3 372 aaPredicted RBP13.91□□□□□ -0.18
TROAP-201ENST00000257909 RTL1A6NKG5 1358 aa13.91□□□□□ -0.18
TROAP-201ENST00000257909 USP48Q86UV5 1035 aa13.91□□□□□ -0.18
TROAP-201ENST00000257909 SENP3Q9H4L4 574 aaPredicted RBP13.91□□□□□ -0.18
TROAP-201ENST00000257909 TTC12Q9H892 705 aaPredicted RBP13.91□□□□□ -0.18
TROAP-201ENST00000257909 BCL2L12Q9HB09 334 aa13.91□□□□□ -0.18
TROAP-201ENST00000257909 DIP2CQ9Y2E4 1556 aa13.9□□□□□ -0.18
TROAP-201ENST00000257909 SMARCA5O60264 1052 aaPredicted RBP13.9□□□□□ -0.18
TROAP-201ENST00000257909 HMMRO75330 724 aa13.9□□□□□ -0.18
TROAP-201ENST00000257909 PDCL2Q8N4E4 241 aa13.9□□□□□ -0.18
TROAP-201ENST00000257909 TSC1Q92574 1164 aa13.9□□□□□ -0.18
TROAP-201ENST00000257909 JARID2Q92833 1246 aaPredicted RBP13.9□□□□□ -0.18
TROAP-201ENST00000257909 POLKQ9UBT6 870 aa13.9□□□□□ -0.18
TROAP-201ENST00000257909 ARHGEF40Q8TER5 1519 aa13.9□□□□□ -0.18
TROAP-201ENST00000257909 CPSF1Q10570 1443 aaKnown RBP13.9□□□□□ -0.18
TROAP-201ENST00000257909 GADD45BO75293 160 aaPredicted RBP13.9□□□□□ -0.18
TROAP-201ENST00000257909 HMOX1P09601 288 aa13.9□□□□□ -0.18
TROAP-201ENST00000257909 ATP2B3Q16720 1220 aa13.9□□□□□ -0.18
TROAP-201ENST00000257909 ZBTB7CA1YPR0 619 aa13.89□□□□□ -0.19
TROAP-201ENST00000257909 MX1P20591 662 aa13.89□□□□□ -0.19
TROAP-201ENST00000257909 IL17RAQ96F46 866 aa13.89□□□□□ -0.19
TROAP-201ENST00000257909 RGS12O14924 1447 aa13.89□□□□□ -0.19
TROAP-201ENST00000257909 RIMS2Q9UQ26 1411 aa13.89□□□□□ -0.19
TROAP-201ENST00000257909 DLG5Q8TDM6 1919 aa13.89□□□□□ -0.19
TROAP-201ENST00000257909 KDM4AO75164 1064 aa13.89□□□□□ -0.19
TROAP-201ENST00000257909 PDE1AP54750 535 aa13.89□□□□□ -0.19
TROAP-201ENST00000257909 ESYT1Q9BSJ8 1104 aa13.89□□□□□ -0.19
TROAP-201ENST00000257909 SSH2Q76I76 1423 aa13.88□□□□□ -0.19
TROAP-201ENST00000257909 APBB1O00213 710 aa13.88□□□□□ -0.19
TROAP-201ENST00000257909 TMEM131LA2VDJ0 1609 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms